Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TGFBRAP1 Gene 0 18.75 36.67 32.26 31.95 21.42 42.15 28.00 27.54 31.07 50.72 125.67 61.92 77.71 141.28 73.77 102.93 111.33 71.91 37.53 46.80 35.33 44.92 37.08 2 393359 Transcript 0 6.81 12.50 11.76 8.75 6.63 12.95 8.18 7.66 8.39 13.24 23.81 11.42 13.37 30.45 21.80 25.40 31.40 15.39 8.77 11.92 9.00 9.87 9.15 3 258449 Transcript 0 0.00 0.00 0.61 0.00 0.00 0.46 0.00 0.43 0.31 1.43 3.87 2.16 0.00 1.62 1.45 1.49 6.60 2.31 0.80 2.66 1.65 0.00 0.73 4 ER1a ExonRegion 0 0.26 0.51 0.27 0.00 1.00 1.98 0.66 0.51 0.37 0.91 5.57 0.44 0.00 2.46 0.57 7.73 8.88 3.27 2.35 1.85 5.55 0.52 5.82 5 E1a_E2b KnownJunction 0 0.00 0.00 3.61 0.00 0.00 2.44 0.00 2.42 3.33 7.76 4.42 0.00 0.00 11.12 4.57 4.53 21.79 6.72 0.00 5.43 3.15 0.00 0.00 6 ER2a ExonRegion 0 0.00 0.00 0.61 0.00 0.00 0.46 0.00 0.43 0.31 1.43 3.87 2.16 0.00 1.62 1.45 1.49 6.60 2.31 0.80 2.66 1.65 0.00 0.73 7 ER2b ExonRegion 1 3.31 10.59 14.78 18.86 7.62 16.86 12.25 16.84 21.25 40.48 115.16 29.91 29.50 140.61 50.13 86.44 110.74 73.20 33.88 51.06 48.94 36.12 35.29 8 E2a_E3a KnownJunction 1 12.22 12.43 17.12 30.03 15.62 29.41 22.04 14.33 23.35 50.61 91.02 18.01 39.28 149.39 33.25 125.52 104.82 108.61 46.02 40.40 39.54 62.09 44.47 9 ER3a ExonRegion 0 13.02 29.71 21.97 30.23 18.35 42.59 26.59 19.98 40.91 56.46 142.00 50.62 62.73 203.01 65.79 113.31 167.62 85.85 53.01 61.58 39.34 46.83 45.10 10 E3a_E4a KnownJunction 0 17.63 54.33 20.46 35.59 46.86 46.28 33.56 22.47 45.92 73.04 170.46 72.47 55.03 218.26 58.35 143.81 227.96 86.06 54.87 71.46 35.52 53.70 74.01 11 I3_AR1 ActiveIntronRegion 0 13.09 5.63 7.42 4.72 5.95 0.00 3.63 4.54 0.74 1.98 0.00 0.00 3.45 0.28 2.69 1.53 4.18 1.95 0.51 1.14 0.59 0.56 0.00 12 E4_Aa NovelBoundary 0 7.19 25.26 18.60 3.20 12.65 5.68 13.20 10.47 3.01 11.39 0.00 0.00 14.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.33 13 ER4a ExonRegion 0 37.63 56.24 44.10 33.56 34.47 66.56 50.75 40.04 48.02 98.36 243.98 118.66 152.90 261.51 89.17 193.80 224.01 126.39 76.70 65.93 46.59 93.52 92.97 14 E4_Da NovelBoundary 0 39.41 16.12 8.52 7.09 3.57 0.00 5.83 11.62 0.00 5.51 0.00 0.00 0.00 0.00 0.00 7.60 14.31 2.53 4.80 2.43 0.00 0.00 0.00 15 E4a_E5a KnownJunction 0 7.41 47.95 28.59 38.42 55.60 92.62 43.99 49.66 49.94 112.01 327.08 144.65 105.19 228.03 93.70 162.18 259.28 100.32 81.32 56.57 48.50 91.67 83.31 16 ER5a ExonRegion 0 4.95 31.61 29.36 27.54 23.15 63.74 32.83 37.03 39.43 91.55 239.07 173.34 123.52 232.07 65.79 153.48 213.44 144.35 71.54 65.57 57.22 85.22 79.89 17 E5_Da NovelBoundary 0 0.00 0.00 7.13 1.30 7.05 2.67 8.52 4.60 7.55 12.06 7.84 18.16 0.00 17.36 4.45 4.36 8.23 11.11 14.40 26.97 3.15 0.00 0.00 18 E5a_E6a KnownJunction 1 17.19 46.64 36.19 18.98 15.20 53.04 41.20 23.41 46.06 71.99 184.31 141.35 191.22 273.59 50.19 206.36 160.45 140.11 90.07 46.15 56.59 119.77 93.05 19 I5 Intron 0 3.90 4.79 3.90 6.30 5.96 7.53 12.68 5.83 6.48 7.42 14.78 10.23 10.78 16.75 5.78 13.67 16.99 14.60 5.75 13.51 3.70 3.80 4.88 20 I5_SR1 SilentIntronRegion 0 3.90 4.79 3.90 6.30 5.96 7.53 12.69 5.83 6.49 7.43 14.79 10.24 10.79 16.76 5.79 13.68 17.00 14.61 5.76 13.52 3.70 3.80 4.88 21 E6_Aa NovelBoundary 0 19.93 14.87 17.65 15.18 15.53 10.11 14.79 13.88 13.57 20.31 18.79 13.95 6.17 27.72 14.09 18.80 25.43 59.82 11.39 7.99 8.90 2.88 3.50 22 ER6a ExonRegion 0 24.74 41.59 32.36 31.44 26.88 64.31 37.44 33.58 51.69 74.51 234.66 109.43 142.63 257.51 107.58 177.94 194.73 133.06 61.87 84.79 61.57 76.51 65.99 23 E6a_E7a KnownJunction 0 25.04 83.60 18.89 44.72 34.47 80.35 32.59 36.47 78.82 96.22 324.45 111.49 142.20 313.15 165.03 182.86 271.72 129.17 55.44 119.72 65.05 110.96 67.27 24 ER7a ExonRegion 0 14.67 62.66 31.88 56.89 59.10 113.73 60.97 59.84 74.00 92.40 298.03 168.10 176.77 299.82 137.96 251.91 268.57 142.91 78.54 98.61 63.41 107.52 77.92 25 E7a_E8a KnownJunction 1 31.12 62.62 51.65 77.58 67.32 124.87 65.54 74.51 73.61 100.01 228.64 130.54 155.02 386.78 180.85 357.77 166.25 141.85 125.84 99.77 94.52 120.94 102.95 26 ER8a ExonRegion 0 24.40 44.81 46.53 60.70 29.10 56.73 38.57 70.88 65.34 97.83 265.29 169.09 201.12 290.29 117.90 235.89 228.79 130.19 80.23 90.03 83.47 98.11 73.58 27 E8a_E9a KnownJunction 0 17.19 71.83 58.31 84.11 38.29 108.46 67.92 79.64 72.31 109.30 282.18 211.87 193.82 304.02 134.12 244.55 224.68 150.02 123.02 87.44 81.48 106.85 58.99 28 ER9a ExonRegion 0 41.25 83.60 67.01 77.79 52.19 116.09 91.43 72.64 67.19 115.46 317.50 240.36 320.29 347.09 129.43 250.10 276.22 150.30 88.58 94.11 75.83 103.95 85.24 29 E9a_E10a KnownJunction 0 30.01 115.83 56.12 59.10 39.90 152.92 125.91 49.82 43.55 113.33 292.92 173.16 359.72 334.75 160.46 322.14 247.59 144.38 87.16 77.98 74.81 110.77 118.14 30 ER10a ExonRegion 1 13.78 47.27 39.51 26.58 15.29 53.01 35.95 33.13 42.26 82.13 171.59 159.03 232.10 240.97 102.81 149.59 154.67 101.49 47.24 65.80 53.25 72.27 58.64 31 E10a_E11a KnownJunction 0 13.34 32.69 35.21 19.58 3.31 51.73 34.71 44.65 47.60 91.25 208.00 84.93 222.55 241.92 105.82 94.16 159.05 105.50 51.30 51.52 110.03 41.64 22.96 32 I10_AR1 ActiveIntronRegion 0 3.30 7.82 2.12 5.60 6.36 5.60 7.51 8.25 5.02 6.74 14.57 14.28 6.09 14.93 6.39 13.28 17.47 13.61 2.74 8.85 1.90 2.60 4.62 33 I10_SR2 SilentIntronRegion 0 4.05 16.06 6.20 8.12 7.72 5.50 11.69 8.14 8.81 6.87 19.06 18.83 11.07 20.58 6.87 22.62 22.98 13.46 7.11 14.61 2.00 4.88 8.48 34 E11_Aa NovelBoundary 0 3.48 13.09 1.24 4.99 0.00 2.33 6.01 9.45 1.27 7.95 19.16 6.30 0.00 12.60 4.45 3.33 16.92 17.70 4.61 15.02 12.29 5.39 3.24 35 ER11a ExonRegion 0 17.77 41.91 42.86 36.04 18.85 40.88 26.57 35.94 37.95 78.37 156.62 62.11 122.56 180.99 116.45 111.42 127.32 109.72 29.93 66.12 52.44 46.14 38.75 36 E11a_E12a KnownJunction 0 36.30 88.87 60.20 83.24 26.83 95.23 40.28 98.13 61.05 95.36 254.49 74.42 140.09 225.56 125.35 237.29 174.85 158.27 52.05 115.95 41.02 98.03 85.28 37 I11 Intron 0 11.95 16.77 11.70 10.38 7.79 10.11 13.05 6.23 6.19 8.43 16.20 10.71 16.37 13.11 6.08 12.79 16.86 12.81 4.71 9.34 4.94 7.47 5.40 38 I11_AR1 ActiveIntronRegion 0 19.49 21.39 16.73 15.97 11.76 16.73 17.53 8.82 6.34 10.21 14.80 19.08 23.87 13.12 7.87 10.48 16.12 10.58 3.32 9.19 3.73 7.59 3.04 39 E12_Aa NovelBoundary 1 35.71 49.14 36.60 21.78 23.17 16.01 19.92 20.70 8.83 25.79 12.74 20.26 60.22 21.48 14.09 16.83 27.21 15.25 0.00 3.00 9.14 11.82 0.00 40 ER12a ExonRegion 0 38.40 70.33 64.50 84.58 54.59 91.72 55.69 61.42 63.55 102.56 297.08 119.76 137.67 258.30 136.64 205.36 197.44 155.36 77.37 81.69 56.68 86.90 64.36 41 E12_Da KnownBoundary 0 47.93 73.08 34.77 91.13 62.05 97.61 50.12 44.94 53.91 89.18 84.02 50.27 106.81 203.31 97.29 213.19 139.60 75.82 55.81 83.54 34.29 102.02 94.07 42 ER12b ExonRegion 0 20.17 36.99 31.40 26.26 18.90 34.42 23.88 20.06 21.48 31.05 61.43 33.83 40.11 77.75 60.25 63.95 63.53 36.19 23.94 28.47 18.29 29.10 21.62