Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC159540.3 Gene 0 41.94 65.35 45.46 48.99 30.66 57.50 42.09 47.04 73.89 41.52 23.81 9.92 16.87 23.23 7.20 17.15 22.75 99.57 67.24 146.82 35.49 10.95 10.37 2 480208 Transcript 0 29.09 43.81 30.64 32.62 21.49 47.16 27.95 31.70 50.04 27.71 15.83 6.67 11.58 15.84 4.89 11.64 15.25 67.51 46.83 100.46 23.83 7.36 7.12 3 ER1a ExonRegion 0 19.75 66.40 45.35 45.40 44.93 106.00 31.67 49.67 67.98 23.33 18.63 6.65 14.50 14.17 6.90 19.39 18.52 58.22 28.77 109.79 12.98 5.13 5.48 4 E1_Da NovelBoundary 0 45.71 130.77 66.64 91.76 104.84 89.55 93.58 75.95 116.95 73.49 43.54 13.20 33.11 28.19 14.22 11.71 38.80 101.31 27.48 176.03 16.62 10.29 14.60 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 55.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 17.60 86.11 49.30 54.23 39.22 33.80 27.07 60.05 74.70 39.85 7.37 1.59 4.04 3.94 1.74 2.80 2.69 37.20 22.12 72.59 4.34 3.66 2.77 7 Ix_AR1 ActiveIntronRegion 0 14.97 77.21 45.86 41.33 39.22 38.69 28.18 53.07 72.60 33.09 8.71 0.00 3.13 2.66 1.55 1.50 1.67 49.07 24.96 77.82 3.80 4.15 4.46 8 Ix_SR1 SilentIntronRegion 0 14.10 80.08 48.77 65.17 12.31 9.06 19.25 56.56 87.25 40.19 10.40 1.82 6.28 4.77 2.55 0.00 0.00 36.11 9.05 96.43 7.14 3.63 5.70 9 Ix_AR2 ActiveIntronRegion 0 23.43 108.68 67.13 69.93 55.06 40.30 30.96 78.06 93.97 47.62 8.30 3.87 6.24 4.90 1.93 3.90 3.98 46.90 30.49 87.40 4.89 5.57 3.88 10 Ix_AR3 ActiveIntronRegion 0 24.34 107.17 45.34 68.69 39.87 5.50 24.23 45.63 69.29 35.55 5.80 0.00 9.38 3.25 0.00 0.00 7.92 31.41 45.87 78.08 2.20 0.00 0.00 11 Ix_SR2 SilentIntronRegion 0 13.42 99.26 45.69 56.06 38.73 32.26 28.95 51.22 73.87 40.13 4.75 0.00 1.79 3.38 0.73 1.35 6.00 22.52 27.09 61.04 3.10 1.81 0.00 12 E2_Aa NovelBoundary 0 20.30 56.63 18.75 56.34 25.72 37.42 68.05 28.67 31.86 17.84 17.43 0.00 6.82 3.00 0.00 4.27 9.16 38.72 14.12 49.47 3.15 6.12 0.00 13 ER2a ExonRegion 0 6.37 24.50 15.62 20.19 3.66 45.58 17.78 16.32 23.06 16.11 9.91 3.43 3.86 6.05 2.11 5.24 8.42 29.25 8.38 35.72 12.30 3.73 2.30 14 E2_Da NovelBoundary 1 864.23 902.01 1022.58 1036.13 446.43 535.32 367.96 648.68 780.63 417.06 245.85 55.52 58.92 138.38 116.57 117.32 67.23 392.48 229.94 538.82 164.70 100.48 46.18 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E3_Aa NovelBoundary 0 168.33 210.42 179.68 212.66 77.84 84.84 170.07 157.72 346.78 139.44 62.65 30.61 64.61 78.46 21.76 38.54 50.21 222.11 248.76 482.77 131.71 43.97 20.40 17 ER3a ExonRegion 0 119.32 128.14 92.22 97.53 58.83 28.52 90.30 92.49 159.14 99.10 50.63 23.25 39.54 58.98 15.46 33.58 49.30 250.09 197.02 356.80 93.85 27.95 27.80 18 IG9 Intergenic 0 8.71 14.42 28.82 22.30 6.73 4.19 10.29 13.55 31.57 19.93 7.51 6.23 10.83 3.06 4.68 1.36 0.75 18.50 13.84 31.65 1.51 0.95 4.03 19 IG9_SR1 SilentIntergenicRegion 0 8.71 14.42 28.82 22.30 6.73 4.19 10.29 13.55 31.57 19.93 7.51 6.23 10.83 3.06 4.68 1.36 0.75 18.50 13.84 31.65 1.51 0.95 4.03