Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PPP3R1 Gene 0 108.88 134.30 132.92 164.36 163.91 219.25 209.75 125.31 117.09 126.64 125.73 208.89 182.71 155.76 94.20 94.54 102.71 68.19 71.69 107.08 48.17 113.51 64.40 2 406334 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 432181 Transcript 0 0.54 0.52 0.00 0.98 0.68 0.46 0.89 0.00 1.68 0.00 0.49 2.71 1.96 1.89 3.60 1.76 1.67 7.28 1.08 0.72 0.74 0.70 1.74 4 409752 Transcript 0 1.19 1.43 0.00 2.00 1.12 1.29 0.95 0.36 1.06 1.45 0.02 1.11 0.54 0.74 0.01 1.25 0.02 1.43 0.90 0.89 0.00 0.01 0.00 5 234310 Transcript 0 101.18 141.13 137.72 149.35 157.49 224.66 208.79 119.01 110.50 130.90 155.23 166.49 166.53 216.00 113.54 142.51 130.47 107.98 77.44 145.49 79.89 123.57 82.43 6 409377 Transcript 0 2.73 2.30 1.76 1.65 3.45 1.19 6.62 2.91 1.20 1.38 0.94 3.45 1.87 0.86 0.33 2.41 4.25 3.70 1.54 3.09 1.78 0.01 2.38 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.09 0.00 0.35 0.00 0.25 0.00 8 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 2.37 2.86 0.00 3.99 2.25 2.58 1.89 0.72 2.12 2.89 0.03 2.21 1.08 1.48 0.02 2.50 0.04 2.86 1.80 1.79 0.00 0.01 0.00 10 E2a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 0 3.63 2.11 14.90 4.16 2.73 1.30 4.10 5.31 5.67 10.47 3.30 2.97 5.25 6.38 9.71 11.16 5.61 3.45 2.17 8.61 0.01 1.36 1.02 12 E3a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E4_Aa NovelBoundary 0 0.00 0.00 23.12 8.89 7.56 55.65 0.00 13.10 8.16 25.73 29.80 6.30 0.00 14.72 35.23 76.13 38.24 46.93 84.61 42.89 7.60 28.96 51.64 14 ER4a ExonRegion 1 5.02 24.55 21.67 12.57 7.43 48.67 21.65 20.19 22.46 35.90 85.62 22.86 34.58 104.30 36.75 92.26 90.30 69.24 55.89 52.45 93.42 33.71 80.65 15 E4a_E6a KnownJunction 0 16.74 82.42 74.42 50.44 73.43 135.72 130.15 55.70 65.54 91.09 169.36 60.47 65.74 239.92 99.64 163.55 133.05 136.63 37.46 192.45 71.41 112.91 54.97 16 ER5a ExonRegion 0 5.45 4.61 3.52 3.30 6.91 2.38 13.25 5.82 2.41 2.75 1.87 6.91 3.74 1.73 0.66 4.82 8.50 7.39 3.08 6.18 3.56 0.03 4.76 17 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 I5_SR2 SilentIntronRegion 0 22.46 8.25 17.75 17.89 14.38 2.10 20.65 6.63 4.48 4.86 0.81 8.45 7.16 0.61 7.46 5.98 4.80 2.63 4.54 7.62 0.81 0.60 3.15 19 ER6a ExonRegion 0 23.97 88.16 75.70 82.39 75.19 141.02 156.00 84.48 104.65 140.41 219.43 143.31 72.23 219.66 70.21 151.13 170.33 118.72 59.41 199.10 95.09 139.28 74.66 20 E6a_E7a KnownJunction 1 32.97 103.80 65.02 98.99 108.40 203.24 201.43 93.11 134.32 145.99 224.16 224.62 89.12 222.56 74.17 122.53 193.55 74.86 89.60 199.42 124.67 161.84 96.37 21 E6a_E9a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 I6_AR1 ActiveIntronRegion 0 46.77 28.40 32.24 29.22 26.54 3.78 44.72 33.75 20.08 22.12 4.05 21.06 25.06 1.98 15.57 19.69 19.51 10.59 16.15 22.42 6.31 4.16 8.92 23 ER7a ExonRegion 0 43.41 83.62 117.24 158.45 114.29 234.66 179.71 147.76 193.36 216.80 293.01 241.10 218.89 334.85 114.05 187.03 228.66 154.48 115.70 249.63 103.41 197.40 112.80 24 E7a_E8a KnownJunction 0 93.28 207.59 135.21 168.61 151.95 331.57 269.92 176.62 231.39 209.09 359.46 292.60 400.14 317.68 137.34 237.03 346.52 100.65 167.35 275.16 66.29 231.16 152.54 25 ER8a ExonRegion 0 66.46 193.87 124.82 185.92 133.39 342.34 297.85 184.94 224.71 207.04 359.74 420.97 406.39 274.86 138.15 192.99 277.72 124.63 110.74 264.82 72.83 226.62 142.04 26 E8a_E9a KnownJunction 0 99.65 222.72 152.69 217.89 169.44 406.13 408.28 194.90 219.85 206.60 296.55 487.51 448.67 297.72 165.65 185.17 272.74 130.41 148.62 315.11 87.79 307.51 128.98 27 ER9a ExonRegion 0 73.90 196.87 182.73 250.03 237.32 417.49 372.85 231.13 269.34 250.35 398.38 642.70 390.64 330.41 179.77 240.15 333.89 179.18 174.59 320.64 103.59 332.52 180.04 28 E9a_E10a KnownJunction 0 78.31 188.85 173.56 262.57 303.14 595.40 479.12 248.37 275.00 309.77 429.37 745.29 407.93 355.88 220.41 210.80 346.70 171.33 189.56 256.12 169.52 320.92 251.74 29 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 I9_AR2 ActiveIntronRegion 0 12.59 10.59 15.14 35.68 27.31 13.17 47.83 17.46 18.21 9.06 3.96 22.76 37.40 8.08 11.83 22.18 15.83 29.52 8.49 16.09 8.93 11.70 9.34 31 I9_AR3 ActiveIntronRegion 0 18.05 5.62 19.46 34.95 28.17 3.67 31.85 16.06 17.15 9.78 5.69 24.70 42.49 12.04 12.12 16.26 22.52 30.98 5.25 13.14 10.24 14.46 7.60 32 I9_AR4 ActiveIntronRegion 1 14.99 5.08 21.34 32.71 24.30 1.83 28.35 13.83 18.22 9.18 9.34 8.30 47.29 11.64 9.19 16.84 15.95 25.10 6.90 12.59 2.94 14.93 10.77 33 I9_SR2 SilentIntronRegion 0 10.16 2.98 18.30 29.07 21.76 0.00 27.27 14.40 15.32 14.15 11.08 5.77 30.33 9.20 8.51 8.72 15.18 16.63 12.10 8.09 0.59 8.06 10.77 34 I9_AR8 ActiveIntronRegion 0 25.12 11.62 40.54 29.47 34.70 15.72 48.02 27.18 23.47 11.27 7.22 35.16 31.84 13.29 10.24 26.79 10.16 7.28 14.00 19.65 3.88 10.53 8.39 35 I9_AR9 ActiveIntronRegion 0 15.46 16.43 11.70 12.81 12.41 19.22 17.61 17.05 11.58 5.19 4.57 15.11 8.32 11.03 8.59 22.06 4.40 7.35 14.80 8.07 1.53 6.58 2.27 36 I9_SR5 SilentIntronRegion 0 11.46 9.89 5.26 8.84 17.62 20.03 24.85 15.19 11.28 2.96 7.66 15.08 6.66 10.58 12.51 18.98 13.16 9.06 6.39 8.54 6.67 5.63 4.60 37 E10_Aa NovelBoundary 0 16.82 55.65 38.91 48.55 39.81 7.44 41.20 28.22 23.18 7.36 20.06 0.00 27.11 12.83 34.49 30.93 22.35 32.04 12.61 14.45 27.61 9.12 16.56 38 ER10a ExonRegion 0 71.47 172.06 166.71 259.29 243.16 393.69 405.13 203.93 270.91 267.73 385.40 724.64 359.52 263.94 160.66 205.03 313.48 206.28 126.62 263.46 138.94 250.15 154.54 39 E10_Da KnownBoundary 0 105.06 203.38 203.81 316.34 272.92 300.22 472.36 224.63 290.07 256.72 342.98 715.43 411.17 298.67 141.54 210.37 308.37 215.60 140.15 290.95 118.98 223.56 135.39 40 ER10b ExonRegion 0 112.32 236.46 191.92 301.31 309.04 436.78 475.22 254.61 287.55 301.16 457.19 617.87 355.92 410.87 189.82 254.73 366.03 202.70 207.92 333.25 181.01 301.10 195.17 41 E10_Db KnownBoundary 0 155.14 224.83 187.31 281.08 342.70 456.61 430.37 211.82 252.23 287.61 285.65 475.35 315.56 243.69 116.69 172.18 288.17 114.49 100.24 222.62 116.39 250.38 111.40 42 ER10c ExonRegion 0 281.76 316.43 317.08 385.02 391.61 489.61 474.58 281.16 243.52 265.70 210.71 416.15 399.25 303.77 204.24 171.71 168.07 118.08 138.98 191.57 74.84 224.08 111.68 43 E10_Dc NovelBoundary 0 27.26 48.28 16.88 63.23 3.74 14.71 29.01 23.33 27.89 25.92 4.58 0.00 14.61 9.77 4.45 3.67 17.58 5.31 8.47 22.05 0.00 9.06 16.22 44 E11_Aa NovelBoundary 1 12.97 29.21 69.60 29.10 4.16 14.71 16.52 20.91 24.36 33.68 118.29 6.30 33.28 255.99 134.62 178.84 109.77 65.45 21.18 39.56 68.94 72.56 84.51 45 ER11a ExonRegion 0 0.00 0.32 0.00 1.27 0.00 0.57 0.21 0.00 0.00 0.00 1.51 0.00 0.00 0.36 0.00 0.93 0.00 0.58 0.00 0.66 0.00 0.00 0.00 46 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER12a ExonRegion 0 0.58 1.67 0.00 0.00 0.73 2.02 0.73 0.00 0.00 1.28 0.00 0.00 0.00 0.00 1.36 0.00 1.83 0.75 0.87 1.17 0.60 0.00 0.00 48 E12_Da KnownBoundary 0 0.00 3.35 1.74 2.00 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 E12a_E12b KnownJunction 0 0.00 0.00 0.00 1.96 0.00 0.00 0.00 0.00 3.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.55 0.00 0.00 0.00 0.00 0.00 50 E12_Ab KnownBoundary 0 36.90 26.44 11.44 15.62 15.28 96.99 46.28 0.00 2.60 9.48 18.95 0.00 0.00 0.00 0.00 72.97 50.40 14.59 46.50 28.76 28.05 5.51 3.84 51 ER12b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER12c ExonRegion 0 0.00 0.00 0.00 0.00 0.43 0.87 0.07 0.00 0.00 0.01 0.00 0.00 0.00 0.29 1.06 0.00 0.70 0.59 0.00 0.91 0.47 0.00 0.00 53 E12b_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 ER13a ExonRegion 0 0.00 0.83 0.91 0.00 0.34 0.71 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER14a ExonRegion 0 0.00 0.95 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.78 0.00 0.00 0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 ER15a ExonRegion 0 0.00 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 ER16a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 ER17a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 E17a_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 ER18a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 E18a_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 Ix_AR2 ActiveIntronRegion 0 24.70 10.00 21.88 13.10 23.84 23.94 39.66 22.15 7.63 11.03 5.64 30.79 31.49 10.95 12.77 14.14 8.62 8.76 8.32 17.65 1.69 8.00 4.96 67 ER19a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.90 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 E19_Da KnownBoundary 0 15.93 11.12 10.85 6.36 11.04 5.51 12.45 1.81 0.00 0.00 2.53 11.10 0.00 0.00 0.00 7.26 0.00 2.45 3.95 5.43 2.35 0.00 0.00 69 ER19b ExonRegion 0 1.08 1.03 0.00 0.00 1.36 0.93 1.78 0.00 0.00 0.00 0.98 5.42 3.91 3.78 7.21 3.51 3.33 0.00 2.15 1.44 1.49 1.41 3.47