Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 WASH2P Gene 0 11.55 5.52 34.16 33.92 8.63 13.73 4.64 33.34 27.24 32.67 14.08 1.60 2.34 11.56 14.15 8.75 11.06 19.07 7.60 10.15 13.37 8.41 8.95 2 326632 Transcript 0 14.23 4.97 24.94 30.69 12.22 25.14 6.14 28.77 24.50 22.00 12.32 1.33 1.98 8.99 12.08 9.94 7.80 15.60 7.64 7.26 12.05 8.31 14.33 3 453662 Transcript 0 3.88 1.54 12.61 9.78 2.28 2.92 1.44 14.55 8.97 10.56 7.32 0.48 0.79 4.72 6.32 4.36 6.00 7.00 4.42 4.21 6.10 5.01 3.22 4 ER1a ExonRegion 0 14.56 4.92 5.02 7.63 5.03 35.32 7.04 2.45 5.01 4.54 5.99 0.00 0.00 5.94 13.29 1.55 5.35 3.77 4.91 2.30 11.28 5.46 9.81 5 E1_Da NovelBoundary 0 0.00 0.00 0.00 3.50 4.07 0.00 3.36 0.00 0.00 2.66 2.00 0.00 0.00 0.00 14.83 0.00 0.00 2.20 0.00 3.26 3.09 0.00 0.00 6 E1a_E2a KnownJunction 0 80.53 16.05 15.52 33.50 32.60 153.55 36.26 17.13 19.04 20.87 20.48 0.00 0.00 16.89 43.39 28.54 27.40 20.02 46.50 11.70 45.72 35.15 69.91 7 E1a_E5b NovelJunction 0 0.00 0.00 0.00 0.00 12.99 19.70 0.00 0.00 0.00 0.00 2.47 0.00 0.00 2.30 0.00 0.00 0.00 2.20 0.00 0.00 0.00 0.00 0.00 8 I1_AR2 ActiveIntronRegion 0 29.72 14.50 26.83 28.99 24.56 28.64 42.52 34.83 29.88 53.39 22.85 49.21 19.10 38.87 37.47 19.61 28.19 24.58 21.25 38.65 33.10 19.07 16.66 9 I1_SR3 SilentIntronRegion 0 7.95 5.01 8.85 15.92 6.13 10.11 9.11 11.76 13.71 22.07 8.92 11.04 6.39 12.03 10.35 5.13 7.21 13.80 8.15 10.92 21.96 9.52 9.47 10 E2_Ab NovelBoundary 0 3.33 3.35 13.45 13.35 4.24 2.90 4.42 9.49 4.89 23.07 7.74 0.00 0.00 2.47 0.00 8.37 8.79 22.84 0.00 6.52 2.90 6.25 20.83 11 ER2a ExonRegion 0 35.98 12.20 14.50 22.71 13.38 86.19 17.21 9.79 14.00 15.29 11.60 0.00 0.00 16.24 27.08 2.97 13.20 9.24 9.56 6.38 30.85 12.50 20.56 12 ER2b ExonRegion 0 22.47 4.15 18.73 22.74 6.06 18.70 6.05 23.77 25.75 30.18 11.17 2.46 1.33 7.91 7.12 4.18 14.47 23.17 7.30 13.04 24.88 6.26 6.61 13 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E2_Db NovelBoundary 0 7.04 2.57 17.21 20.88 0.00 4.94 4.24 25.01 49.85 72.02 72.54 0.00 0.00 20.78 5.07 44.18 108.09 110.35 51.11 29.40 36.70 64.97 54.29 15 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 2.13 2.20 0.00 0.00 17 I2 Intron 0 7.85 4.64 12.70 16.85 6.68 9.95 6.07 12.75 17.74 26.75 9.09 3.39 4.15 11.20 9.35 7.25 8.48 23.55 7.54 11.63 17.04 7.73 10.64 18 I2_SR1 SilentIntronRegion 0 3.02 2.51 11.01 12.20 3.95 8.55 5.70 9.13 18.43 27.70 7.97 1.20 1.50 11.47 7.92 6.24 9.48 30.06 8.16 15.58 14.77 9.55 13.42 19 I2_SR2 SilentIntronRegion 0 9.76 3.63 16.04 22.27 9.92 13.24 6.79 17.02 22.04 33.80 12.05 6.25 8.06 13.82 12.20 10.72 13.80 32.93 7.89 14.25 26.53 10.47 13.00 20 I2_AR3 ActiveIntronRegion 0 13.16 5.53 23.17 11.63 16.81 18.74 12.91 14.31 23.97 38.53 4.83 2.03 2.93 4.36 11.06 14.21 0.10 24.42 6.97 8.71 5.85 8.20 15.69 21 I2_AR4 ActiveIntronRegion 0 14.44 15.25 26.47 39.80 13.62 18.45 13.75 24.97 31.23 52.03 21.45 4.18 4.46 24.47 18.29 12.71 9.27 38.24 15.58 23.22 32.80 13.76 18.35 22 I2_SR3 SilentIntronRegion 0 9.21 5.57 10.45 10.61 5.66 6.84 5.43 12.50 16.94 16.58 5.29 3.93 4.05 6.61 8.75 4.07 5.75 10.05 5.94 7.68 7.95 3.11 5.84 23 E3_Aa NovelBoundary 0 59.42 41.70 250.85 287.54 35.99 47.08 33.03 340.79 202.98 308.13 70.07 13.95 45.78 256.58 145.74 170.90 60.87 579.31 179.39 104.06 41.82 108.44 105.51 24 ER3a ExonRegion 0 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 2.98 0.02 0.00 0.00 0.00 0.00 0.00 0.13 1.67 0.00 0.00 25 E3_Da NovelBoundary 0 150.40 43.94 293.69 163.15 164.43 76.32 135.14 407.08 232.14 601.17 248.38 130.09 116.06 221.62 138.45 293.77 206.08 539.23 352.95 236.94 159.82 129.63 223.65 26 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER4a ExonRegion 0 1.58 1.05 18.05 19.45 4.00 4.72 0.78 30.03 20.91 25.66 10.95 0.00 0.00 5.79 8.62 3.51 8.27 14.48 2.41 5.54 19.28 7.37 9.64 28 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E5_Aa NovelBoundary 0 33.41 5.66 58.63 71.75 25.89 31.29 17.89 63.17 30.87 83.43 24.53 17.56 13.31 16.66 0.00 8.03 24.78 61.19 30.21 23.27 42.38 32.27 29.45 30 ER5a ExonRegion 0 0.00 0.00 5.51 3.07 4.01 5.50 0.33 5.19 5.25 5.73 1.45 0.00 0.00 3.25 0.73 1.49 2.48 5.54 0.00 2.66 1.10 1.04 0.00 31 ER5b ExonRegion 0 3.38 3.77 15.05 24.00 4.56 18.84 5.48 22.30 24.74 23.73 8.05 0.00 1.35 6.20 4.75 8.26 5.29 23.48 7.11 9.90 10.73 8.18 5.13 32 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 E5a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER6a ExonRegion 0 4.76 1.02 3.98 6.81 0.67 2.29 0.00 5.19 9.26 7.17 2.42 0.00 0.00 0.41 0.00 0.00 1.65 3.23 1.59 2.13 2.75 0.52 0.00 35 ER6b ExonRegion 0 15.59 1.32 22.16 27.37 15.44 14.24 5.78 24.47 31.50 32.30 10.97 3.82 9.17 5.60 9.22 9.59 6.82 21.18 5.95 6.73 8.30 6.40 8.05 36 E6_Da NovelBoundary 0 13.71 0.00 5.26 5.26 3.90 10.90 2.21 6.94 6.77 1.67 0.00 0.00 0.00 2.59 0.00 0.00 0.00 8.75 0.00 0.00 3.09 6.12 0.00 37 E6a_E7a KnownJunction 0 14.82 9.67 51.18 99.99 63.24 33.50 10.20 50.44 70.86 60.73 32.27 12.60 6.82 25.08 19.28 35.80 13.09 57.58 18.35 24.67 16.00 25.72 40.04 38 E6b_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER6c ExonRegion 0 2.12 0.00 0.00 1.36 3.34 1.38 2.32 0.00 0.00 1.72 1.45 2.16 2.35 0.00 7.25 2.97 3.30 0.00 0.80 1.60 2.20 0.00 0.00 40 E7_Ab NovelBoundary 0 9.41 0.00 10.88 18.41 11.88 2.27 9.14 1.64 6.08 16.90 4.58 5.85 6.33 4.65 22.50 14.61 7.39 7.17 3.58 5.31 10.07 2.33 3.24 41 ER7a ExonRegion 0 20.11 6.10 42.28 69.51 30.77 29.34 11.92 43.21 59.90 43.58 28.99 8.66 9.38 19.49 17.41 31.21 13.20 46.19 20.70 19.15 13.22 18.75 29.37 42 ER7b ExonRegion 0 9.67 3.55 21.92 34.61 9.35 10.32 3.30 30.85 28.95 24.63 10.11 2.62 2.21 4.96 6.84 11.09 5.52 17.76 4.02 7.22 3.49 4.37 8.42 43 E7a_E8b KnownJunction 0 3.33 5.00 60.44 61.63 29.63 41.51 3.71 68.22 49.48 39.35 31.53 0.00 15.10 26.49 30.41 42.13 8.32 29.93 0.00 17.64 0.00 14.14 34.32 44 E7_Db NovelBoundary 0 17.41 17.83 31.70 21.28 20.88 41.62 6.18 46.54 22.71 29.95 61.17 6.15 13.64 14.54 12.36 24.01 25.34 70.30 29.55 8.56 36.63 41.03 40.29 45 E7b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER7c ExonRegion 0 0.00 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.41 0.00 1.93 0.00 1.56 1.08 0.00 0.00 2.20 1.85 0.00 0.00 0.00 0.00 0.00 47 E8_Aa NovelBoundary 0 8.45 0.00 6.71 1.23 3.31 2.10 0.00 4.64 2.17 2.04 14.74 5.85 0.00 6.77 8.90 3.16 3.65 10.90 3.67 2.36 7.04 2.39 10.93 48 ER8a ExonRegion 0 1.06 1.02 10.11 13.29 6.02 8.71 0.33 15.56 12.35 9.18 7.73 1.08 7.04 8.53 9.43 8.92 15.68 7.39 0.00 5.85 0.00 2.08 4.40 49 ER8b ExonRegion 0 3.29 1.28 18.87 22.63 6.64 8.35 2.56 23.61 17.71 18.20 11.79 2.50 4.97 9.28 8.69 6.68 8.24 15.14 1.62 5.38 1.25 3.02 5.70 50 E8_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 E8a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER8c ExonRegion 0 0.00 2.03 4.06 0.00 0.00 2.23 1.45 0.00 0.00 2.40 1.39 0.00 0.00 4.47 9.16 0.00 1.44 0.00 0.00 0.66 2.69 0.00 0.09 53 E8_Db NovelBoundary 0 39.19 9.21 13.25 5.53 3.57 22.66 6.27 18.48 1.50 27.40 9.53 6.30 6.82 11.18 4.45 3.67 4.77 11.81 12.52 2.81 12.05 19.59 3.84 54 E8b_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 E9_Aa NovelBoundary 0 6.22 0.00 11.41 0.00 0.00 8.01 4.02 15.61 1.59 6.42 4.37 0.00 0.00 2.18 0.00 0.00 4.30 4.68 0.00 0.00 5.62 3.12 0.00 56 ER9a ExonRegion 0 0.00 0.00 0.00 0.55 0.00 0.00 0.00 0.00 0.99 0.00 1.93 0.00 0.00 4.55 2.90 0.00 0.00 0.74 0.00 1.70 0.00 0.00 2.94 57 ER9b ExonRegion 0 6.95 3.45 36.26 23.24 10.36 5.11 2.73 42.06 23.62 26.73 24.66 0.33 0.92 6.90 3.91 3.12 12.41 11.09 4.84 9.92 13.58 8.64 4.00 58 E9_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 E9a_E10b KnownJunction 0 15.11 0.00 60.73 70.39 4.33 2.90 6.76 111.11 62.90 43.11 10.74 0.00 0.00 0.00 0.00 0.00 0.00 39.34 0.00 3.26 3.15 0.00 0.00 60 ER9c ExonRegion 0 3.56 1.39 0.33 3.32 19.45 1.16 0.87 3.84 0.00 0.62 5.42 0.00 1.94 1.31 0.00 1.01 0.00 1.58 1.79 0.00 0.00 13.72 1.86 61 E9_Db NovelBoundary 0 231.74 62.16 40.42 33.40 103.31 18.85 8.35 40.29 20.43 61.62 48.96 0.00 13.96 57.80 16.69 133.04 49.37 46.43 59.30 35.79 34.97 57.31 99.36 62 E9b_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 E10_Aa NovelBoundary 0 50.01 0.00 71.20 40.62 11.97 24.64 12.28 39.06 20.57 69.79 18.06 0.00 6.33 16.66 20.03 19.57 29.45 60.02 8.85 15.15 16.68 22.04 7.43 64 ER10a ExonRegion 0 15.87 11.18 69.23 43.61 8.03 15.59 7.28 80.37 39.52 41.86 28.99 2.16 2.35 4.06 4.35 11.89 16.50 18.48 1.59 11.70 24.24 11.46 8.81 65 ER10b ExonRegion 0 36.08 22.87 107.74 70.78 18.96 26.64 14.39 118.07 65.71 82.15 52.80 6.85 4.53 32.98 41.58 22.08 34.12 29.06 16.33 23.80 45.62 20.30 22.50 66 E10_Da NovelBoundary 0 45.93 23.75 72.94 35.16 67.49 64.62 28.04 27.77 37.62 30.03 28.38 0.00 0.00 12.01 11.74 11.71 3.83 60.56 19.95 29.98 26.01 34.78 19.72 67 E10a_E11a KnownJunction 0 45.86 8.88 122.02 86.54 6.88 26.58 14.75 147.91 92.53 116.61 89.34 5.70 0.00 45.38 66.63 56.05 74.05 91.57 58.73 55.03 66.35 64.97 32.95 68 E10b_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69 ER10c ExonRegion 0 25.40 14.24 93.13 58.60 5.35 1.83 1.32 101.98 60.52 59.64 36.73 0.00 0.00 17.87 20.31 5.94 26.41 7.39 9.56 14.89 44.07 8.33 8.81 70 E11_Aa NovelBoundary 0 21.56 8.55 30.40 28.27 4.07 17.77 2.21 8.09 11.49 26.94 0.00 0.00 0.00 2.18 5.19 0.00 4.77 8.00 8.66 4.92 12.17 2.45 18.18 71 E11_Ab NovelBoundary 0 14.30 3.09 6.98 9.62 0.00 19.36 2.08 7.19 3.39 3.09 2.47 0.00 0.00 0.00 0.00 0.00 8.70 7.17 0.00 15.34 3.03 3.00 3.93 72 ER11a ExonRegion 0 14.82 7.12 49.01 36.12 2.68 0.92 0.66 68.27 34.58 41.29 20.30 0.00 0.00 10.56 13.06 1.49 19.81 3.70 11.15 7.45 27.55 8.33 5.87 73 ER11b ExonRegion 0 6.66 3.68 83.40 64.70 1.97 3.75 0.72 100.58 50.88 70.80 22.77 2.67 0.00 36.88 32.43 24.30 24.17 19.56 11.52 18.05 23.59 19.30 19.82 74 E11a_E12b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 E11_Db NovelBoundary 0 25.78 21.05 84.12 93.59 26.40 35.09 31.44 39.51 65.05 84.75 43.27 0.00 0.00 6.59 22.00 32.38 7.76 106.87 3.86 42.89 11.24 22.35 3.24 76 E11b_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77 ER11c ExonRegion 0 0.00 0.00 0.61 3.41 0.00 0.00 0.00 0.00 1.24 0.57 0.00 0.00 0.00 1.62 0.00 1.49 0.00 0.00 0.00 1.06 0.00 0.00 0.00 78 E12_Aa NovelBoundary 0 168.10 41.37 377.66 326.63 193.21 131.63 81.92 236.75 152.57 233.11 138.40 41.41 24.67 83.70 51.42 115.44 82.37 357.08 69.27 107.89 86.49 90.81 79.56 79 ER12a ExonRegion 0 1.28 0.72 25.08 26.78 1.42 2.80 5.02 8.41 10.14 15.65 4.04 0.00 0.00 23.22 31.74 14.90 0.97 26.90 22.81 4.69 9.46 13.11 17.10 80 E12_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 81 ER12b ExonRegion 0 9.93 4.54 67.57 65.30 17.12 32.33 8.93 26.10 37.81 54.78 14.44 1.40 3.61 22.69 36.31 15.07 19.15 34.64 13.23 21.67 17.68 19.02 16.99 82 E12_Da KnownBoundary 0 37.49 8.49 65.28 36.69 74.45 66.44 17.36 32.16 58.36 40.43 37.22 0.00 6.82 31.43 51.92 11.79 28.42 30.80 22.02 14.57 15.57 13.66 37.82 83 ER12c ExonRegion 0 16.22 10.29 38.13 47.68 7.20 13.37 3.10 25.89 29.36 39.16 7.90 0.00 0.36 10.05 13.57 7.43 9.50 21.66 10.24 10.70 9.18 5.47 6.90