Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CHST10 Gene 0 21.43 89.34 78.50 62.40 33.83 97.36 40.55 45.25 48.34 69.29 135.05 45.41 32.79 46.36 48.49 14.61 23.70 70.81 45.27 57.98 60.61 22.36 17.44 2 264249 Transcript 0 22.52 71.08 77.47 61.41 32.52 89.22 35.01 42.99 41.14 56.40 105.92 25.34 23.49 36.44 45.87 11.05 19.71 53.70 38.47 47.29 50.03 16.22 13.95 3 485085 Transcript 0 0.27 0.52 0.91 0.00 0.00 1.43 0.17 0.00 0.49 1.12 1.38 0.00 0.00 0.34 0.00 0.00 0.42 1.41 0.41 0.67 0.97 0.27 0.00 4 484382 Transcript 0 0.00 0.00 1.63 2.06 0.00 0.00 0.00 0.00 0.00 1.45 2.68 0.00 6.82 0.00 0.00 0.00 0.00 3.98 4.61 0.00 0.00 0.00 0.00 5 487860 Transcript 0 0.29 0.76 1.11 2.06 0.00 2.89 2.27 0.51 1.57 2.39 3.53 0.00 0.53 0.74 0.28 2.88 0.00 2.25 1.76 2.83 2.47 0.00 1.62 6 435960 Transcript 0 0.00 0.68 0.25 0.21 0.00 0.69 0.37 0.00 0.47 0.28 1.43 0.36 0.01 0.46 0.00 0.00 0.00 0.88 0.80 0.69 3.89 0.00 0.30 7 418201 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.66 0.00 2.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 421474 Transcript 0 0.00 12.43 0.00 6.63 0.00 2.56 1.77 3.29 6.31 4.65 6.42 0.00 0.00 3.00 0.00 0.00 0.00 7.21 4.71 12.08 5.37 0.00 0.00 9 409046 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 466583 Transcript 0 0.00 0.00 0.43 0.00 0.00 0.00 0.00 0.00 2.48 0.00 3.22 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.59 0.00 0.00 0.00 11 448989 Transcript 0 0.00 0.45 0.02 0.00 0.00 1.25 4.97 0.37 0.34 0.49 1.55 0.00 0.00 0.09 0.00 0.00 0.00 1.61 0.23 2.32 0.89 0.68 0.02 12 409701 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 2.26 0.00 0.00 0.00 0.00 3.25 0.00 2.57 3.58 6.46 5.56 0.00 4.35 13 420858 Transcript 0 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1a ExonRegion 0 0.00 1.56 1.25 0.00 0.00 4.01 1.66 3.94 1.67 2.75 16.23 0.00 0.00 1.51 2.90 0.00 3.92 0.60 4.15 3.12 7.07 0.00 1.23 15 E1_Ab KnownBoundary 0 3.11 3.29 1.83 0.00 0.00 15.05 7.86 8.63 4.80 10.26 40.33 0.00 0.00 4.24 8.90 0.00 9.07 14.80 14.21 8.63 14.52 0.00 4.10 16 ER1b ExonRegion 1 2.70 7.70 2.80 0.67 0.85 24.57 5.43 2.90 2.28 9.32 30.77 0.00 0.67 9.93 9.90 0.95 12.40 8.34 13.04 9.85 12.96 2.59 0.61 17 E1_Ac KnownBoundary 0 0.00 12.23 8.25 3.36 0.00 10.05 6.23 4.11 4.69 20.82 28.90 0.00 6.82 4.53 19.90 3.16 20.29 15.63 23.25 19.88 21.07 2.45 3.93 18 ER1c ExonRegion 0 1.48 4.59 6.18 3.33 0.12 10.02 3.66 7.96 5.31 20.99 18.56 0.00 6.65 13.82 12.21 5.25 7.60 22.69 14.45 15.73 20.60 6.74 5.19 19 E1_Ad KnownBoundary 0 3.78 11.05 12.27 3.33 0.00 10.16 4.15 11.21 7.52 28.98 18.32 0.00 7.30 17.36 22.25 7.35 8.70 33.29 14.02 24.35 28.11 10.53 19.38 20 ER1d ExonRegion 1 2.31 16.46 20.52 11.12 2.84 28.08 10.43 12.10 10.73 40.64 80.15 0.68 3.52 30.40 29.83 7.62 29.91 55.09 20.90 40.49 47.31 16.60 16.43 21 E1a_E5a KnownJunction 1 6.37 43.08 43.05 21.48 6.88 60.31 20.80 15.16 18.32 67.05 148.83 13.80 6.82 57.86 35.97 11.54 53.48 70.64 33.98 68.52 73.82 25.29 19.38 22 ER1e ExonRegion 1 4.23 30.50 30.63 15.54 5.35 44.74 13.24 14.52 19.76 56.20 126.03 4.33 9.38 44.50 31.91 5.94 46.21 67.26 33.13 65.53 66.99 24.17 20.56 23 ER1f ExonRegion 0 0.00 2.30 1.01 0.00 0.00 0.56 0.92 0.00 0.00 0.40 2.19 0.00 0.00 0.00 0.00 0.00 0.00 1.29 3.19 1.67 3.26 0.00 0.00 24 E1_Ag KnownBoundary 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 6.30 0.00 4.01 25 E1_Ah KnownBoundary 0 0.00 8.68 3.40 0.00 3.23 29.24 4.50 0.00 3.99 2.55 9.00 0.00 0.00 2.35 0.00 0.00 0.00 2.57 3.95 0.00 0.00 0.00 0.00 26 ER1g ExonRegion 0 0.00 5.92 1.23 0.00 0.49 14.17 2.65 0.00 1.80 1.15 5.97 0.00 0.00 0.59 0.00 0.00 0.00 2.02 4.92 2.13 4.41 0.00 0.00 27 ER1h ExonRegion 0 0.00 8.13 1.23 0.00 2.68 23.84 2.65 0.00 2.47 1.15 9.66 0.00 0.00 1.62 0.00 0.00 0.00 3.70 6.37 2.13 4.41 0.00 0.00 28 ER1i ExonRegion 0 0.00 4.36 1.58 0.32 1.51 15.59 0.91 1.21 4.14 1.52 6.51 0.00 0.00 1.58 1.37 0.00 1.87 2.72 2.01 1.79 4.76 0.00 0.08 29 E1b_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 30 E1b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.66 0.00 2.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E1b_E5a KnownJunction 0 0.00 2.70 1.45 1.63 0.00 0.00 0.00 2.22 1.79 1.53 2.68 0.00 0.00 0.00 0.00 0.00 3.65 0.00 0.00 0.00 13.22 0.00 0.00 32 ER2a ExonRegion 0 0.00 0.00 0.85 0.00 0.00 0.00 0.00 0.00 4.96 0.00 6.44 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.00 1.17 0.00 0.00 0.00 33 E2_Ab KnownBoundary 0 0.00 0.00 2.99 0.00 0.00 0.00 0.00 1.68 10.50 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.75 0.00 0.00 0.00 34 ER2b ExonRegion 0 0.00 0.87 0.61 0.00 0.00 0.00 0.00 1.54 6.42 0.49 2.35 0.00 0.00 2.18 0.00 0.00 0.00 3.00 2.39 2.43 0.12 0.00 0.00 35 E2_Da KnownBoundary 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 2.34 2.89 1.48 2.05 0.00 0.00 2.24 0.00 0.00 0.00 4.77 3.76 0.00 0.00 0.00 0.00 36 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER2c ExonRegion 0 0.00 0.90 0.04 0.00 0.00 2.50 1.11 0.74 0.69 0.98 3.11 0.00 0.00 0.19 0.00 0.00 0.00 3.21 0.47 4.64 1.77 1.37 0.05 38 E2_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 13.23 0.00 0.00 0.00 0.00 2.32 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 9.78 0.00 2.63 0.00 39 ER2d ExonRegion 0 0.00 0.00 2.91 0.00 0.00 6.96 0.00 0.67 0.00 0.02 4.03 0.00 0.00 0.74 0.39 0.00 0.00 3.13 0.00 7.39 4.11 0.39 2.39 40 E2_Ad KnownBoundary 0 0.00 0.00 2.84 0.00 0.00 5.79 0.00 0.00 1.74 0.00 5.37 0.00 0.00 2.12 0.00 0.00 0.00 2.36 0.00 5.82 3.15 0.00 0.00 41 E2_Db KnownBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 2.55 0.00 1.45 2.68 0.00 0.00 2.47 0.00 0.00 0.00 2.40 0.00 2.94 3.15 0.00 0.00 42 E2b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 8.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER2e ExonRegion 0 0.00 0.00 3.06 0.00 0.00 3.67 4.57 1.73 0.00 1.15 5.89 0.00 1.28 1.62 2.90 0.00 0.00 3.70 0.00 7.74 4.61 0.00 0.00 44 ER2f ExonRegion 0 0.00 1.83 0.95 0.00 0.00 0.08 0.48 0.38 1.49 0.43 8.24 0.00 1.50 0.85 0.12 0.93 0.00 1.93 0.99 2.43 8.41 0.75 0.65 45 E2_Dc KnownBoundary 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 9.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.81 6.30 0.00 0.00 46 E2c_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 2.26 0.00 0.00 0.00 0.00 3.25 0.00 2.57 3.58 6.46 5.56 0.00 4.35 47 ER2g ExonRegion 0 0.00 0.42 0.00 0.83 0.00 2.20 0.54 0.00 1.90 0.71 3.53 1.45 0.04 1.84 0.00 0.00 0.00 2.25 0.00 1.09 9.77 0.00 1.20 48 E2d_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER3a ExonRegion 0 0.00 3.80 1.08 1.03 1.32 5.10 0.76 1.48 5.16 1.15 6.02 2.40 2.41 0.50 1.78 0.00 0.00 3.14 1.61 2.92 0.73 1.05 0.00 50 E3a_E5a KnownJunction 0 0.00 8.88 2.93 0.00 0.00 14.14 2.25 2.55 4.40 0.00 10.27 0.00 6.82 0.00 0.00 0.00 0.00 4.81 0.00 8.12 0.00 0.00 0.00 51 ER4a ExonRegion 0 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 ER5a ExonRegion 0 9.65 39.67 49.24 36.08 21.45 73.97 30.11 29.76 37.07 68.44 166.03 84.61 45.55 44.10 50.94 11.84 41.40 89.04 40.82 76.99 105.96 33.34 27.08 54 E5_Da NovelBoundary 0 3.04 18.81 40.06 34.16 6.28 44.29 11.13 19.67 25.12 41.61 57.23 46.37 12.50 26.66 54.14 13.59 7.85 54.35 18.64 30.17 29.84 12.37 9.99 55 E5b_E6a KnownJunction 0 0.00 2.57 1.57 8.29 0.00 18.68 2.25 0.00 13.31 5.88 7.21 0.00 0.00 4.94 4.45 0.00 0.00 13.35 0.00 9.72 9.45 3.12 0.00 56 E5b_E9a KnownJunction 0 13.56 48.94 62.86 47.91 23.43 93.36 52.47 43.37 40.54 67.10 136.77 30.76 18.18 47.68 59.34 31.19 16.92 82.04 39.15 90.89 59.00 20.27 11.61 57 ER5b ExonRegion 0 4.41 43.38 56.98 47.13 22.74 102.23 39.83 36.73 45.08 68.53 141.26 50.51 17.20 48.59 72.53 22.04 24.21 79.15 25.22 80.50 71.62 24.65 16.89 58 ER6a ExonRegion 0 0.00 9.62 4.60 6.05 2.31 14.58 3.59 3.71 12.09 8.92 13.78 3.08 1.67 7.46 5.16 1.28 1.43 11.29 0.86 14.50 7.02 2.26 1.27 59 E6_Da KnownBoundary 0 0.00 3.09 4.08 1.83 0.00 6.47 3.67 2.55 1.27 3.14 2.32 0.00 0.00 0.00 0.00 0.00 0.00 2.20 0.00 3.26 0.00 0.00 0.00 60 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 1.16 2.04 2.32 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 2.49 2.53 0.00 0.00 61 E6a_E9a KnownJunction 0 0.00 12.43 0.00 6.63 0.00 2.56 1.77 3.29 6.31 4.65 6.42 0.00 0.00 3.00 0.00 0.00 0.00 7.21 4.71 12.08 5.37 0.00 0.00 62 ER6b ExonRegion 0 0.29 0.76 1.11 2.06 0.00 2.89 2.27 0.51 1.57 2.39 3.53 0.00 0.53 0.74 0.28 2.88 0.00 2.25 1.76 2.83 2.47 0.00 1.62 63 ER7a ExonRegion 0 1.08 2.07 3.64 0.00 0.00 3.58 0.66 0.00 0.80 2.45 3.21 0.00 0.00 1.36 0.00 0.00 1.68 3.95 1.62 0.17 1.34 1.06 0.00 64 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 ER9a ExonRegion 0 8.83 49.56 78.70 66.14 19.05 113.26 37.20 49.52 52.94 85.30 227.82 77.41 60.83 58.60 59.43 18.62 35.33 86.96 51.23 109.72 116.05 37.96 19.22 67 E9a_E10a KnownJunction 0 28.82 56.63 113.21 66.13 27.93 111.64 55.51 72.87 71.53 119.40 283.76 150.20 94.31 128.14 145.25 32.73 29.64 151.39 82.54 144.45 118.80 80.58 29.79 68 E9a_E11a KnownJunction 0 0.00 0.00 1.63 2.06 0.00 0.00 0.00 0.00 0.00 1.45 2.68 0.00 6.82 0.00 0.00 0.00 0.00 3.98 4.61 0.00 0.00 0.00 0.00 69 ER10a ExonRegion 0 18.61 55.53 99.87 70.80 23.53 90.87 49.49 75.19 88.47 123.48 320.02 134.40 51.08 95.58 88.80 28.46 32.83 149.83 94.73 135.78 128.13 57.41 38.62 70 E10a_E11a KnownJunction 0 26.08 92.94 110.79 86.17 33.79 161.50 61.47 63.75 93.20 120.15 373.83 73.07 41.39 78.52 72.93 35.29 74.80 175.93 101.09 135.38 119.54 57.50 23.30 71 ER11a ExonRegion 0 14.24 79.79 90.06 68.45 42.22 138.44 64.77 58.36 82.46 112.38 284.50 99.58 38.64 66.54 52.41 28.02 48.94 131.10 78.42 95.04 105.99 37.83 27.08 72 E11_Da KnownBoundary 0 9.78 101.50 74.54 40.22 40.24 134.47 77.86 58.33 74.91 98.45 229.37 107.74 42.53 56.68 22.75 16.32 26.18 97.21 77.93 107.38 105.76 19.41 27.15 73 E11_Db KnownBoundary 1 21.71 127.94 63.19 50.84 46.43 146.17 64.52 58.78 49.25 86.68 324.87 174.96 39.61 89.12 119.54 44.77 30.95 105.87 114.36 104.44 129.30 55.66 20.06 74 ER11b ExonRegion 0 11.34 115.48 83.85 54.13 40.71 156.79 72.35 73.27 80.86 118.62 303.67 129.57 48.24 74.07 69.42 34.71 31.95 127.43 99.88 112.84 141.82 38.02 25.17 75 ER11c ExonRegion 0 27.10 169.28 95.00 64.11 44.89 148.30 50.54 69.21 86.67 104.47 298.48 119.25 58.91 104.32 84.94 30.52 51.16 161.89 98.61 111.70 120.58 53.51 28.91 76 E11_Dc NovelBoundary 0 33.34 204.83 115.79 63.53 50.85 110.33 63.99 69.21 73.06 105.73 264.33 113.89 79.86 93.65 95.43 15.55 25.71 121.71 105.13 116.27 106.20 55.42 12.04 77 E11e_E12a KnownJunction 0 24.00 258.64 84.30 80.61 91.68 157.35 116.10 60.42 61.02 117.23 298.29 72.17 97.40 105.25 90.61 7.52 30.67 108.57 110.59 55.48 102.61 36.13 44.47 78 E11e_E13a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.68 2.01 0.00 2.95 2.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.63 79 ER11d ExonRegion 0 21.42 205.80 97.29 67.54 75.03 126.02 74.57 67.82 61.66 108.22 279.65 107.02 82.54 98.03 78.80 12.13 22.45 116.78 93.90 80.51 104.90 44.17 26.66 80 ER11e ExonRegion 0 16.23 211.49 100.89 69.96 88.30 124.09 83.85 63.38 63.81 108.57 279.63 79.37 70.35 96.91 65.76 8.92 27.51 103.47 95.56 62.41 102.11 36.11 47.97 81 I11 Intron 0 3.72 7.69 5.56 4.56 7.26 13.95 7.36 10.03 6.75 7.49 31.64 9.58 6.58 13.38 6.19 3.77 5.36 9.97 10.84 12.07 8.09 4.26 3.53 82 I11_SR1 SilentIntronRegion 0 1.44 5.09 3.03 1.92 2.84 13.22 5.68 7.98 5.08 6.46 23.93 9.97 7.88 12.17 5.38 1.45 2.83 9.13 10.61 8.93 7.58 5.88 4.30 83 I11_AR1 ActiveIntronRegion 1 2.21 7.33 5.13 2.76 6.49 13.37 5.93 6.44 7.47 7.90 34.13 10.15 5.93 13.32 4.25 3.52 5.79 7.79 11.32 10.12 6.24 3.01 2.75 84 I11_SR2 SilentIntronRegion 1 4.68 8.99 5.88 6.59 9.59 14.64 9.84 13.47 7.28 8.31 35.37 8.99 6.92 14.49 7.68 5.48 6.08 12.05 11.03 13.89 9.24 4.61 3.71 85 I11_AR2 ActiveIntronRegion 1 8.47 8.97 11.15 6.18 9.20 14.14 3.91 8.41 6.65 5.30 27.34 10.00 3.67 11.61 6.29 2.24 7.03 8.18 9.46 16.12 8.78 2.08 2.87 86 E12_Aa NovelBoundary 0 23.78 28.74 11.21 10.45 12.82 7.78 10.29 2.55 8.88 11.09 39.43 6.30 20.62 20.66 4.45 3.25 9.16 9.08 13.65 5.56 9.20 6.18 3.33 87 ER12a ExonRegion 0 21.90 189.66 81.41 72.67 60.03 155.77 75.90 71.14 70.20 106.63 207.35 121.67 70.97 80.15 73.33 27.67 41.01 119.48 66.83 98.39 81.37 30.31 38.43 88 E12_Da NovelBoundary 0 5.78 6.51 8.49 5.29 8.49 5.79 0.00 4.68 13.43 12.92 12.48 26.41 0.00 2.47 5.19 0.00 0.00 6.09 8.47 6.20 9.02 0.00 0.00 89 E12a_E13a KnownJunction 0 27.71 196.68 75.69 98.79 54.41 189.49 109.61 68.96 81.25 108.71 200.26 145.55 61.20 95.53 61.19 33.67 45.72 97.62 42.45 128.54 90.75 52.60 27.83 90 ER13a ExonRegion 0 41.50 245.82 153.01 124.09 68.86 192.63 93.11 89.08 101.39 162.34 288.77 119.97 82.08 101.06 83.62 32.35 51.59 153.55 92.24 105.93 115.90 49.34 38.44 91 E13_Da KnownBoundary 0 33.27 224.63 249.43 178.67 173.51 232.59 146.05 113.69 139.90 234.18 358.72 131.74 56.49 133.79 105.32 46.40 58.63 162.41 83.96 133.65 97.98 57.19 33.12 92 ER13b ExonRegion 0 45.05 140.60 153.68 122.83 65.05 174.44 68.36 82.03 80.62 110.05 195.62 50.69 46.98 71.38 88.84 22.11 35.51 106.80 72.79 91.46 92.99 32.44 26.68