Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RNF181 Gene 0 261.01 71.33 191.22 104.26 119.02 170.49 107.65 78.17 58.18 69.37 232.23 38.95 51.13 144.53 325.88 243.52 212.09 82.75 77.23 56.66 167.08 142.67 123.26 2 461845 Transcript 1 26.89 16.06 110.60 60.95 34.92 37.26 19.09 50.78 35.07 43.37 64.95 23.48 13.70 86.33 285.07 233.21 70.93 55.44 58.60 36.53 57.96 99.54 140.14 3 441634 Transcript 0 11.48 3.99 27.21 10.15 12.66 9.89 8.32 8.51 8.71 10.16 9.03 3.81 4.25 6.58 11.59 9.40 9.32 4.11 9.02 5.27 4.53 7.92 8.74 4 306368 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 414390 Transcript 0 0.00 0.00 15.79 7.36 3.65 0.00 4.42 0.00 0.00 1.64 0.00 0.00 0.00 4.94 4.45 8.63 0.00 1.74 0.00 0.00 0.00 5.82 4.35 6 443647 Transcript 0 0.00 0.00 23.39 14.58 12.22 0.00 0.00 16.68 19.30 8.38 9.48 12.60 0.00 16.83 72.56 41.53 7.85 29.02 0.00 9.52 2.35 22.78 18.78 7 456023 Transcript 0 3.33 11.15 25.76 11.71 15.19 14.00 10.60 9.40 4.85 14.88 5.80 3.64 4.38 7.57 16.91 9.52 6.32 7.14 8.43 3.25 8.07 12.46 6.19 8 ER1a ExonRegion 0 16.51 3.86 4.29 0.00 5.89 8.25 4.24 2.25 0.00 1.38 3.87 0.00 0.00 1.46 5.80 4.46 7.59 0.92 1.91 0.00 2.64 4.58 4.40 9 ER1b ExonRegion 1 238.56 82.51 48.49 27.45 68.23 152.34 114.81 22.96 8.82 19.66 147.73 0.00 0.34 76.80 157.70 198.28 108.93 36.95 73.26 29.18 105.78 70.39 88.31 10 ER1c ExonRegion 1 424.89 136.00 79.19 48.55 102.68 265.67 208.69 42.56 21.00 26.38 264.08 3.25 15.24 147.59 292.66 311.33 204.66 63.98 120.65 58.78 176.02 135.95 148.67 11 ER1d ExonRegion 1 2240.66 517.46 379.84 237.45 698.76 1234.57 801.02 240.68 138.31 170.12 1037.02 10.36 37.83 475.71 1262.85 1225.83 930.37 396.24 371.49 228.88 662.96 596.74 746.29 12 E1_Ae KnownBoundary 1 998.25 220.22 536.11 335.32 430.73 623.67 439.82 346.46 203.30 245.20 399.00 18.01 7.63 68.16 186.79 445.10 432.91 463.16 185.61 93.13 352.56 203.72 257.46 13 ER1e ExonRegion 1 340.83 90.05 315.49 191.49 143.99 211.75 123.46 200.66 124.44 149.49 173.90 239.07 395.14 33.80 130.83 173.96 157.72 270.18 61.52 45.88 135.25 80.15 98.56 14 E1a_E2a KnownJunction 1 153.95 43.68 116.85 54.44 51.10 75.81 27.78 41.44 37.62 56.01 69.49 594.94 1040.03 32.02 138.95 68.61 35.53 36.98 4.42 23.14 39.48 25.96 23.30 15 ER2a ExonRegion 0 84.90 41.85 376.73 191.03 61.75 50.67 35.39 169.78 117.53 146.53 586.80 120.43 177.29 356.03 843.76 506.55 533.66 132.56 161.48 127.68 481.65 343.78 266.23 16 E2_Da KnownBoundary 0 9.93 12.43 43.64 22.74 14.60 10.68 3.80 17.58 11.75 10.02 4.79 0.00 0.00 7.42 33.38 30.85 8.04 14.72 9.04 14.76 7.97 17.39 26.55 17 E2a_E2b KnownJunction 0 0.00 0.00 15.79 7.36 3.65 0.00 4.42 0.00 0.00 1.64 0.00 0.00 0.00 4.94 4.45 8.63 0.00 1.74 0.00 0.00 0.00 5.82 4.35 18 E2a_E2c KnownJunction 1 10.15 18.75 539.34 318.71 120.97 81.60 47.12 267.27 161.40 154.03 286.49 56.12 60.22 500.56 1901.85 1443.55 311.45 332.08 319.16 196.48 298.57 534.63 762.63 19 E2a_E2d KnownJunction 1 0.00 0.00 23.39 14.58 12.22 0.00 0.00 16.68 19.30 8.38 9.48 12.60 0.00 16.83 72.56 41.53 7.85 29.02 0.00 9.52 2.35 22.78 18.78 20 E2a_E2e KnownJunction 0 0.00 0.00 28.12 12.85 3.74 0.00 2.21 7.93 2.60 13.32 0.00 5.85 0.00 2.24 15.08 3.33 0.00 12.44 8.94 0.00 0.00 11.02 3.24 21 E2a_E2f NovelJunction 1 0.00 3.35 48.82 27.97 0.00 0.00 0.00 18.98 9.37 17.41 13.32 0.00 6.33 14.13 102.73 28.88 0.00 8.66 23.25 8.82 2.59 60.07 49.34 22 ER2b ExonRegion 0 6.49 5.76 30.41 11.32 20.24 22.99 14.61 17.06 8.09 8.73 12.12 0.00 2.95 10.49 19.12 14.82 11.89 6.73 9.60 11.81 6.30 7.96 11.14 23 E2_Ab KnownBoundary 0 9.56 6.18 22.56 13.09 34.13 56.10 35.02 12.65 1.53 12.60 6.95 0.00 14.45 7.42 14.09 11.11 8.32 2.28 14.40 8.56 0.00 16.78 8.45 24 ER2c ExonRegion 0 26.47 27.66 29.98 18.39 16.83 41.70 18.69 14.94 8.50 15.11 19.89 2.61 2.22 10.23 25.39 15.18 18.46 3.85 11.41 8.81 9.98 9.84 12.00 25 E2_Db KnownBoundary 0 22.52 14.54 15.35 9.96 15.87 23.28 2.08 7.48 5.09 7.63 11.74 6.15 0.00 2.41 5.19 8.54 8.23 2.57 4.33 8.63 10.87 7.65 4.01 26 E2b_E2c NovelJunction 0 53.57 18.94 36.55 10.39 19.61 21.29 19.30 10.51 9.66 19.42 19.79 0.00 0.00 2.94 0.00 12.65 17.86 5.10 8.56 15.47 8.77 8.82 16.73 27 E2_Ac KnownBoundary 0 13.34 12.17 12.48 1.96 4.16 18.97 4.20 2.26 3.44 7.58 5.26 0.00 0.00 5.47 4.45 0.00 13.56 0.00 4.42 3.26 0.00 0.00 0.00 28 ER2d ExonRegion 1 59.26 35.59 280.61 162.18 74.92 77.94 37.73 127.04 94.49 105.52 171.06 67.11 32.83 246.05 825.41 670.21 179.90 153.36 151.30 94.68 158.67 278.15 396.45 29 ER2e ExonRegion 1 70.75 39.04 453.14 259.53 194.34 137.01 51.10 197.19 157.42 146.35 359.52 114.05 57.08 370.81 941.75 805.28 335.37 267.18 184.84 155.74 319.16 311.63 500.57 30 E2_Ad KnownBoundary 0 95.79 40.52 394.72 214.29 313.24 166.27 38.73 128.85 144.44 117.76 409.79 109.99 73.70 336.28 680.51 411.43 340.53 216.35 135.16 137.42 342.43 187.93 299.45 31 ER2f ExonRegion 0 51.37 60.18 426.88 239.39 467.21 481.45 269.46 169.44 148.81 144.39 497.36 65.06 67.82 267.50 549.16 445.50 443.57 201.73 130.99 104.69 343.99 223.39 166.48 32 E2_Dc KnownBoundary 0 11.04 11.18 13.45 7.62 14.35 8.40 4.06 10.43 0.00 13.91 11.85 0.00 0.00 2.41 5.19 3.76 26.83 0.00 18.73 0.00 9.33 15.00 8.19 33 E2c_E2f KnownJunction 0 43.86 153.92 551.46 347.24 609.42 916.40 674.54 202.70 152.60 156.23 462.54 118.39 79.54 385.66 892.52 757.75 437.21 161.63 185.32 114.41 377.52 536.65 264.20 34 E2_Ae KnownBoundary 0 14.60 6.25 19.40 5.63 4.33 5.51 2.21 7.60 6.19 8.09 7.84 5.85 7.30 0.00 8.90 16.58 4.21 7.17 4.80 9.14 3.15 3.12 8.62 35 ER2g ExonRegion 0 14.91 6.84 20.78 9.35 9.61 10.84 4.93 8.25 2.64 15.85 11.69 3.35 5.33 2.44 10.68 14.59 21.01 6.22 14.91 3.09 8.92 12.50 12.81 36 ER2h ExonRegion 0 17.97 6.23 38.04 17.57 11.59 16.85 12.15 6.75 3.27 25.18 11.84 7.83 3.13 10.96 19.62 17.41 8.28 10.00 8.04 7.02 9.65 7.64 14.68 37 E2_Dd KnownBoundary 0 6.59 9.67 41.78 14.02 36.67 14.88 17.84 7.97 2.29 32.29 4.21 12.30 0.00 15.01 18.79 11.96 0.00 1.82 3.67 9.14 18.72 8.02 12.04 38 ER2i ExonRegion 0 8.35 33.44 48.62 19.85 39.47 35.88 26.06 18.54 10.04 28.91 17.40 5.07 12.10 18.14 28.88 25.23 18.61 8.78 12.81 8.10 22.26 24.27 15.32 39 E2_Af KnownBoundary 0 20.23 62.49 49.47 32.66 43.55 18.00 9.19 31.50 10.39 37.98 14.95 0.00 0.00 14.13 50.07 32.64 9.54 16.91 31.44 5.56 23.54 31.05 23.73 40 ER2j ExonRegion 0 196.29 200.17 551.80 277.70 279.47 610.70 398.89 172.31 151.89 169.42 575.09 64.94 66.67 426.22 761.74 432.16 553.30 107.87 149.11 135.42 405.69 369.15 180.72 41 E2_De KnownBoundary 0 0.00 2.70 26.23 5.43 12.56 15.67 2.03 15.94 13.45 7.01 10.21 5.85 6.82 4.77 8.90 0.00 0.00 1.82 20.24 3.26 2.84 8.27 3.67 42 E2e_E2g KnownJunction 1 838.30 228.12 490.85 198.48 128.86 156.90 127.94 125.56 114.38 142.80 416.05 81.48 148.53 239.21 629.95 167.99 425.53 32.96 71.91 120.74 296.28 250.87 50.53 43 ER2k ExonRegion 0 11.48 3.99 27.21 10.15 12.66 9.89 8.32 8.51 8.71 10.16 9.03 3.81 4.25 6.58 11.59 9.40 9.32 4.11 9.02 5.27 4.53 7.92 8.74 44 E2_Ag KnownBoundary 0 14.97 9.08 8.81 5.09 18.76 4.77 13.03 9.49 5.79 8.38 7.05 0.00 0.00 2.47 9.64 3.85 0.00 3.98 4.61 5.62 3.03 3.12 8.71 45 ER2l ExonRegion 0 905.42 121.15 299.32 180.42 106.89 117.15 78.03 84.40 72.52 86.67 244.36 54.44 65.97 194.08 425.65 306.09 221.01 99.15 91.70 60.33 151.36 189.51 97.51 46 E2_Df KnownBoundary 0 44.75 14.41 34.27 29.87 27.42 34.41 38.86 19.51 25.06 17.86 11.06 0.00 6.82 11.36 37.33 15.47 9.16 18.28 17.60 8.95 5.75 20.88 19.97 47 ER2m ExonRegion 0 22.64 2.30 8.84 8.18 14.77 17.78 14.51 7.36 6.28 6.08 6.22 0.75 5.30 10.03 29.77 11.76 5.31 7.23 10.80 3.89 4.12 12.77 9.07 48 ER2n ExonRegion 0 1.65 0.00 0.54 2.42 2.38 6.11 3.53 1.73 1.92 2.42 0.00 0.00 1.04 2.35 6.77 0.00 0.37 0.21 3.54 1.65 1.96 2.08 0.00 49 IG3 Intergenic 0 44.95 13.74 26.01 20.75 26.05 30.54 16.93 23.00 19.69 18.29 8.09 11.12 9.28 15.43 19.51 8.85 9.82 12.86 17.42 12.49 11.87 9.89 12.05 50 IG3_AR1 ActiveIntergenicRegion 0 45.09 13.78 26.09 20.82 26.13 30.63 16.99 23.07 19.75 18.34 8.11 11.16 9.31 15.48 19.57 8.87 9.86 12.90 17.48 12.53 11.91 9.92 12.09