Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MRPL30 Gene 0 106.53 220.72 164.48 118.15 96.37 176.94 160.63 70.39 60.36 108.61 141.60 127.91 103.95 142.94 123.89 126.28 135.24 94.97 188.14 99.97 70.22 66.17 67.61 2 410042 Transcript 0 0.24 0.21 0.01 0.00 1.61 0.79 0.18 0.03 0.00 0.00 0.20 0.00 0.39 0.27 0.41 1.47 0.31 0.05 0.57 0.43 2.17 0.00 0.89 3 338148 Transcript 0 1.03 1.70 0.79 0.48 3.47 19.78 5.47 2.34 1.47 0.74 1.31 0.00 0.00 0.00 1.02 1.69 1.16 2.30 10.42 1.15 1.19 1.91 2.30 4 308656 Transcript 0 3.56 29.21 51.80 31.76 11.54 11.13 40.94 8.21 1.22 17.92 17.95 0.00 19.48 7.06 24.60 7.60 12.34 4.44 4.80 13.55 2.29 0.00 7.09 5 473743 Transcript 0 2.50 3.06 5.65 5.25 0.04 3.62 2.79 0.97 4.41 1.70 2.95 0.56 0.00 4.62 2.71 7.88 2.81 1.23 4.39 2.14 3.03 4.48 5.59 6 449429 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 409145 Transcript 0 1.12 2.35 1.19 0.71 2.84 2.92 5.93 1.16 0.62 1.42 0.51 2.71 2.05 0.00 0.89 3.16 0.50 0.00 0.00 4.52 1.17 1.88 0.78 8 465432 Transcript 0 1.74 3.03 0.00 3.73 0.00 5.99 0.00 4.23 0.00 0.83 1.34 0.00 0.00 0.00 0.00 0.00 4.77 3.32 0.00 0.00 0.00 1.26 10.54 9 308644 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 409841 Transcript 0 107.41 343.67 46.09 38.47 117.06 211.35 229.05 22.04 25.01 41.29 156.08 4.33 9.38 108.41 83.41 185.76 187.33 56.82 193.51 88.30 69.97 34.38 83.69 11 476721 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.34 0.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.04 0.00 0.00 1.71 0.00 0.00 0.00 0.00 13 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1a_E5b NovelJunction 0 10.59 6.58 0.00 0.00 0.00 12.61 15.02 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.39 4.52 0.00 0.00 3.09 11.57 4.01 15 ER2a ExonRegion 0 0.94 0.82 0.05 0.00 6.46 2.82 0.61 0.14 0.00 0.00 0.78 0.00 1.56 1.08 1.66 3.84 1.26 0.19 0.56 1.72 3.17 0.00 3.57 16 E2a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.50 0.00 0.00 17 Ix Intron 0 16.41 10.35 10.40 15.01 19.12 11.55 14.76 4.99 4.91 9.32 5.39 16.14 32.99 13.05 10.90 7.92 4.80 2.68 5.02 5.41 6.67 7.07 9.25 18 Ix_SR1 SilentIntronRegion 0 16.49 10.40 10.45 15.08 19.22 11.61 14.83 5.02 4.93 9.36 5.41 16.21 33.14 13.12 10.95 7.96 4.82 2.69 5.04 5.44 6.71 7.10 9.29 19 Ix Intron 0 31.97 38.30 13.97 20.32 24.67 10.43 10.65 8.08 12.64 11.73 2.27 15.44 12.28 10.03 11.18 9.91 4.53 0.90 3.12 5.01 1.72 8.58 5.76 20 Ix_AR1 ActiveIntronRegion 0 32.08 38.45 14.02 20.40 24.76 10.47 10.69 8.12 12.68 11.78 2.28 15.50 12.33 10.06 11.22 9.95 4.55 0.91 3.14 5.03 1.73 8.62 5.78 21 Ix_AR2 ActiveIntronRegion 0 22.11 3.60 6.28 3.69 17.40 8.97 7.50 11.47 3.99 5.55 4.09 6.52 6.64 2.68 6.21 2.48 2.75 0.46 1.06 1.42 0.00 2.61 2.45 22 Ix Intron 0 33.86 6.12 8.25 16.44 30.21 11.74 22.68 13.57 4.16 6.75 12.00 19.70 36.29 20.50 17.34 10.63 9.32 1.39 1.80 8.01 0.41 18.04 2.21 23 Ix_SR1 SilentIntronRegion 0 36.11 7.69 7.29 15.47 31.33 10.90 26.20 12.20 1.44 4.22 9.23 16.56 27.89 16.67 16.98 8.33 8.12 1.27 2.20 6.20 0.00 15.88 2.02 24 Ix_AR1 ActiveIntronRegion 0 32.69 7.46 4.90 23.93 18.73 10.19 18.54 11.52 6.18 10.32 14.60 8.66 46.38 22.92 19.02 14.86 12.47 0.00 3.19 5.91 0.00 22.22 1.96 25 Ix_AR2 ActiveIntronRegion 0 32.01 3.91 10.30 17.11 30.87 13.53 19.01 16.13 7.74 10.01 15.94 26.02 47.48 25.91 18.12 13.54 10.84 1.78 1.20 11.06 1.06 21.13 2.63 26 Ix_SR1 SilentIntronRegion 0 22.70 4.60 4.50 5.26 9.72 5.40 8.76 2.64 1.67 3.93 3.33 7.78 18.28 5.25 4.46 3.97 6.51 0.91 3.31 4.85 1.89 3.77 2.49 27 ER3a ExonRegion 0 1.03 1.70 0.79 0.48 3.47 19.78 5.47 2.34 1.47 0.74 1.31 0.00 0.00 0.00 1.02 1.69 1.16 2.30 10.42 1.15 1.19 1.91 2.30 28 E3_Ab KnownBoundary 0 0.00 2.57 0.00 0.00 7.81 53.26 14.88 2.55 1.71 0.00 3.95 0.00 0.00 0.00 5.32 6.92 3.65 0.00 32.00 5.11 3.09 5.27 11.44 29 ER3b ExonRegion 0 10.93 10.17 4.74 4.05 6.94 69.14 20.72 12.01 4.64 5.33 9.19 0.00 0.00 2.55 11.92 9.00 6.60 10.69 29.10 6.04 9.05 6.25 6.83 30 E3_Ac KnownBoundary 0 17.19 10.66 7.33 6.19 0.00 53.21 25.88 17.66 5.27 8.25 7.11 0.00 0.00 4.59 23.98 12.05 8.70 14.05 4.80 3.26 15.57 0.00 4.10 31 ER3c ExonRegion 0 15.38 9.57 10.52 6.57 21.72 36.73 40.58 12.81 11.73 15.79 16.83 0.00 0.00 18.01 21.76 33.83 35.92 20.16 14.99 6.51 29.56 10.23 17.97 32 E3_Ad KnownBoundary 0 21.86 15.26 1.83 3.73 46.10 48.10 71.59 2.55 1.79 4.59 28.38 0.00 0.00 38.67 45.49 47.25 64.24 2.32 18.64 9.65 46.27 15.55 30.30 33 E3_Ae KnownBoundary 1 65.05 219.90 24.90 19.24 100.42 168.94 174.44 5.34 26.65 30.76 105.03 11.40 0.00 129.85 78.25 116.55 100.70 75.57 114.83 50.05 59.24 50.82 83.49 34 ER3d ExonRegion 1 41.15 105.01 21.52 14.56 79.63 105.04 118.47 6.43 18.77 26.65 73.91 1.04 0.00 81.73 59.65 97.01 101.80 46.27 62.69 28.94 59.68 37.59 50.63 35 ER3e ExonRegion 1 347.00 1086.52 147.40 107.20 394.81 691.39 708.63 73.96 80.44 135.00 515.32 10.48 25.05 401.24 317.61 553.60 609.28 199.95 583.93 263.88 228.20 122.05 280.06 36 E3a_E5b KnownJunction 1 663.38 1917.49 262.88 222.52 617.91 1065.35 1311.72 133.61 141.35 231.85 769.35 52.82 87.49 479.90 402.00 940.69 968.40 412.92 1018.66 472.41 329.03 164.90 414.18 37 E3a_E7a NovelJunction 0 3.78 11.05 0.00 4.00 12.65 12.72 18.72 2.55 0.00 0.00 15.16 0.00 0.00 2.47 0.00 0.00 4.68 0.00 4.71 0.00 3.15 5.51 0.00 38 E3a_E8a KnownJunction 0 3.48 6.05 0.00 7.46 0.00 11.98 0.00 8.46 0.00 1.67 2.68 0.00 0.00 0.00 0.00 0.00 9.54 6.63 0.00 0.00 0.00 2.51 21.08 39 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E5_Ac NovelBoundary 0 68.31 186.22 110.35 95.36 60.87 96.99 199.92 56.93 65.05 106.94 66.02 0.00 6.17 28.14 18.17 180.38 106.59 95.55 145.13 84.88 45.72 27.37 62.91 41 ER5a ExonRegion 1 214.83 687.35 88.84 68.83 234.13 422.69 458.09 44.08 50.02 82.58 312.16 8.66 18.76 216.82 166.82 371.52 374.65 113.64 387.02 176.60 139.94 68.76 167.39 42 ER5b ExonRegion 1 412.72 1304.20 177.68 137.20 433.92 786.70 871.17 88.15 99.22 160.57 589.86 17.32 37.52 356.22 281.91 710.83 730.05 227.27 741.13 339.36 262.98 129.18 314.22 43 ER5c ExonRegion 1 79.83 264.31 103.05 81.22 80.12 154.45 195.18 49.47 64.35 99.54 133.67 10.67 12.42 55.70 41.84 175.52 186.34 105.45 192.69 85.53 81.72 31.40 75.03 44 E5a_E6a KnownJunction 0 0.00 2.83 4.52 1.90 0.00 0.00 0.00 0.00 1.42 0.00 4.69 0.00 0.00 2.47 4.45 3.16 0.00 0.00 4.42 0.00 2.59 0.00 3.16 45 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER6a ExonRegion 0 7.51 2.99 3.68 4.89 0.13 8.47 4.40 1.09 3.85 1.93 4.16 1.69 0.00 4.16 3.68 8.08 8.42 3.68 8.76 6.43 6.50 4.69 5.67 47 E6a_E7a KnownJunction 0 0.00 3.35 8.75 8.96 0.00 2.38 3.97 1.81 7.96 3.17 0.00 0.00 0.00 7.24 0.00 12.39 0.00 0.00 0.00 0.00 0.00 8.76 7.94 48 ER7a ExonRegion 1 14.66 15.34 103.48 59.92 2.31 16.91 6.83 40.71 62.88 103.36 341.10 0.27 1.27 147.15 84.64 115.25 433.35 65.81 141.65 141.11 158.04 60.63 57.17 49 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER8a ExonRegion 1 52.97 321.36 45.65 42.18 127.63 348.76 376.38 23.81 17.55 29.60 16.91 0.00 11.93 78.08 74.86 212.42 27.69 81.50 183.60 45.91 3.67 28.77 99.55 51 E8_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 ER8b ExonRegion 0 1.12 2.35 1.19 0.71 2.84 2.92 5.93 1.16 0.62 1.42 0.51 2.71 2.05 0.00 0.89 3.16 0.50 0.00 0.00 4.52 1.17 1.88 0.78 54 ER9a ExonRegion 1 198.95 651.88 18.93 22.63 76.96 164.11 198.53 18.00 4.94 14.67 2.42 70.44 38.79 26.76 19.66 49.21 6.18 35.64 36.96 24.21 0.10 9.13 23.26 55 E9_Da KnownBoundary 0 191.66 238.97 20.46 22.01 60.02 51.90 74.15 14.17 7.03 17.06 2.68 76.98 24.67 13.66 27.07 52.72 4.58 41.49 56.10 37.26 0.00 6.61 26.55 56 E9_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 E9b_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 ER9b ExonRegion 1 183.75 303.74 58.26 69.38 40.38 153.71 150.09 41.64 12.01 36.49 14.41 215.29 67.79 166.99 103.13 134.02 18.61 83.65 159.85 52.80 4.21 60.80 44.58 59 ER9c ExonRegion 0 4.04 6.20 12.31 10.17 14.69 8.91 16.66 11.05 0.52 5.49 6.83 8.96 0.00 5.67 0.47 5.32 5.99 3.22 1.93 8.36 0.00 0.00 0.00 60 E9_Dc KnownBoundary 0 2.89 15.59 7.39 9.76 12.99 18.11 18.64 6.82 3.15 4.41 7.26 0.00 0.00 7.42 4.45 8.29 8.98 4.93 4.80 5.50 0.00 0.00 0.00 61 ER9d ExonRegion 0 6.80 6.59 3.77 4.09 3.04 6.20 16.97 4.06 1.09 2.17 1.96 7.41 3.62 3.15 4.44 2.84 2.85 1.96 1.21 6.22 0.00 0.00 0.00 62 ER10a ExonRegion 0 89.43 182.38 146.22 102.67 42.06 160.36 124.86 66.30 59.00 114.63 139.37 151.13 62.60 179.70 105.44 136.72 141.80 157.83 219.51 76.72 82.79 68.56 61.88 63 E10_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 E10a_E10d KnownJunction 0 3.56 29.21 51.80 31.76 11.54 11.13 40.94 8.21 1.22 17.92 17.95 0.00 19.48 7.06 24.60 7.60 12.34 4.44 4.80 13.55 2.29 0.00 7.09 65 ER10b ExonRegion 1 103.74 340.09 222.01 154.58 198.96 371.19 308.25 90.55 94.90 190.85 296.89 359.35 140.00 355.71 217.38 224.86 297.08 201.05 283.93 173.86 153.01 115.71 110.41 66 E10_Db KnownBoundary 0 286.72 406.44 294.16 237.00 339.56 506.07 506.37 176.74 155.99 244.07 294.13 447.00 238.62 344.87 199.64 333.07 384.29 384.85 291.49 404.98 229.07 148.37 288.36 67 E10b_E10c KnownJunction 0 0.00 0.00 3.34 8.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 ER10c ExonRegion 0 72.27 141.34 122.83 84.55 67.47 130.79 137.53 55.71 62.37 119.74 146.74 110.33 113.22 181.37 146.99 156.22 153.73 155.55 226.91 127.80 110.68 73.06 97.62 69 E10_Dc KnownBoundary 0 1536.05 1742.58 1862.18 2138.39 1167.74 880.74 1632.25 2213.89 1978.74 1830.78 703.92 731.64 835.17 573.73 545.65 1669.05 1315.29 3012.62 1547.62 1673.54 815.03 688.82 1526.38 70 E10c_E10b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 ER10d ExonRegion 0 80.43 222.75 202.89 132.76 94.76 253.94 187.14 98.42 93.03 159.82 248.15 160.13 132.20 237.06 167.35 183.56 224.80 149.62 259.57 152.18 112.85 99.13 105.98 72 E10_Ab KnownBoundary 0 86.61 208.71 208.06 176.70 63.16 188.36 174.22 146.02 153.93 233.75 147.20 61.07 26.62 121.49 70.83 131.16 104.53 318.98 250.83 135.89 81.86 112.49 117.12 73 ER10e ExonRegion 0 99.97 307.11 174.82 115.68 80.21 223.74 172.52 100.19 71.33 154.56 175.62 115.56 133.68 193.16 153.98 153.69 154.98 201.86 258.73 158.25 133.88 100.31 124.74 74 E10_Ac KnownBoundary 0 661.90 788.35 1218.08 1332.83 637.86 558.03 898.09 1053.47 830.32 980.46 273.39 290.34 325.47 222.91 427.47 562.07 477.79 1193.53 566.42 701.30 353.80 251.00 604.71 75 ER10f ExonRegion 0 241.71 437.07 324.35 235.68 198.72 274.67 246.33 133.37 100.96 189.96 201.98 275.94 246.21 228.98 223.81 145.74 159.66 91.65 222.62 155.18 82.43 111.52 70.45 76 E10_Ad KnownBoundary 1 102.46 120.50 354.33 264.14 163.07 162.46 166.01 151.48 91.72 168.32 185.52 216.22 336.83 201.66 124.24 128.51 99.21 78.72 190.03 146.63 39.97 61.78 65.56 77 ER10g ExonRegion 0 203.72 182.42 412.33 316.24 167.73 217.93 222.36 143.87 114.10 194.22 238.20 269.03 200.54 178.47 224.79 200.42 220.03 121.33 433.81 148.05 80.36 116.74 91.70 78 E10_Dd KnownBoundary 0 510.16 202.53 329.47 265.93 141.94 177.23 248.86 79.31 75.81 119.35 167.04 260.63 206.80 131.67 261.33 234.98 196.73 79.51 431.26 132.18 72.46 77.22 81.52 79 E10_De KnownBoundary 1 24.75 45.45 45.00 48.48 25.30 41.23 45.97 32.61 13.98 20.74 23.11 88.38 26.62 72.11 157.49 64.43 17.02 30.10 107.67 53.69 14.27 36.74 36.96 80 ER10h ExonRegion 1 242.69 111.08 257.89 211.25 86.74 150.07 156.50 84.05 82.96 111.20 116.38 204.93 111.00 117.95 224.12 174.86 123.51 86.15 317.08 122.34 54.36 60.68 76.60 81 E10_Df KnownBoundary 1 17.11 24.54 101.06 65.93 20.20 98.30 51.94 33.85 46.61 38.55 38.96 83.58 6.49 56.15 72.19 59.22 61.90 27.98 94.97 72.80 20.88 34.96 46.01 82 ER10i ExonRegion 1 161.91 65.68 182.09 156.73 63.42 137.53 111.87 69.83 73.24 94.62 81.38 161.92 43.62 105.57 200.77 139.39 81.86 76.87 217.88 113.40 38.56 50.42 70.19 83 ER10j ExonRegion 0 29.59 51.11 109.02 70.17 54.15 84.50 70.49 40.06 46.54 57.46 51.31 62.07 57.57 49.22 47.79 44.81 50.80 63.59 109.64 54.41 41.41 30.03 39.76