Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SH3RF3 Gene 0 21.08 1.59 6.66 4.21 10.07 6.30 4.64 7.61 12.62 2.81 0.00 0.06 39.51 36.47 9.61 18.92 0.17 1.65 2.58 3.67 37.73 57.06 69.73 2 418513 Transcript 0 0.00 0.00 1.22 0.71 0.00 0.00 1.39 1.18 1.94 0.60 0.00 0.00 20.62 17.98 3.33 2.71 0.00 0.00 0.84 1.77 16.32 8.62 23.93 3 309415 Transcript 0 4.94 0.21 3.14 3.59 5.25 4.88 3.50 6.22 10.90 1.90 0.00 0.00 46.44 34.85 22.11 17.82 0.00 1.34 2.66 0.44 34.75 37.87 54.70 4 444352 Transcript 0 37.19 2.70 9.27 6.43 17.62 9.50 7.47 10.01 16.00 3.78 0.00 0.12 44.22 39.26 9.88 22.69 0.11 1.12 3.02 4.18 36.48 76.94 80.35 5 IG45 Intergenic 0 0.00 0.00 1.41 0.00 0.69 0.47 0.85 1.00 1.43 0.00 0.00 0.00 6.80 19.22 7.16 3.07 0.85 2.13 0.41 2.20 11.10 6.99 16.68 6 IG45_AR1 ActiveIntergenicRegion 0 0.00 0.00 1.42 0.00 0.69 0.47 0.86 1.00 1.43 0.00 0.00 0.00 6.82 19.26 7.17 3.08 0.85 2.14 0.41 2.20 11.12 7.01 16.73 7 ER1a ExonRegion 0 0.00 0.00 1.22 0.71 0.00 0.00 1.39 1.18 1.94 0.60 0.00 0.00 20.62 17.98 3.33 2.71 0.00 0.00 0.84 1.77 16.32 8.62 23.93 8 E1_Ab KnownBoundary 0 0.00 0.00 2.93 1.80 0.00 0.00 0.00 2.01 0.00 2.93 0.00 0.00 44.80 18.72 8.90 3.93 0.00 0.00 0.00 2.43 16.56 14.27 24.33 9 ER1b ExonRegion 0 0.47 0.00 1.85 0.30 0.00 2.13 0.35 1.71 2.35 0.56 0.00 0.00 10.08 22.73 4.85 7.50 0.00 0.25 2.27 1.90 20.84 11.24 31.18 10 E1a_E2a KnownJunction 0 6.52 0.00 2.63 0.00 0.00 0.00 0.00 1.93 6.37 0.00 0.00 0.00 6.33 17.42 4.45 11.45 0.00 0.00 0.00 6.46 19.46 34.47 34.15 11 I1_SR2 SilentIntronRegion 0 1.84 0.37 3.01 0.18 0.49 0.00 1.60 1.02 3.06 0.16 0.00 0.00 4.25 0.60 0.67 1.35 0.00 0.00 0.00 0.00 1.31 0.59 15.98 12 I1_SR3 SilentIntronRegion 0 2.55 0.18 2.26 0.71 2.90 0.16 2.18 1.57 5.28 0.53 0.00 0.00 11.52 0.78 1.15 3.51 0.00 0.18 0.85 0.75 2.21 1.10 15.47 13 I1_AR3 ActiveIntronRegion 0 7.79 0.00 2.52 1.60 3.27 0.82 2.94 4.02 7.95 0.51 0.00 0.00 15.17 0.51 2.48 4.80 0.00 0.00 0.50 1.65 0.33 1.65 19.22 14 I1_SR4 SilentIntronRegion 0 7.41 0.17 5.16 3.10 6.64 1.31 3.13 4.88 7.32 0.49 0.00 0.00 19.01 1.46 0.91 7.43 0.00 0.24 1.00 0.61 2.34 1.48 19.40 15 I1_AR4 ActiveIntronRegion 0 54.53 0.58 2.51 2.80 17.24 2.13 9.53 3.79 14.55 1.51 0.00 0.00 55.10 1.11 5.24 11.30 0.00 1.19 0.62 0.41 1.67 0.85 19.95 16 I1_AR5 ActiveIntronRegion 0 17.09 4.75 2.22 2.88 9.71 1.66 1.23 1.70 6.11 2.29 0.00 0.00 39.60 0.69 1.13 3.47 0.00 1.23 0.00 1.93 5.43 1.81 15.93 17 I1_AR6 ActiveIntronRegion 0 26.03 0.00 4.90 1.50 12.31 0.18 1.32 3.46 8.03 0.00 0.00 0.00 55.81 1.62 2.90 5.94 0.00 1.85 0.00 0.21 2.86 0.63 21.44 18 I1_SR5 SilentIntronRegion 0 2.97 0.10 1.21 0.70 1.81 0.31 1.83 1.21 2.81 0.18 0.00 0.03 17.09 1.22 0.70 3.47 0.03 0.32 0.27 0.74 2.52 0.87 12.76 19 I1_AR7 ActiveIntronRegion 0 4.47 0.00 0.00 0.63 4.71 0.00 1.50 1.59 3.12 0.00 0.00 0.00 17.58 1.84 0.00 5.04 0.00 0.08 0.98 0.98 3.18 1.28 15.61 20 I1_SR6 SilentIntronRegion 0 3.72 0.26 1.63 0.89 2.31 0.54 1.67 1.27 3.38 0.32 0.00 0.06 11.79 1.32 0.66 3.14 0.08 0.42 0.40 0.75 3.30 1.16 14.84 21 I1_AR10 ActiveIntronRegion 0 3.19 0.00 1.39 0.00 0.48 0.00 1.32 0.65 1.21 0.00 0.00 0.00 6.07 0.75 0.00 3.37 0.00 0.00 0.00 0.00 3.62 5.38 14.61 22 I1_SR10 SilentIntronRegion 0 2.36 0.10 0.92 0.22 1.05 0.17 1.95 1.21 2.31 0.16 0.00 0.00 16.83 0.82 0.23 2.00 0.00 0.03 1.00 0.23 1.73 1.08 8.75 23 I1_SR11 SilentIntronRegion 0 4.40 0.23 1.13 0.23 2.71 0.21 2.31 0.43 2.37 0.26 0.00 0.00 16.70 0.69 0.23 1.67 0.00 0.00 0.00 0.12 1.60 0.82 4.13 24 I1_AR15 ActiveIntronRegion 0 1.90 0.00 0.00 0.14 1.39 0.00 1.72 1.39 1.32 0.00 0.00 0.00 15.77 0.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.91 1.08 25 ER2a ExonRegion 0 5.02 0.95 3.56 1.66 2.97 2.74 1.37 4.63 11.43 0.54 0.00 0.00 27.60 40.11 9.06 14.24 0.00 5.01 2.15 6.33 41.34 37.51 62.62 26 E2a_E3a KnownJunction 0 3.63 3.35 7.86 4.66 0.00 7.84 2.25 11.42 24.33 3.01 0.00 0.00 39.77 45.79 17.92 15.98 0.00 5.84 4.61 5.82 69.13 64.48 64.19 27 ER3a ExonRegion 0 1.85 0.51 8.99 3.71 2.03 4.22 1.45 3.89 13.12 4.35 0.00 0.00 36.01 45.92 6.71 15.05 0.00 4.66 2.29 4.08 64.25 43.58 68.09 28 E3a_E4a KnownJunction 0 0.00 0.00 3.84 3.96 7.72 8.69 6.54 4.48 11.05 2.63 0.00 0.00 39.77 44.03 17.18 19.40 0.00 2.45 0.00 7.86 71.35 43.23 74.61 29 ER4a ExonRegion 0 5.79 1.17 5.97 2.67 1.38 4.73 2.27 3.52 11.04 2.72 0.00 0.00 36.74 42.88 7.29 16.40 0.95 2.46 1.38 3.88 55.19 61.59 69.45 30 E4a_E5a KnownJunction 0 0.00 0.00 5.09 0.00 0.00 2.21 4.50 6.65 13.43 1.67 0.00 0.00 18.99 38.44 8.90 12.65 0.00 1.58 0.00 3.26 79.14 52.42 48.83 31 ER5a ExonRegion 0 3.48 0.00 6.77 0.00 1.31 1.87 2.23 4.45 10.18 2.90 0.00 0.00 36.89 33.79 10.13 8.40 0.00 0.12 2.57 2.58 39.05 30.89 58.51 32 E5_Da NovelBoundary 0 3.11 0.00 0.00 0.00 0.00 0.00 0.00 4.11 0.00 0.00 0.00 0.00 24.67 9.77 0.00 0.00 0.00 0.00 0.00 5.18 14.64 6.00 8.45 33 E5a_E6a KnownJunction 0 3.11 0.00 1.27 0.00 0.00 2.78 0.00 0.00 7.12 2.47 0.00 0.00 21.43 17.01 14.09 15.55 0.00 0.00 12.05 2.75 31.44 34.05 64.45 34 I5 Intron 0 3.58 0.05 0.87 0.40 2.18 0.53 1.94 1.93 4.27 0.33 0.00 0.02 18.51 8.70 1.69 5.20 0.12 0.37 0.30 1.89 8.07 11.15 16.89 35 I5_SR1 SilentIntronRegion 0 3.58 0.05 0.87 0.40 2.18 0.54 1.94 1.93 4.27 0.33 0.00 0.02 18.52 8.70 1.69 5.20 0.12 0.37 0.30 1.89 8.07 11.15 16.89 36 ER6a ExonRegion 0 9.83 0.00 5.17 2.42 5.55 6.10 0.86 8.00 14.58 3.93 0.00 0.00 64.70 41.98 14.08 22.63 0.00 3.36 3.19 2.45 46.95 48.68 100.74 37 E6a_E7a KnownJunction 0 3.33 0.00 1.83 0.00 8.40 2.90 1.77 10.10 14.41 6.53 0.00 0.00 47.72 46.21 19.53 24.52 0.00 2.07 0.00 10.67 39.97 45.25 80.67 38 ER7a ExonRegion 0 7.70 0.82 4.34 2.55 1.84 1.38 2.01 10.09 15.96 3.17 0.00 0.00 54.47 39.35 11.17 20.37 1.33 2.66 1.98 5.09 47.27 53.26 78.88 39 E7a_E8a KnownJunction 0 0.00 0.00 7.54 1.43 4.33 5.00 4.20 6.16 19.42 3.06 0.00 0.00 35.06 67.04 8.90 12.99 0.00 7.05 9.60 2.68 49.05 76.48 82.55 40 ER8a ExonRegion 0 5.85 0.32 5.41 2.46 3.87 2.11 2.28 7.49 13.40 1.84 0.00 0.00 54.98 34.73 12.23 20.24 0.00 3.93 1.98 3.12 39.48 41.18 66.70 41 E8a_E9a KnownJunction 0 3.70 0.00 5.14 3.83 7.56 2.56 4.06 6.57 15.22 1.45 0.00 0.00 39.77 36.44 22.25 11.62 0.00 1.82 0.00 0.00 37.75 40.41 46.86 42 ER9a ExonRegion 0 4.81 0.62 2.43 2.83 3.97 3.67 1.92 8.73 9.87 1.43 0.00 0.00 44.36 31.80 14.78 21.15 0.00 2.19 3.17 1.31 44.50 45.02 62.43 43 E9a_E10a KnownJunction 0 6.30 0.00 1.83 4.10 4.24 8.40 4.50 3.37 7.61 2.82 0.00 0.00 55.19 36.32 29.30 20.68 0.00 0.00 4.80 0.00 21.99 28.17 54.80 44 ER10a ExonRegion 0 5.41 0.00 4.34 3.27 3.85 5.46 4.69 4.42 3.96 1.88 0.00 0.00 20.48 34.87 13.41 18.84 0.00 0.83 1.47 3.19 42.67 33.77 61.95 45 E10_Da KnownBoundary 0 6.82 0.00 4.88 7.03 7.47 6.93 4.37 6.82 4.14 3.98 0.00 0.00 27.27 26.43 0.00 19.48 0.00 0.00 0.00 6.52 58.32 35.03 82.46 46 ER10b ExonRegion 0 37.19 2.70 9.27 6.43 17.62 9.50 7.47 10.01 16.00 3.78 0.00 0.12 44.22 39.26 9.88 22.69 0.11 1.12 3.02 4.18 36.48 76.94 80.35