Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C2orf76 Gene 0 25.24 24.45 32.74 14.92 32.62 30.76 20.15 18.50 12.25 14.53 53.49 20.67 15.60 22.06 41.51 43.47 53.07 7.48 26.55 15.63 21.85 33.15 22.25 2 334816 Transcript 0 0.00 0.00 0.00 0.00 0.00 1.38 0.00 0.00 0.00 0.00 1.45 0.00 0.00 1.22 0.73 8.17 0.00 0.00 3.98 0.00 0.00 1.04 4.40 3 498049 Transcript 0 0.83 0.59 0.36 0.80 0.53 0.00 1.30 1.27 1.62 0.34 0.96 0.78 5.18 1.25 0.81 0.59 1.30 0.52 0.63 0.63 0.87 0.00 0.00 4 414534 Transcript 0 1.92 0.09 0.00 0.00 1.22 0.00 4.67 0.35 1.90 0.29 1.19 0.00 3.84 2.09 1.32 3.65 3.36 0.67 0.87 0.00 0.45 1.56 0.00 5 409466 Transcript 0 0.00 1.02 0.61 0.00 1.34 0.61 0.88 0.00 0.00 0.38 0.00 0.00 1.56 0.00 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 6 409877 Transcript 0 4.01 0.00 0.00 0.10 0.00 1.70 0.00 0.00 0.00 0.08 0.00 0.00 0.00 2.25 0.00 0.00 4.03 0.00 0.00 0.61 1.42 0.00 1.47 7 409523 Transcript 0 0.00 0.00 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.49 4.59 0.00 3.85 0.00 0.00 0.00 0.00 0.00 2.57 0.00 8 IG18 Intergenic 0 1.17 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 10.71 0.00 2.14 2.12 3.41 8.24 5.49 0.00 0.00 0.00 0.00 0.00 0.00 9 IG18_SR1 SilentIntergenicRegion 0 1.20 0.00 0.00 0.00 3.03 0.00 0.00 0.00 0.00 0.00 10.93 0.00 2.19 2.17 3.48 8.42 5.61 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.38 0.00 0.00 0.00 0.00 1.45 0.00 0.00 1.22 0.73 8.17 0.00 0.00 3.98 0.00 0.00 1.04 4.40 11 ER1b ExonRegion 1 113.51 112.72 39.11 22.43 86.62 126.58 52.84 24.74 13.87 17.47 101.84 5.20 6.03 67.10 149.79 214.16 160.71 22.07 134.51 36.53 51.31 78.04 150.86 12 E1a_E4a KnownJunction 1 403.78 402.56 104.25 61.76 292.11 398.58 178.59 62.43 39.93 42.93 286.65 12.30 26.30 170.58 432.66 499.19 453.11 46.84 377.89 118.06 172.42 227.60 392.76 13 E2_Aa NovelBoundary 0 3.48 0.00 0.00 0.00 12.56 17.38 6.71 0.00 3.59 0.00 0.00 0.00 0.00 2.41 6.30 8.12 0.00 4.02 9.60 6.26 3.09 0.00 0.00 14 ER2a ExonRegion 0 3.85 0.18 0.00 0.00 2.43 0.00 3.25 0.71 0.39 0.57 2.37 0.00 7.67 1.70 2.64 7.30 1.95 1.34 1.74 0.00 0.90 0.00 0.00 15 ER2b ExonRegion 0 12.63 1.66 1.29 0.00 3.66 1.28 7.68 1.73 1.36 2.87 11.40 3.25 7.04 9.66 11.07 15.21 10.89 5.27 7.17 0.00 1.54 0.00 2.06 16 E2_Ac KnownBoundary 0 7.04 0.00 2.99 1.33 0.00 2.33 1.68 1.85 1.19 1.61 7.00 18.16 0.00 2.24 13.35 3.59 9.54 1.62 3.58 0.00 0.00 0.00 3.50 17 ER2c ExonRegion 0 9.13 1.28 4.57 1.76 4.01 3.21 4.66 2.85 3.28 2.31 10.95 3.80 1.66 11.20 13.95 14.62 8.33 4.12 5.23 3.13 5.06 0.25 1.96 18 E2_Da KnownBoundary 0 3.78 0.00 5.23 1.53 3.23 5.28 5.79 1.81 1.62 1.26 10.16 0.00 0.00 2.18 0.00 16.41 8.70 0.00 0.00 2.94 5.87 0.00 0.00 19 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 6.09 0.00 3.41 0.00 0.00 0.00 0.00 2.47 0.00 0.00 4.77 0.00 0.00 0.00 0.00 3.12 0.00 20 E2_Db KnownBoundary 0 0.00 0.00 11.29 2.03 19.86 0.00 5.74 2.55 3.33 1.67 0.00 0.00 0.00 6.65 0.00 7.52 8.88 0.00 0.00 0.00 2.66 0.00 0.00 21 E2b_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER2d ExonRegion 0 2.12 0.00 16.85 5.45 21.41 6.88 11.25 4.32 4.01 3.44 15.46 0.00 4.69 16.24 11.61 19.32 13.20 0.00 6.37 4.26 8.81 0.00 0.00 23 ER2e ExonRegion 0 1.21 1.38 9.36 1.62 16.63 2.98 6.57 2.93 3.29 0.89 6.06 0.00 8.82 15.66 7.81 11.18 9.81 0.00 4.46 2.52 4.14 1.14 0.04 24 E2_Dc NovelBoundary 0 0.00 0.00 2.72 7.33 4.07 0.00 10.42 6.20 3.12 3.98 20.22 32.86 13.64 24.78 23.73 20.68 0.00 0.00 4.80 15.02 3.15 0.00 4.35 25 E2c_E3a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 26 E2c_E4a KnownJunction 0 0.00 0.00 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.49 4.59 0.00 3.85 0.00 0.00 0.00 0.00 0.00 2.57 0.00 27 ER3a ExonRegion 0 4.23 0.00 0.00 0.19 0.00 3.41 0.00 0.00 0.00 0.16 0.00 0.00 0.00 2.09 0.00 0.00 3.30 0.00 0.00 1.22 2.83 0.00 2.94 28 ER3b ExonRegion 0 1.24 1.76 0.49 0.74 1.00 1.85 2.09 0.67 1.48 2.59 8.29 5.21 3.97 4.71 4.88 3.91 4.06 0.51 2.93 3.05 8.31 2.21 3.22 29 E3a_E4a KnownJunction 0 0.00 6.51 1.21 0.00 4.33 0.00 0.00 0.00 3.59 6.74 12.42 5.85 0.00 9.77 5.19 0.00 8.51 4.81 23.34 5.94 9.02 11.33 3.84 30 ER4a ExonRegion 1 79.29 92.20 87.84 46.95 66.25 96.12 50.66 57.54 36.25 40.26 205.97 25.29 37.04 48.51 95.18 143.71 243.72 23.71 112.41 55.94 101.83 76.16 98.75 31 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.82 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E4a_E6a KnownJunction 1 36.90 18.75 131.28 76.65 20.29 35.15 19.39 106.30 39.35 63.90 382.83 32.41 40.74 86.23 176.90 434.16 599.81 27.94 298.55 114.35 247.36 214.07 293.39 33 E4a_E7a NovelJunction 0 0.00 0.00 13.13 11.02 8.06 0.00 1.63 6.94 1.79 8.92 45.96 0.00 0.00 2.24 4.45 8.29 7.67 0.00 19.20 8.56 2.47 15.25 7.85 34 ER5a ExonRegion 0 1.67 1.19 0.72 1.60 1.05 0.00 2.61 2.54 3.25 0.67 1.91 1.55 3.55 0.38 1.61 1.17 2.60 1.05 1.25 1.26 1.74 0.00 0.00 35 E6_Aa NovelBoundary 0 11.04 3.35 0.00 1.86 0.00 0.00 15.68 0.00 1.62 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.00 36 ER6a ExonRegion 0 25.28 12.99 107.56 60.00 44.52 38.46 32.62 77.11 36.23 42.21 201.18 43.54 46.64 82.33 239.76 316.70 294.79 27.77 171.92 72.81 125.73 173.57 180.69 37 E6_Da NovelBoundary 0 10.00 7.70 60.32 35.19 34.38 29.41 31.27 38.24 22.77 13.19 37.01 17.56 18.67 25.19 112.99 143.55 30.95 14.38 87.06 26.53 17.85 83.46 49.08 38 E6b_E7a KnownJunction 1 40.01 9.47 62.27 28.77 142.28 41.06 39.88 26.00 25.75 15.07 78.70 64.22 79.70 41.09 103.34 146.46 59.47 19.44 25.51 50.49 19.15 61.36 92.79 39 ER6b ExonRegion 1 27.94 9.63 75.97 35.07 101.50 46.09 41.48 44.59 33.68 19.42 76.29 53.97 61.28 40.93 143.32 169.41 61.84 16.63 63.07 47.66 22.92 93.20 80.86 40 ER7a ExonRegion 0 33.31 16.32 74.94 26.83 183.99 84.93 45.85 30.98 27.11 27.56 106.61 42.61 42.70 41.42 87.95 95.97 84.17 16.09 33.70 33.82 21.75 87.78 40.73 41 E7a_E8a KnownJunction 0 45.34 27.82 83.79 27.64 281.66 157.81 73.13 33.97 19.44 35.94 121.24 39.31 40.42 43.44 83.19 64.09 98.83 18.74 48.85 23.91 22.86 104.04 15.28 42 ER8a ExonRegion 0 29.84 49.05 85.58 36.70 129.97 170.48 82.96 41.59 25.92 34.59 132.62 82.68 29.86 51.97 92.20 52.74 80.87 18.25 42.30 31.19 45.82 79.17 18.05 43 E8a_E9a KnownJunction 0 30.97 80.58 69.07 43.22 8.23 26.06 25.00 55.98 21.35 36.91 96.92 68.72 39.93 43.44 85.79 39.14 85.74 10.86 39.25 29.21 21.87 89.52 16.82 44 ER9a ExonRegion 0 83.01 92.73 95.66 32.37 29.99 29.55 33.63 50.37 30.58 38.61 110.25 51.83 31.67 45.24 80.74 50.72 89.56 12.99 23.91 26.36 27.96 95.15 13.65 45 E9_Da KnownBoundary 0 73.94 59.66 117.59 36.79 59.42 15.73 27.47 56.31 23.55 36.56 109.98 30.91 39.93 38.38 79.61 44.18 78.17 15.79 14.21 26.27 25.51 85.60 16.56 46 ER9b ExonRegion 0 27.57 20.20 43.51 19.67 50.28 24.75 22.33 19.73 12.74 22.09 38.96 43.37 23.99 22.90 41.15 23.31 24.92 4.23 12.36 13.68 4.96 43.96 6.46 47 ER9c ExonRegion 0 0.00 2.03 1.23 0.00 2.68 1.22 1.77 0.00 0.00 0.76 0.00 0.00 3.13 0.00 0.00 0.00 2.20 0.00 0.00 0.00 0.00 0.00 0.00 48 IG17_AR1 ActiveIntergenicRegion 0 3.86 2.24 15.59 5.77 1.51 19.05 2.28 5.82 4.31 4.45 4.42 1.74 2.04 4.42 1.73 0.90 0.00 2.24 2.26 3.59 10.33 24.30 14.26 49 IG17_SR1 SilentIntergenicRegion 0 2.12 1.60 8.01 5.69 3.99 18.30 1.84 4.14 3.65 2.48 2.93 0.31 1.77 3.20 1.20 1.54 1.42 1.63 2.18 6.49 12.20 10.42 17.60