Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	C1D	Gene	0	64.15	34.75	48.10	48.12	55.47	79.35	55.36	57.18	47.72	55.43	74.36	94.51	74.03	59.52	80.76	54.38	51.56	14.12	26.62	28.66	15.68	101.52	28.23
2	470189	Transcript	0	2.48	0.67	0.67	3.99	2.51	3.44	2.60	1.48	2.93	1.11	0.47	1.00	0.58	0.22	0.00	0.24	0.00	0.72	2.09	4.00	0.36	0.34	0.24
3	410067	Transcript	1	734.69	173.76	48.22	58.48	258.26	445.66	282.82	27.95	51.08	58.29	238.63	12.26	18.59	155.78	310.76	278.02	269.89	44.45	99.06	71.12	102.46	234.95	129.48
4	409302	Transcript	0	161.29	51.50	16.00	10.32	49.83	103.52	90.86	14.42	21.93	16.39	62.04	0.00	2.92	27.40	35.48	57.42	39.41	26.92	38.92	41.67	18.97	45.22	22.79
5	485709	Transcript	1	17.59	5.05	8.85	6.55	11.45	20.45	17.99	11.55	6.77	12.34	3.38	13.02	19.40	8.34	12.24	4.53	3.15	2.20	1.20	2.40	0.46	20.39	4.55
6	355848	Transcript	0	1.70	3.77	2.17	2.40	4.67	2.51	4.56	1.20	2.91	1.84	0.71	1.97	2.05	1.31	0.78	0.18	0.66	0.27	0.45	1.55	0.21	1.65	0.56
7	407324	Transcript	0	3.43	3.06	4.18	2.55	3.46	9.61	7.98	2.81	8.51	6.20	5.96	5.31	1.51	3.46	4.53	5.39	12.25	6.23	4.30	1.67	4.98	4.07	1.57
8	479484	Transcript	0	2.70	2.11	5.17	4.53	7.40	14.56	8.16	10.56	4.05	2.94	5.85	3.16	5.57	3.46	3.98	1.87	6.33	2.00	3.77	1.54	0.93	9.93	6.82
9	ER1a	ExonRegion	0	1.69	1.33	1.35	6.15	5.03	6.88	5.20	2.95	4.06	2.23	0.95	2.00	1.16	0.44	0.00	0.49	0.00	1.43	4.17	8.01	0.72	0.68	0.48
10	E1_Da	NovelBoundary	0	3.78	0.00	3.49	1.63	27.93	16.41	16.16	0.00	3.18	2.04	0.00	0.00	0.00	0.00	0.00	4.10	0.00	0.00	0.00	11.57	2.53	0.00	0.00
11	E1a_E4a	KnownJunction	0	3.26	0.00	0.00	1.83	0.00	0.00	0.00	0.00	1.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E2_Ac	NovelBoundary	0	29.12	10.00	0.00	1.93	38.20	49.06	20.27	0.00	1.65	4.67	18.53	5.55	0.00	2.47	6.30	21.53	9.44	4.68	0.00	6.52	15.69	0.00	8.28
13	ER2a	ExonRegion	0	9.34	3.23	0.00	3.45	11.18	16.94	7.87	2.54	3.20	1.75	6.14	3.82	2.76	3.53	10.24	12.41	4.85	1.85	0.00	2.25	4.02	0.37	5.36
14	E2_Ae	NovelBoundary	0	28.60	13.42	1.83	0.00	8.06	25.38	20.23	0.00	0.00	3.01	20.90	0.00	0.00	7.77	6.30	16.83	18.33	6.38	7.72	0.00	9.45	18.37	8.62
15	ER2b	ExonRegion	1	56.30	18.03	0.41	6.54	42.46	93.40	52.25	4.72	8.89	4.82	43.43	4.33	5.00	50.02	57.25	55.28	25.31	10.47	5.52	13.62	25.12	18.75	22.32
16	ER2c	ExonRegion	1	283.42	77.09	6.57	14.25	135.25	330.75	200.52	12.57	15.61	11.99	195.05	9.05	12.36	154.00	202.03	182.92	148.84	27.04	58.21	64.80	70.72	68.95	74.22
17	E2_Da	NovelBoundary	1	255.67	55.58	7.42	4.23	96.77	194.66	151.92	8.91	5.99	4.43	127.35	0.00	12.34	53.21	132.52	132.36	86.11	13.27	22.97	45.25	25.08	72.32	44.05
18	E2a_E3b	KnownJunction	1	322.58	103.01	31.99	19.18	99.66	207.04	179.96	28.83	40.94	30.57	124.08	0.00	5.84	54.80	70.96	114.84	78.82	52.31	77.84	83.35	34.78	90.44	45.58
19	E2a_E4a	KnownJunction	1	1460.04	344.28	96.45	113.51	505.35	874.38	557.77	53.36	98.96	114.83	471.12	20.71	34.41	308.02	611.29	543.62	534.92	87.05	198.12	139.98	200.90	469.54	253.61
20	E2a_E4b	NovelJunction	0	21.71	0.00	2.81	3.76	0.00	7.84	14.62	2.46	0.00	0.00	6.84	0.00	0.00	4.83	15.20	7.95	0.00	5.43	4.33	0.00	3.03	0.00	8.71
21	ER2d	ExonRegion	1	594.74	150.48	14.70	20.44	259.55	509.80	329.67	19.01	24.70	26.38	320.86	12.99	28.14	238.75	382.97	318.02	280.58	42.50	108.30	104.25	103.57	235.44	126.28
22	ER2e	ExonRegion	1	1085.86	312.75	37.42	42.93	455.55	918.58	560.81	35.00	48.53	51.13	526.63	12.45	46.51	367.80	675.87	534.24	512.60	81.45	188.07	159.57	199.62	482.07	240.32
23	E2_Db	NovelBoundary	0	0.00	2.89	1.83	2.06	3.74	19.42	36.30	2.55	0.00	4.92	2.21	0.00	0.00	0.00	0.00	0.00	14.31	5.14	0.00	0.00	15.75	3.12	17.33
24	E2b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E2b_E3b	NovelJunction	1	114.17	43.02	15.43	13.55	94.40	153.55	72.43	28.88	24.31	16.52	64.54	0.00	7.47	37.55	14.22	46.14	112.67	56.17	62.21	41.93	20.45	72.38	25.10
26	E2b_E4a	KnownJunction	1	541.50	134.65	49.61	85.74	292.87	521.52	254.02	113.57	70.66	82.41	321.45	11.85	46.10	137.44	169.36	324.96	262.08	72.13	99.67	93.51	75.86	251.30	139.82
27	E2b_E4b	NovelJunction	0	10.30	9.27	3.19	7.52	15.79	10.33	11.79	0.00	0.00	6.53	9.95	0.00	0.00	4.59	0.00	21.11	4.77	0.00	0.00	0.00	0.00	11.51	3.76
28	ER2f	ExonRegion	1	378.37	109.19	7.45	13.00	189.98	379.17	189.53	10.64	8.74	15.97	257.97	8.66	42.93	138.18	223.62	245.09	199.83	20.18	69.59	76.60	59.50	193.13	102.78
29	E3_Aa	NovelBoundary	0	10.08	2.63	0.00	7.19	8.32	4.66	13.34	6.78	5.53	5.80	2.68	0.00	0.00	7.42	0.00	4.36	12.81	9.16	0.00	6.52	8.53	8.70	4.35
30	ER3a	ExonRegion	0	4.74	3.27	0.18	0.14	6.14	7.32	7.28	0.16	2.49	1.93	6.34	3.03	4.53	3.39	2.82	9.17	6.10	7.29	4.52	5.01	8.96	6.89	4.70
31	E3_Ab	KnownBoundary	0	3.19	6.71	0.00	0.00	8.32	2.56	7.55	0.00	1.77	5.96	2.32	6.30	6.82	4.59	14.96	4.36	0.00	10.20	3.67	5.50	5.93	2.51	4.35
32	ER3b	ExonRegion	0	75.89	32.03	24.73	16.62	29.61	51.01	48.71	19.76	33.90	28.07	38.79	8.15	9.32	20.88	21.87	38.60	42.35	38.24	19.99	29.37	20.04	28.59	17.89
33	E3a_E4a	KnownJunction	0	5.56	5.92	12.36	7.52	4.24	21.52	16.65	8.26	23.03	16.68	11.53	12.90	0.00	7.00	10.75	7.01	30.67	11.40	8.38	0.00	5.99	5.33	0.00
34	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	1.47	0.00	0.00	1.77	0.00	2.92	2.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.53	0.00	0.00	3.15	0.00	0.00
35	I3_AR2	ActiveIntronRegion	0	6.73	12.11	3.63	5.13	10.52	9.14	18.47	6.59	3.36	3.49	5.54	5.73	8.98	1.94	4.66	4.53	3.28	1.65	2.54	3.98	2.85	8.95	1.85
36	ER4a	ExonRegion	1	1102.71	303.00	31.12	43.88	467.72	917.27	540.97	24.89	47.18	56.66	525.36	34.64	105.06	302.74	607.52	532.01	601.42	63.93	183.48	107.23	212.00	520.46	234.93
37	ER4b	ExonRegion	1	653.06	165.26	37.83	41.39	241.10	443.06	277.44	28.75	48.53	58.13	265.32	27.80	86.03	91.68	203.24	238.79	371.00	38.75	105.28	44.06	131.93	292.35	120.79
38	E4_Da	KnownBoundary	1	275.01	27.36	33.20	21.98	49.58	64.17	30.60	30.44	57.87	58.51	137.98	16.21	27.27	12.01	21.88	20.25	101.73	18.65	20.42	35.92	43.74	21.25	23.65
39	ER4c	ExonRegion	1	147.20	69.98	128.46	100.36	42.17	73.16	60.49	114.93	141.22	144.92	492.78	98.08	49.06	113.75	117.11	114.46	337.20	77.41	58.38	93.11	124.93	148.13	54.67
40	E4_Db	NovelBoundary	0	0.00	3.35	18.92	5.39	8.49	5.00	7.91	9.41	1.48	5.96	4.42	18.16	6.17	4.94	0.00	0.00	4.39	0.00	0.00	3.00	0.00	5.14	13.06
41	E4b_E5b	KnownJunction	1	17.63	72.03	217.14	180.80	91.26	164.56	111.95	183.72	203.38	200.82	504.65	84.03	62.17	243.39	301.01	193.37	560.82	83.20	109.37	138.51	148.39	291.17	109.61
42	I4	Intron	0	2.12	2.41	3.83	5.37	11.23	10.04	16.43	6.11	3.02	2.49	3.17	7.37	6.70	2.41	2.72	0.81	3.01	2.11	3.49	1.55	2.61	10.64	3.75
43	I4_SR1	SilentIntronRegion	0	2.13	2.42	3.85	5.39	11.27	10.07	16.49	6.13	3.03	2.50	3.19	7.39	6.72	2.41	2.73	0.82	3.02	2.11	3.50	1.56	2.62	10.68	3.76
44	E5_Aa	NovelBoundary	1	9.78	0.00	0.00	7.13	16.55	17.89	11.92	11.42	7.26	1.21	2.68	0.00	33.11	4.65	6.30	0.00	4.77	2.07	4.05	5.75	2.90	6.25	0.00
45	ER5a	ExonRegion	0	2.70	2.11	5.17	4.53	7.40	14.56	8.16	10.56	4.05	2.94	5.85	3.16	5.57	3.46	3.98	1.87	6.33	2.00	3.77	1.54	0.93	9.93	6.82
46	E5_Ab	KnownBoundary	0	3.41	6.51	6.03	7.16	6.79	39.52	23.80	7.06	3.59	1.64	2.11	7.50	6.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	13.04	4.27
47	ER5b	ExonRegion	0	9.43	45.35	104.18	119.13	135.41	279.13	145.05	89.41	99.50	96.86	126.99	88.49	61.54	235.08	483.10	414.66	160.34	72.26	125.68	95.97	39.13	375.66	194.17
48	E5_Da	KnownBoundary	0	10.74	0.00	10.23	8.42	12.90	16.18	7.24	22.10	4.48	19.26	0.00	24.46	28.41	7.24	14.09	8.12	0.00	4.02	4.14	0.00	2.35	15.06	0.00
49	E5a_E5c	KnownJunction	0	3.11	85.45	107.24	102.28	279.12	320.33	163.40	88.68	82.09	85.58	106.71	97.38	126.94	128.97	172.69	293.00	86.30	67.49	51.86	68.33	30.95	119.04	124.12
50	ER5c	ExonRegion	1	17.59	5.05	8.85	6.55	11.45	20.45	17.99	11.55	6.77	12.34	3.38	13.02	19.40	8.34	12.24	4.53	3.15	2.20	1.20	2.40	0.46	20.39	4.55
51	E5_Ac	KnownBoundary	0	12.74	12.23	11.27	7.82	8.15	33.96	34.80	7.35	8.77	9.13	15.85	6.30	20.45	14.24	24.72	8.20	17.58	0.00	0.00	2.56	2.47	29.88	11.78
52	ER5d	ExonRegion	1	9.27	81.82	126.46	157.03	203.45	439.88	254.39	118.85	129.44	127.20	175.93	417.44	531.08	174.55	198.76	273.54	133.90	82.48	100.54	59.03	28.97	201.19	175.98
53	E5b_E6a	KnownJunction	1	27.56	95.71	182.10	218.19	295.84	695.57	515.86	170.42	169.27	170.87	186.52	876.44	558.73	278.24	445.76	599.33	162.13	92.48	291.58	80.02	55.29	584.17	364.93
54	E6_Aa	NovelBoundary	0	2.82	0.00	8.99	5.76	4.24	2.33	9.58	17.17	10.07	3.04	2.53	12.60	0.00	5.24	9.02	0.00	0.00	0.00	3.86	3.26	3.15	2.69	3.24
55	ER6a	ExonRegion	0	500.58	163.40	123.23	141.11	177.41	328.76	216.54	149.12	160.69	198.36	444.32	379.20	281.53	278.55	223.81	296.06	280.10	63.82	177.68	69.43	63.34	425.21	169.12
56	E6_Da	KnownBoundary	1	36.82	59.86	34.18	2.90	35.31	54.80	36.96	22.39	2.58	12.01	15.58	74.57	75.16	37.97	28.18	39.82	12.16	2.07	4.33	2.49	7.48	58.91	0.00
57	ER6b	ExonRegion	1	40.16	96.01	112.90	64.32	155.56	180.40	142.48	161.64	55.73	89.40	47.70	150.98	126.75	143.43	136.85	50.40	27.69	8.06	29.21	54.13	13.15	265.07	21.35
58	E6_Db	KnownBoundary	1	67.12	87.42	126.52	70.65	294.65	286.14	256.01	245.46	90.94	126.22	90.44	159.65	210.86	210.14	127.33	76.82	46.56	0.00	43.39	82.58	28.48	395.38	19.04
59	ER6c	ExonRegion	1	35.87	99.65	132.01	108.66	201.19	197.60	166.21	235.16	117.30	165.84	74.44	209.92	170.87	155.78	132.44	58.08	28.19	7.64	34.18	78.90	16.20	335.84	12.94
60	E6_Dc	KnownBoundary	1	23.49	129.45	72.00	84.34	118.00	113.29	98.09	113.53	66.12	108.60	31.06	157.40	144.31	105.54	124.36	35.89	8.60	6.63	21.18	47.87	8.77	214.13	11.95
61	E6_Dd	KnownBoundary	1	29.12	84.39	161.91	137.25	205.26	119.08	131.91	229.07	130.44	161.47	66.91	379.62	273.36	168.76	242.29	28.88	47.69	11.19	34.45	107.57	2.35	270.16	15.71
62	ER6d	ExonRegion	1	25.40	124.34	169.39	155.50	191.89	133.87	126.91	262.89	146.39	199.18	66.27	300.79	238.97	152.82	192.73	37.51	30.18	14.61	33.22	97.16	5.98	295.26	15.52
63	ER6e	ExonRegion	1	32.46	62.79	189.52	191.27	137.64	122.89	95.02	227.60	174.18	203.65	110.73	386.34	271.14	141.66	265.65	63.25	52.25	15.26	29.54	84.83	13.12	281.60	27.74
64	E6_De	KnownBoundary	0	14.52	11.12	15.91	4.56	6.71	4.54	16.16	6.57	8.28	5.35	6.21	16.96	12.17	7.06	9.77	6.41	0.00	3.19	0.00	0.00	0.00	15.92	0.00
65	ER6f	ExonRegion	0	1.70	3.77	2.17	2.40	4.67	2.51	4.56	1.20	2.91	1.84	0.71	1.97	2.05	1.31	0.78	0.18	0.66	0.27	0.45	1.55	0.21	1.65	0.56