Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	THNSL2	Gene	0	17.22	3.13	2.58	12.52	2.00	30.22	1.76	0.64	42.48	11.82	0.06	0.68	1.76	0.65	0.93	0.28	0.53	34.96	25.43	11.51	12.67	31.33	3.42
2	402102	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	377254	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	358591	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	419759	Transcript	0	0.00	0.00	0.00	0.00	0.00	2.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	449349	Transcript	0	0.00	0.00	0.00	0.00	0.00	2.41	0.00	0.00	3.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.06	0.00	0.00	1.54	3.09	0.00
7	343544	Transcript	0	6.26	0.00	0.97	0.40	0.00	8.79	0.00	0.00	6.97	0.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.75	6.78	1.25	2.22	6.45	0.00
8	324166	Transcript	0	13.38	2.65	1.37	7.67	2.03	31.83	1.66	0.83	46.91	11.92	0.00	0.00	1.29	0.42	0.00	0.00	1.00	44.56	32.99	13.13	10.83	42.76	4.31
9	475910	Transcript	0	7.14	3.93	0.96	8.57	1.41	5.92	2.36	0.38	4.69	2.95	0.23	2.52	4.00	1.75	2.79	0.96	0.48	9.35	8.04	5.07	1.94	2.60	2.15
10	496844	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	476349	Transcript	0	5.60	0.27	0.25	2.96	1.80	4.62	0.56	0.00	8.47	2.61	0.00	0.00	0.44	0.00	0.00	0.00	0.00	6.76	3.67	2.97	4.71	8.93	0.44
12	464022	Transcript	0	4.78	0.73	0.00	0.73	0.49	5.09	1.88	0.00	5.09	0.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.65	0.80	0.76	0.00	4.36	0.00
13	496165	Transcript	0	1.85	0.00	0.81	0.72	0.00	0.00	0.39	0.00	0.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.93	0.00	0.00	0.00	0.00
14	ER1a	ExonRegion	0	0.56	0.00	0.00	0.00	0.00	14.14	0.00	0.00	0.00	0.94	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.95	0.41	0.05	0.77
15	E1_Ab	KnownBoundary	0	2.89	0.00	0.00	0.00	0.00	54.12	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.00	0.00	0.00	0.00
16	ER1b	ExonRegion	0	5.17	0.00	0.00	0.00	2.02	61.94	0.00	0.00	0.00	6.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.02	18.80	10.23	5.87
17	E1_Ac	KnownBoundary	0	10.30	0.00	0.00	0.00	4.16	53.89	0.00	0.00	0.00	11.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.40	0.00	6.52	26.56	15.49	0.00
18	ER1c	ExonRegion	0	1.24	0.00	0.00	0.00	0.78	12.05	0.00	0.00	0.11	3.24	0.00	0.00	0.00	0.03	0.00	0.00	0.00	0.00	0.00	2.05	6.46	4.85	0.10
19	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E1a_E3b	KnownJunction	0	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	I1	Intron	0	2.80	0.13	0.24	3.90	0.18	12.75	0.61	0.85	24.99	6.80	0.00	0.47	0.00	0.09	0.00	0.00	0.22	32.00	19.62	9.02	8.77	24.30	2.33
22	I1_AR1	ActiveIntronRegion	0	2.77	0.14	0.25	3.98	0.18	13.16	0.64	0.83	25.55	6.95	0.00	0.49	0.00	0.09	0.00	0.00	0.23	32.89	20.11	9.29	9.08	24.58	2.36
23	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	8.86	0.00	24.87	0.00	2.09	57.58	11.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	71.34	46.68	26.91	17.85	68.15	4.10
24	I1_SR1	SilentIntronRegion	0	3.88	0.00	0.00	1.99	0.00	1.07	0.00	1.51	9.68	2.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.93	5.97	1.42	0.00	17.71	1.71
25	ER2a	ExonRegion	0	1.33	0.00	0.00	0.00	0.00	10.66	1.67	0.00	3.49	5.27	0.00	0.00	0.00	0.82	0.00	1.87	0.00	6.20	13.96	11.87	2.72	21.89	0.00
26	E2_Da	NovelBoundary	0	0.00	0.00	0.00	8.06	0.00	8.57	0.00	0.00	45.75	22.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	72.13	30.59	9.40	22.55	48.99	3.41
27	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E2a_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	I2	Intron	0	5.68	0.68	0.00	3.41	0.90	10.46	0.44	0.00	22.23	7.45	0.00	0.00	0.00	0.45	0.00	0.00	0.00	27.42	9.62	11.42	6.65	16.08	0.00
30	I2_AR1	ActiveIntronRegion	0	5.76	0.69	0.00	3.45	0.91	10.60	0.45	0.00	22.52	7.55	0.00	0.00	0.00	0.45	0.00	0.00	0.00	27.79	9.75	11.57	6.74	16.28	0.00
31	E3_Aa	NovelBoundary	0	9.71	6.31	0.00	3.96	4.33	14.25	5.52	0.00	40.88	17.81	0.00	0.00	0.00	0.00	0.00	3.67	0.00	81.91	86.97	17.39	22.98	96.87	7.43
32	ER3a	ExonRegion	0	13.38	2.65	1.37	7.67	2.03	31.83	1.66	0.83	46.91	11.92	0.00	0.00	1.29	0.42	0.00	0.00	1.00	44.56	32.99	13.13	10.83	42.76	4.31
33	E3_Ab	KnownBoundary	0	10.22	0.00	1.69	5.69	0.00	33.22	1.85	2.34	25.61	8.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	55.13	31.44	9.14	16.87	53.15	3.76
34	ER3b	ExonRegion	0	23.36	1.78	1.79	4.76	0.07	23.25	1.02	1.56	29.63	10.90	0.00	0.00	0.00	0.00	0.00	0.00	1.50	42.00	35.78	8.99	18.87	29.41	2.91
35	E3_Ac	KnownBoundary	0	45.27	0.00	3.55	4.93	0.00	23.74	0.00	0.00	33.65	14.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	33.20	30.78	18.28	16.06	35.45	4.10
36	E3_Ad	KnownBoundary	0	24.60	3.03	1.39	14.88	4.33	10.90	2.12	0.00	36.66	6.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	13.72	50.92	18.54	17.79	32.82	0.00
37	ER3c	ExonRegion	0	31.84	2.40	3.40	11.52	2.68	19.67	1.08	0.16	45.64	14.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	31.24	44.02	21.86	18.03	47.92	2.94
38	ER3d	ExonRegion	0	24.85	2.77	7.17	16.74	2.06	37.02	1.01	3.91	51.64	14.47	0.00	0.00	1.69	0.00	0.00	0.00	0.00	38.49	37.33	17.79	8.57	49.59	3.02
39	E3_Da	NovelBoundary	0	3.78	5.79	0.00	1.90	0.00	0.00	0.00	0.00	6.39	6.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.12	18.82	6.52	13.53	8.14	0.00
40	E3a_E4a	KnownJunction	0	43.79	0.00	9.37	14.28	0.00	69.22	1.94	0.00	47.40	18.51	0.00	0.00	6.01	0.00	0.00	0.00	0.00	45.89	37.18	4.99	8.28	27.62	0.00
41	I3_AR1	ActiveIntronRegion	0	2.62	1.96	0.25	3.35	1.47	8.07	0.00	0.00	8.10	4.23	0.00	0.00	1.06	0.00	0.00	0.00	0.00	4.30	3.94	3.21	0.60	7.45	1.61
42	ER4a	ExonRegion	0	40.24	5.56	8.64	20.53	2.61	54.23	2.42	1.67	83.70	21.59	0.00	0.00	2.33	0.00	0.78	0.00	0.00	76.78	56.08	27.96	21.80	73.43	3.42
43	E4_Da	KnownBoundary	0	57.05	3.35	3.67	26.64	4.33	91.37	2.25	0.00	125.23	36.69	0.00	0.00	6.82	0.00	0.00	0.00	0.00	85.39	62.50	32.85	27.37	58.97	10.93
44	ER4b	ExonRegion	0	45.75	2.03	6.98	28.10	0.00	74.20	2.65	0.00	110.21	31.14	0.00	0.00	4.33	0.00	0.00	0.00	0.00	85.85	55.62	34.04	26.61	64.27	5.87
45	E4_Db	NovelBoundary	0	0.00	0.00	1.63	8.99	0.00	5.79	0.00	0.00	3.50	1.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	14.67	9.32	0.00	3.15	2.94	0.00
46	E4b_E5a	KnownJunction	0	42.30	0.00	7.33	31.90	0.00	71.83	3.53	0.00	128.70	27.02	0.00	0.00	6.82	0.00	5.19	0.00	0.00	109.98	62.68	32.73	19.83	116.47	0.00
47	ER4c	ExonRegion	0	31.83	0.98	7.35	26.77	0.21	71.81	2.65	0.00	118.47	31.29	0.00	0.00	2.81	0.00	2.67	0.00	0.00	83.67	67.78	31.40	28.12	85.26	4.82
48	ER5a	ExonRegion	0	38.84	13.21	8.37	33.97	5.60	91.22	2.00	0.98	132.30	37.91	0.00	0.00	5.76	0.32	0.36	0.00	0.00	117.78	68.77	41.08	38.56	84.09	4.68
49	E5_Da	KnownBoundary	0	0.00	0.00	0.00	5.49	0.00	5.56	1.99	0.00	3.59	2.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.14	9.60	5.82	0.00	3.12	0.00
50	E5a_E6a	KnownJunction	0	61.94	3.35	14.19	26.27	7.89	106.70	6.09	1.73	122.60	44.11	0.00	0.00	0.00	2.47	0.00	0.00	0.00	101.64	67.20	37.71	48.25	77.15	7.77
51	ER5b	ExonRegion	0	7.14	3.93	0.96	8.57	1.41	5.92	2.36	0.38	4.69	2.95	0.23	2.52	4.00	1.75	2.79	0.96	0.48	9.35	8.04	5.07	1.94	2.60	2.15
52	ER6a	ExonRegion	0	54.27	2.78	10.61	39.89	5.61	89.65	3.36	2.81	134.33	32.22	0.00	0.00	1.23	0.42	0.00	0.00	1.06	114.40	62.51	33.00	43.98	83.58	5.96
53	E6_Ab	KnownBoundary	0	70.61	0.00	1.30	45.62	8.15	102.55	8.30	4.07	106.94	37.47	0.00	0.00	6.01	2.47	0.00	0.00	0.00	78.51	71.63	26.53	38.73	81.69	8.37
54	ER6b	ExonRegion	0	52.31	5.81	5.64	28.97	4.46	75.80	3.89	0.55	94.26	30.82	0.00	0.00	0.37	0.28	0.00	0.00	4.35	33.61	49.35	18.61	37.81	69.72	6.11
55	E6a_E7c	KnownJunction	0	57.05	5.85	10.70	37.89	7.98	130.38	1.81	0.00	120.60	37.34	0.00	0.00	0.00	0.00	0.00	0.00	4.39	75.15	67.86	13.74	50.04	92.34	8.71
56	E6a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	4.83	0.00	0.00	7.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00	0.00	3.09	6.18	0.00
57	ER7a	ExonRegion	0	4.78	0.73	0.00	0.73	0.49	5.09	1.88	0.00	5.09	0.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.65	0.80	0.76	0.00	4.36	0.00
58	E7_Ab	KnownBoundary	0	3.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.42	0.00	0.00	0.00	0.00
59	E7_Ac	KnownBoundary	0	6.74	0.00	0.00	0.00	0.00	2.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.03	0.00	0.00	0.00	2.82	0.00
60	ER7b	ExonRegion	0	30.69	2.03	3.68	17.04	5.35	52.26	1.32	0.00	55.58	18.35	0.00	0.00	0.00	0.00	0.00	0.00	1.65	25.87	27.08	6.38	19.83	37.50	2.94
61	ER7c	ExonRegion	0	45.81	10.22	6.39	41.30	4.48	104.15	2.64	0.89	127.24	32.65	0.00	0.00	0.00	0.00	0.00	0.00	0.87	64.02	54.47	18.17	39.52	69.49	6.37
62	E7a_E8a	KnownJunction	0	67.05	10.98	11.00	32.90	3.82	102.95	0.00	0.00	139.35	33.23	0.00	0.00	0.00	0.00	0.00	0.00	4.77	86.26	67.86	13.87	21.44	98.16	15.37
63	ER8a	ExonRegion	0	65.26	2.70	9.16	44.04	2.46	84.97	3.52	0.00	132.03	37.67	0.00	0.00	0.00	0.04	0.02	0.00	0.71	87.30	59.23	20.65	43.15	79.36	5.38
64	E8_Da	KnownBoundary	0	6.15	0.00	0.00	0.00	0.00	0.00	1.90	0.00	6.57	3.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.76	12.89	7.99	0.00	3.06	3.50
65	E8a_E9a	KnownJunction	0	0.00	0.00	1.39	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	E8a_E10a	KnownJunction	0	10.30	2.63	1.15	3.30	0.00	14.14	1.81	0.00	35.82	5.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	14.30	8.75	2.94	11.61	27.86	4.35
67	E8a_E11a	KnownJunction	0	3.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	E8a_E12a	KnownJunction	0	44.08	3.35	1.48	21.14	0.00	52.58	0.00	0.00	98.03	15.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	41.70	31.81	17.19	3.03	37.90	0.00
69	E8_Db	KnownBoundary	0	14.52	0.00	0.00	1.43	0.00	2.44	0.00	0.00	1.79	1.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.74	4.33	0.00	0.00	3.00	0.00
70	ER8b	ExonRegion	0	13.76	0.00	0.00	1.36	0.00	1.83	1.32	0.00	7.41	4.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.31	12.74	6.38	5.51	4.17	2.94
71	ER8c	ExonRegion	0	5.60	0.27	0.25	2.96	1.80	4.62	0.56	0.00	8.47	2.61	0.00	0.00	0.44	0.00	0.00	0.00	0.00	6.76	3.67	2.97	4.71	8.93	0.44
72	E8_Dc	NovelBoundary	0	0.00	0.00	0.00	4.10	4.33	5.79	0.00	0.00	10.82	5.05	0.00	0.00	0.00	2.41	0.00	0.00	0.00	0.00	16.94	3.26	6.18	24.68	0.00
73	E9_Aa	NovelBoundary	0	7.04	6.71	0.00	3.76	0.00	4.77	0.00	0.00	12.82	1.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.56	0.00	22.47	0.00
74	ER9a	ExonRegion	0	3.70	0.00	0.23	0.08	0.00	0.00	0.78	0.00	1.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	0.00	0.00
75	E10_Aa	NovelBoundary	0	14.00	0.00	1.27	7.99	0.00	2.61	0.00	0.00	6.05	1.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.88	4.14	0.00	0.00	8.70	0.00
76	ER10a	ExonRegion	0	10.03	0.80	1.16	4.47	0.90	21.39	0.53	0.00	28.93	10.32	0.00	0.00	1.30	0.42	0.00	0.00	0.00	12.67	10.86	2.65	13.02	28.05	3.94
77	E10a_E12a	KnownJunction	0	6.82	0.00	0.00	1.37	0.00	4.94	0.00	0.00	12.01	4.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.76	3.67	0.00	11.31	21.37	4.35
78	E11_Aa	NovelBoundary	0	10.30	2.57	1.39	8.92	12.05	7.89	1.81	0.00	24.65	14.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	14.01	30.87	15.15	3.03	16.90	4.35
79	ER11a	ExonRegion	0	12.89	0.00	1.32	3.48	0.00	9.20	1.44	0.00	18.39	6.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.60	7.05	6.78	5.41	20.76	3.19
80	E11_Da	KnownBoundary	0	12.74	0.00	0.00	3.90	0.00	2.16	0.00	0.00	18.37	9.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.66	4.52	11.31	6.12	19.17	3.93
81	ER11b	ExonRegion	0	5.84	0.00	1.11	1.20	0.00	9.06	0.00	0.00	10.40	2.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.14	7.82	3.74	4.14	10.42	0.00
82	E11_Db	NovelBoundary	0	0.00	0.00	1.83	5.63	0.00	7.10	0.00	0.00	8.83	3.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.39	17.04	12.91	6.30	14.45	3.93
83	E11b_E12a	KnownJunction	0	10.82	0.00	1.80	0.00	0.00	17.32	0.00	0.00	10.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	12.52	0.00	2.53	8.94	0.00
84	I11	Intron	0	6.86	0.00	0.00	1.80	1.58	4.32	0.78	0.00	5.43	1.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.69	9.39	4.39	5.20	7.98	1.73
85	I11_SR1	SilentIntronRegion	0	6.94	0.00	0.00	1.82	1.60	4.38	0.79	0.00	5.49	1.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.76	9.50	4.44	5.26	8.08	1.75
86	ER12a	ExonRegion	0	39.77	4.46	7.83	30.59	4.21	74.19	1.44	0.62	103.35	26.73	0.00	0.00	0.00	0.32	1.27	0.00	0.00	76.33	49.97	20.61	32.10	54.29	7.40
87	E12_Da	KnownBoundary	0	53.57	2.76	2.84	29.33	0.00	79.39	0.00	0.00	90.68	17.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	89.54	85.74	19.56	34.84	27.19	3.50
88	ER12b	ExonRegion	0	14.52	1.10	1.79	15.95	1.33	26.42	0.44	0.43	59.73	14.20	0.00	0.00	0.00	0.00	1.07	0.00	0.00	31.34	22.45	9.35	16.38	38.35	3.50
89	ER12c	ExonRegion	0	2.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00