Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 REEP1 Gene 0 36.63 268.04 96.14 125.49 86.45 545.78 194.11 204.29 385.02 129.19 1.02 2.32 0.59 0.52 0.02 7.18 0.24 119.69 38.11 182.87 0.45 4.02 1.15 2 453231 Transcript 0 0.00 0.00 0.00 0.00 0.00 6.42 0.01 0.00 0.59 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 165698 Transcript 0 21.89 186.44 57.35 85.39 54.57 439.86 141.10 150.57 330.51 113.26 0.34 0.81 0.47 0.43 0.01 9.75 0.12 155.79 23.59 184.43 0.20 2.88 0.47 4 428491 Transcript 0 0.00 0.00 1.83 1.96 4.07 0.00 0.00 5.59 2.72 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.58 0.00 0.00 0.00 5 437769 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 473407 Transcript 0 0.00 0.59 0.00 0.00 0.00 3.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 0.00 0.16 0.00 0.00 0.00 7 464751 Transcript 0 5.78 46.18 0.00 0.00 9.93 106.30 48.23 0.00 1.13 0.00 0.00 5.85 0.00 0.00 0.00 0.00 0.00 1.62 18.35 57.33 0.00 0.00 0.00 8 475475 Transcript 0 0.16 1.06 1.08 1.35 0.00 5.21 3.71 2.87 2.94 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 3.12 0.00 0.00 0.00 9 489855 Transcript 0 3.36 18.74 12.85 10.42 7.20 31.37 24.42 20.27 17.04 13.35 0.28 0.00 0.00 0.19 0.00 5.19 0.00 16.14 1.84 12.17 0.00 0.60 0.85 10 490915 Transcript 0 1.62 4.32 0.99 6.68 1.38 6.06 6.85 2.51 7.72 7.05 0.01 0.04 0.00 0.01 0.00 0.00 0.00 5.70 1.68 6.18 0.00 0.00 0.00 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 4.49 0.02 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 8.35 0.00 0.00 1.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.00 3.20 0.00 0.00 0.00 7.92 4.21 0.00 0.00 0.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.19 0.00 0.00 0.00 0.00 0.00 14 ER2b ExonRegion 0 3.12 47.36 1.48 1.72 4.79 194.38 23.66 6.19 14.11 2.23 0.00 0.00 0.00 0.00 0.00 1.25 0.00 47.07 0.84 23.85 0.00 0.00 0.00 15 E2_Ac KnownBoundary 0 7.48 111.89 3.13 3.53 16.64 515.61 38.47 12.73 37.38 3.01 0.00 0.00 0.00 0.00 0.00 3.67 0.00 114.00 3.76 55.93 0.00 0.00 0.00 16 ER2c ExonRegion 0 0.89 31.50 2.53 6.16 10.65 194.67 22.58 13.56 34.26 9.58 0.00 0.00 0.00 0.00 0.00 1.59 0.00 47.86 7.62 46.71 0.00 0.00 0.00 17 E2a_E5a KnownJunction 0 0.00 51.90 5.71 18.45 12.82 162.75 29.37 27.07 83.74 37.90 0.00 0.00 0.00 0.00 0.00 4.36 0.00 43.77 31.72 91.91 0.00 0.00 0.00 18 E2a_E6a KnownJunction 0 0.00 0.00 1.83 1.96 4.07 0.00 0.00 5.59 2.72 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.58 0.00 0.00 0.00 19 ER3a ExonRegion 0 0.00 0.59 0.00 0.00 0.00 3.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 0.00 0.16 0.00 0.00 0.00 20 E3a_E5a KnownJunction 0 0.00 6.38 0.00 0.00 0.00 33.62 0.00 0.00 1.27 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.00 0.00 0.00 21 ER3b ExonRegion 0 0.00 4.63 0.00 0.00 1.38 23.02 0.00 0.00 0.55 0.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 0.00 2.13 0.00 0.00 0.00 22 ER4a ExonRegion 0 0.31 2.11 2.17 2.71 0.00 8.04 3.08 3.73 4.09 3.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 2.98 0.00 0.00 0.00 23 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.38 4.33 2.01 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.05 0.00 3.26 0.00 0.00 0.00 24 ER5a ExonRegion 0 1.67 50.53 15.00 28.91 23.03 148.15 34.90 42.84 127.93 47.47 0.00 0.00 0.00 0.00 0.00 2.43 0.00 88.02 33.20 137.01 0.00 0.38 2.05 25 E5_Ab KnownBoundary 0 6.67 70.51 30.63 43.05 26.83 121.69 49.02 56.35 180.38 62.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 115.95 38.97 179.74 0.00 0.00 4.27 26 ER5b ExonRegion 0 7.88 60.35 41.11 56.97 17.33 128.55 49.75 92.69 282.44 82.20 1.35 9.31 0.00 0.00 0.00 1.86 0.00 236.19 40.69 221.49 0.00 5.10 2.06 27 E5a_E6a KnownJunction 0 6.45 72.49 65.76 77.81 14.35 170.41 72.74 144.29 402.80 114.41 2.68 6.30 0.00 0.00 0.00 7.43 0.00 322.47 48.19 301.94 0.00 7.78 0.00 28 ER6a ExonRegion 0 4.14 58.93 53.07 69.93 10.15 211.50 69.65 175.01 433.47 117.34 0.93 6.95 0.00 1.18 0.00 4.77 0.00 266.42 34.44 274.73 0.00 3.26 0.00 29 E6_Da NovelBoundary 0 7.33 52.62 44.08 61.93 23.68 222.26 60.19 189.19 410.44 115.48 0.00 6.30 0.00 2.24 0.00 0.00 0.00 153.09 21.55 186.00 0.00 3.12 0.00 30 E6b_E10b KnownJunction 0 5.78 46.18 0.00 0.00 9.93 106.30 48.23 0.00 1.13 0.00 0.00 5.85 0.00 0.00 0.00 0.00 0.00 1.62 18.35 57.33 0.00 0.00 0.00 31 E6c_E7b KnownJunction 0 15.11 86.04 31.58 60.23 8.66 447.07 100.43 124.37 370.14 117.79 0.00 12.60 0.00 0.00 0.00 0.00 0.00 111.22 17.79 269.79 0.00 0.00 0.00 32 E6c_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER6b ExonRegion 0 9.88 69.96 37.33 64.60 13.91 286.32 75.55 172.04 429.66 121.11 0.00 17.32 0.00 0.76 0.00 0.00 0.00 153.73 21.87 231.06 0.00 2.08 0.00 34 ER6c ExonRegion 0 9.52 70.01 32.38 56.46 12.42 376.58 75.94 134.20 388.88 112.48 0.41 16.70 0.00 0.23 0.00 0.00 0.00 131.19 19.34 234.80 0.00 1.49 0.00 35 ER7a ExonRegion 0 1.62 4.32 0.99 6.68 1.38 6.06 6.85 2.51 7.72 7.05 0.01 0.04 0.00 0.01 0.00 0.00 0.00 5.70 1.68 6.18 0.00 0.00 0.00 36 E7_Ab KnownBoundary 0 0.00 2.76 1.36 7.29 0.00 0.00 2.25 0.00 8.80 4.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 5.62 0.00 0.00 0.00 37 ER7b ExonRegion 0 10.02 100.19 61.23 92.48 23.57 480.96 80.25 184.09 498.04 146.51 1.50 5.92 0.00 1.50 0.00 10.63 0.00 272.68 57.44 314.18 0.00 4.43 1.81 38 E7a_E8a KnownJunction 0 10.59 82.22 47.72 64.06 21.48 359.17 101.44 185.57 425.72 144.41 0.00 6.30 0.00 0.00 0.00 8.03 0.00 255.35 47.53 275.74 0.00 8.57 4.35 39 ER8a ExonRegion 0 5.25 72.44 34.67 39.42 30.04 277.97 85.13 111.30 310.07 111.70 1.81 1.18 0.00 1.55 0.00 5.61 0.00 173.59 30.07 178.39 0.99 2.80 0.72 40 E8_Da KnownBoundary 0 0.00 9.41 17.39 11.72 4.24 2.90 18.37 9.04 20.40 18.24 0.00 0.00 0.00 0.00 0.00 11.11 0.00 20.40 4.05 3.00 0.00 0.00 0.00 41 E8a_E9a KnownJunction 0 6.59 100.25 44.47 49.58 3.82 215.78 70.26 98.41 301.33 92.62 2.11 0.00 0.00 2.47 0.00 8.03 0.00 229.65 49.98 195.52 0.00 0.00 0.00 42 ER8b ExonRegion 0 3.36 18.74 12.85 10.42 7.20 31.37 24.42 20.27 17.04 13.35 0.28 0.00 0.00 0.19 0.00 5.19 0.00 16.14 1.84 12.17 0.00 0.60 0.85 43 ER9a ExonRegion 0 7.58 100.06 39.85 56.19 13.88 263.38 76.56 112.50 321.99 114.46 0.00 0.00 0.00 1.67 0.00 12.75 0.00 365.35 32.92 263.30 1.18 4.62 0.00 44 E9_Da KnownBoundary 0 3.78 95.84 31.16 38.16 12.82 195.11 66.51 101.08 265.28 91.71 0.00 0.00 0.00 0.00 0.00 7.35 0.00 279.98 42.92 186.00 2.78 0.00 0.00 45 E9_Db KnownBoundary 0 3.70 80.64 18.07 19.84 3.99 123.96 57.01 55.94 141.72 55.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 94.22 32.38 150.59 0.00 0.00 0.00 46 ER9b ExonRegion 0 4.23 101.68 33.54 41.31 6.86 205.61 73.48 114.40 314.57 105.37 0.00 0.00 0.00 0.00 0.00 4.46 0.00 293.45 46.59 210.11 1.93 0.00 0.00 47 ER9c ExonRegion 0 2.27 84.68 25.15 33.03 8.73 270.31 65.85 88.52 251.40 91.15 0.00 0.00 0.00 0.00 0.00 0.99 0.00 204.44 30.26 142.05 0.00 3.08 0.00 48 E9_Dc KnownBoundary 0 3.56 46.18 5.14 16.31 7.72 138.95 49.82 15.36 99.28 30.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 95.67 12.52 56.82 0.00 2.82 0.00 49 E9_Dd KnownBoundary 0 0.00 60.32 5.06 17.98 16.21 154.17 51.54 50.15 135.27 63.05 0.00 0.00 0.00 0.00 0.00 7.26 0.00 123.53 12.61 58.68 0.00 2.45 0.00 50 ER9d ExonRegion 0 0.00 92.87 17.97 27.03 16.05 302.88 74.36 78.93 238.79 96.72 0.00 0.00 0.00 0.00 0.00 5.94 0.00 195.25 15.93 109.22 0.00 6.25 0.00 51 ER9e ExonRegion 0 1.32 101.36 19.17 43.40 15.28 302.37 81.09 92.65 266.57 106.05 0.00 0.00 0.00 0.00 0.00 10.90 0.00 206.91 14.02 162.74 0.00 3.98 0.00 52 E9e_E10a KnownJunction 0 3.56 127.54 24.75 63.23 20.20 369.73 90.58 124.58 334.52 128.32 0.00 0.00 0.00 0.00 0.00 15.55 0.00 234.83 8.28 246.66 0.00 2.69 0.00 53 ER9f ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 ER10a ExonRegion 0 19.71 179.88 41.98 72.77 54.64 540.18 166.56 151.98 422.00 132.37 0.00 0.23 1.03 1.09 0.00 14.13 0.00 244.31 29.13 242.34 0.00 2.51 0.00 55 E10_Ab KnownBoundary 0 19.41 221.14 76.31 145.84 47.20 490.23 177.14 206.48 536.45 172.72 2.32 6.00 0.00 0.00 0.00 13.07 0.00 267.95 70.12 261.29 0.00 2.63 3.76 56 ER10b ExonRegion 0 23.02 324.00 68.05 118.57 97.39 631.72 263.51 187.34 460.39 140.04 2.55 4.53 1.51 0.39 0.00 8.45 0.00 93.75 41.38 222.42 0.00 3.02 0.38 57 E10_Da KnownBoundary 0 32.67 507.61 77.61 133.62 125.64 829.30 371.14 213.75 491.78 121.71 2.37 0.00 0.00 0.00 0.00 7.26 0.00 41.41 43.20 206.84 0.00 6.25 0.00 58 ER10c ExonRegion 0 64.31 435.13 162.65 205.55 143.43 841.60 303.04 325.72 565.51 191.99 1.36 3.00 0.84 0.62 0.04 9.30 0.47 142.83 56.95 248.73 0.80 6.34 1.89