Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 COX5B Gene 0 281.50 125.66 435.47 248.85 134.84 286.02 115.74 143.59 133.61 210.99 401.98 52.90 43.20 399.37 612.60 511.12 339.61 204.38 530.89 182.68 242.11 258.83 215.56 2 258424 Transcript 1 294.72 129.70 234.90 99.87 133.11 322.59 123.71 66.10 62.33 104.00 276.17 12.75 28.64 305.93 650.30 335.53 275.83 86.37 343.90 126.86 265.13 147.78 139.27 3 464949 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 0.00 0.00 0.00 0.00 0.00 0.00 3.85 0.00 1.74 0.00 0.00 0.00 0.00 0.00 4 491989 Transcript 0 1.57 0.50 0.90 1.01 0.66 2.27 0.33 1.23 0.46 0.85 0.96 0.00 0.00 4.64 6.59 2.21 3.27 0.46 0.79 0.00 2.18 2.88 7.27 5 494306 Transcript 0 28.27 7.67 6.95 6.86 10.14 8.76 8.45 6.69 7.49 10.05 9.51 5.35 8.24 26.36 20.75 17.97 16.50 2.51 5.32 6.27 7.07 9.66 12.54 6 ER1a ExonRegion 1 760.60 320.57 354.87 188.76 375.76 872.16 346.60 93.99 94.15 147.42 556.31 0.82 7.04 780.59 1650.91 914.95 587.16 204.65 942.70 253.15 441.84 377.12 391.99 7 E1_Ab KnownBoundary 1 4045.38 1283.98 1282.81 735.57 1449.07 2930.19 1358.75 383.18 338.77 535.01 2048.73 6.15 8.28 2188.19 5708.53 3529.93 1997.57 1156.22 3754.27 989.37 1341.93 1565.25 1580.24 8 ER1b ExonRegion 1 1498.10 553.33 1181.12 577.76 476.75 1214.19 501.19 335.38 335.88 507.38 1082.78 7.76 30.89 1322.02 1897.01 1873.80 1187.64 511.30 2074.61 579.58 872.50 849.10 862.03 9 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 0.00 0.00 0.00 0.00 0.00 0.00 3.85 0.00 1.74 0.00 0.00 0.00 0.00 0.00 10 E1a_E3c KnownJunction 1 113.58 58.54 339.76 103.18 11.97 81.83 14.04 96.20 88.22 154.38 267.59 37.21 76.13 130.26 291.98 89.29 236.56 49.79 81.79 122.53 351.39 62.15 23.22 11 ER2a ExonRegion 0 3.14 1.01 1.81 2.01 1.32 4.54 0.66 2.47 0.91 1.69 1.91 0.00 0.00 9.27 13.18 4.41 6.54 0.91 1.58 0.00 4.36 2.63 14.54 12 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 13 ER3a ExonRegion 0 11.35 3.46 5.52 4.14 3.51 5.64 3.13 1.86 3.82 8.40 2.21 0.56 2.62 22.51 16.43 9.15 11.45 0.02 1.41 2.16 4.18 5.68 8.01 14 E3_Ab KnownBoundary 0 44.53 3.35 10.88 9.09 16.55 14.14 4.11 3.94 11.95 22.73 4.53 6.00 0.00 41.91 8.78 23.16 18.42 1.78 4.61 3.07 5.93 8.27 20.83 15 ER3b ExonRegion 0 26.55 14.86 5.67 7.95 10.56 8.82 6.36 9.35 8.31 15.83 20.17 17.55 22.88 36.70 66.32 29.92 20.18 7.28 7.23 15.62 9.86 11.79 25.19 16 E3_Da KnownBoundary 0 294.42 382.83 489.19 549.18 366.89 245.65 648.18 566.58 571.52 449.08 157.25 81.18 58.11 58.92 115.46 317.69 265.45 733.02 287.54 448.32 203.74 142.74 438.68 17 E3a_E3c KnownJunction 0 0.00 0.00 5.32 0.00 3.90 0.00 0.00 9.16 1.79 3.73 7.69 0.00 7.14 4.65 13.35 8.72 0.00 2.36 0.00 5.82 2.72 0.00 3.33 18 ER3c ExonRegion 0 45.19 11.88 8.38 9.58 16.77 11.88 13.78 11.52 11.16 11.71 16.80 10.14 13.86 30.21 25.07 26.79 21.56 5.00 9.23 10.38 9.97 13.64 17.06 19 E3_Ac KnownBoundary 0 86.16 44.79 17.50 23.11 12.90 28.00 16.08 15.36 24.28 21.46 8.69 12.60 26.30 36.85 46.23 22.73 22.63 0.00 12.61 9.20 8.15 22.66 27.74 20 ER3d ExonRegion 1 78.02 135.89 1128.45 431.79 82.98 170.32 85.06 391.34 377.08 637.14 1911.74 107.52 67.40 816.73 1208.67 477.94 1634.03 322.17 499.75 558.61 1273.99 279.28 197.92 21 E3b_E4a KnownJunction 1 31.71 170.36 2587.64 1132.39 186.16 348.44 171.35 829.53 736.10 1266.38 2823.82 226.42 122.72 2062.76 3064.85 1582.06 2779.89 929.76 1895.21 1242.87 1626.91 894.99 684.78 22 ER4a ExonRegion 0 46.12 132.82 2259.23 1164.33 211.03 312.23 134.24 785.95 652.60 1095.90 1824.86 199.04 117.87 3417.79 4717.36 3515.48 1581.04 1348.03 4279.96 1213.38 948.81 1775.10 1443.75 23 E4_Da KnownBoundary 1 102.98 138.73 2482.94 1479.10 354.41 321.69 138.01 882.56 663.56 1100.43 1027.47 241.28 204.21 3749.09 6090.50 5405.33 763.72 1745.27 6696.38 1172.24 449.37 2408.44 2270.15 24 ER4b ExonRegion 1 53.97 103.65 1844.89 1197.29 527.55 501.99 123.56 670.70 542.95 796.17 995.13 329.88 358.48 1344.17 2300.60 3249.54 641.76 1493.16 2612.72 701.37 503.51 953.98 1346.21 25 E4_Db NovelBoundary 1 36.75 8.81 40.09 13.82 49.41 15.22 8.35 18.20 11.05 13.81 7.79 12.75 27.60 13.66 13.72 20.34 14.31 11.28 38.40 18.54 0.00 17.08 11.78 26 E4b_E5a KnownJunction 1 34.30 73.74 1801.77 1225.45 911.04 1065.58 223.99 546.08 515.10 749.74 787.83 335.06 277.74 1147.69 1825.21 1699.72 509.30 908.45 1545.27 486.22 531.53 996.33 573.55 27 I4_SR1 SilentIntronRegion 0 72.64 24.48 6.28 9.10 10.56 19.84 13.17 9.32 10.74 2.64 17.50 11.91 12.81 11.80 12.69 15.66 16.33 9.70 9.56 6.99 3.07 11.72 9.54 28 ER5a ExonRegion 0 830.27 412.45 1094.56 705.76 371.91 989.74 388.40 332.07 332.92 537.40 860.61 173.96 91.43 588.89 911.02 623.47 583.51 329.59 761.72 299.69 397.75 609.00 216.07 29 E5_Da KnownBoundary 0 5067.86 806.76 719.08 734.47 361.97 402.44 228.14 172.72 207.23 268.19 872.48 97.98 104.38 762.91 1437.79 1159.95 644.97 324.33 1371.62 309.23 354.48 650.54 367.92 30 E5_Db KnownBoundary 0 6.45 3.29 6.92 5.89 8.49 5.79 2.25 2.55 0.00 10.64 4.95 0.00 0.00 4.94 4.45 0.00 0.00 8.75 0.00 0.00 0.00 0.00 0.00 31 ER5b ExonRegion 0 2912.50 419.43 624.73 634.65 208.93 225.40 110.88 126.90 160.67 214.76 618.04 68.55 71.13 482.36 885.12 799.25 467.63 296.56 981.09 176.95 239.84 435.63 236.89 32 ER5c ExonRegion 0 9.99 9.99 10.08 7.65 11.59 13.77 10.50 8.11 4.62 10.20 4.62 0.23 2.76 6.94 7.99 2.35 3.77 4.66 7.22 4.90 2.15 4.08 2.60