Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BOLA3 Gene 0 13.24 7.86 33.39 14.96 14.30 18.59 14.96 15.98 13.47 16.22 35.21 24.96 13.85 41.33 65.94 56.56 40.53 13.11 29.81 18.00 17.29 16.11 20.41 2 469676 Transcript 0 0.00 0.00 0.00 0.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 484655 Transcript 0 6.39 4.75 4.46 3.11 5.95 6.51 8.86 5.69 4.16 3.12 2.24 6.28 6.51 5.65 11.01 6.44 3.60 7.66 7.99 9.57 3.65 3.76 6.45 4 327428 Transcript 0 0.00 0.00 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 295326 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 477685 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ER1a ExonRegion 0 6.88 0.76 5.97 0.00 2.68 2.29 6.45 1.51 1.24 1.15 7.01 0.00 1.17 34.72 24.30 13.37 8.66 2.08 12.74 2.93 8.81 6.51 8.08 8 ER1b ExonRegion 1 138.93 52.05 94.82 43.64 111.11 163.64 105.43 19.28 20.76 46.74 202.70 4.84 10.11 233.80 408.08 577.09 271.85 29.72 249.75 69.30 118.11 91.23 195.53 9 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 4.06 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.55 0.00 0.00 0.00 0.00 0.00 10 E1a_E1c KnownJunction 0 0.00 0.00 0.00 1.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1a_E1e KnownJunction 0 19.86 20.33 121.34 65.06 11.54 42.08 24.55 37.17 39.03 71.08 7.48 0.00 12.50 61.92 114.22 115.35 53.02 57.74 53.37 30.55 25.08 17.94 22.62 12 ER1c ExonRegion 0 0.91 0.34 4.38 2.21 0.46 0.88 1.99 4.60 2.04 2.17 1.40 2.00 0.00 0.58 1.43 0.59 0.57 5.69 2.34 4.42 0.50 0.36 1.76 13 E1_Ac KnownBoundary 0 0.00 0.00 2.69 5.19 0.00 2.90 3.84 15.32 5.73 2.90 2.68 6.30 0.00 2.47 0.00 3.67 0.00 10.24 8.09 22.37 3.15 0.00 0.00 14 ER1d ExonRegion 0 0.92 2.78 5.27 4.32 1.32 4.25 4.30 9.89 8.61 3.28 3.37 4.14 0.93 1.12 2.11 2.04 0.88 7.54 4.00 5.91 0.79 0.17 0.51 15 E1_Db KnownBoundary 1 30.08 32.95 32.17 36.19 55.18 39.75 38.20 22.39 42.56 32.88 5.32 36.91 46.10 21.19 19.78 15.72 25.15 49.58 12.52 51.20 10.56 20.08 27.06 16 E1b_E1e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER1e ExonRegion 0 11.86 9.15 4.55 4.01 11.43 12.14 15.73 6.77 6.27 4.06 3.09 10.56 13.02 10.72 20.58 12.29 6.62 9.62 13.64 14.72 6.81 7.15 11.15 18 E1_Ad KnownBoundary 0 0.00 0.00 1.83 3.46 0.00 11.47 8.48 3.94 3.59 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.86 3.26 0.00 0.00 0.00 19 ER1f ExonRegion 0 2.35 1.67 1.94 1.78 0.03 6.35 2.02 4.61 2.36 0.76 0.68 1.03 1.58 1.05 1.63 0.70 1.09 1.67 3.23 2.04 0.69 0.09 0.17 20 E1_Ae KnownBoundary 0 0.00 0.00 6.00 2.93 4.16 0.00 1.99 1.93 2.69 1.40 0.00 0.00 6.66 2.12 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 21 ER1g ExonRegion 0 14.31 12.34 150.29 43.89 9.81 13.85 20.32 55.86 51.07 67.06 241.53 98.59 39.95 161.61 211.00 100.32 289.35 27.89 59.68 52.41 117.96 43.99 24.21 22 E1_Dc NovelBoundary 0 0.00 0.00 6.86 6.49 0.00 4.32 4.37 0.00 1.77 3.33 13.32 0.00 0.00 2.30 5.07 0.00 0.00 2.11 0.00 10.42 0.00 0.00 4.27 23 E1c_E2a KnownJunction 1 6.82 12.30 242.16 59.20 7.39 24.59 30.03 83.01 62.99 80.67 411.47 90.63 44.96 457.00 484.83 178.24 478.91 38.59 86.50 93.26 158.58 65.34 54.29 24 E1c_E3a KnownJunction 1 7.48 0.00 113.92 70.59 0.00 2.73 4.06 52.29 34.00 48.08 134.82 28.21 26.62 120.78 193.71 86.47 90.14 34.99 49.70 55.67 43.80 25.84 23.99 25 E2_Aa NovelBoundary 0 12.97 17.96 3.93 0.00 8.57 0.00 17.97 0.00 2.78 2.53 7.11 11.10 8.28 11.65 9.64 7.52 4.77 2.53 0.00 5.94 0.00 0.00 0.00 26 ER2a ExonRegion 0 4.45 12.27 199.27 68.63 42.09 30.93 25.07 66.28 59.59 82.09 216.88 85.03 53.22 311.58 427.17 389.58 243.30 70.26 131.35 71.17 91.44 81.16 91.83 27 E2_Da NovelBoundary 0 3.70 0.00 14.37 5.06 0.00 5.00 8.74 2.46 0.00 5.48 5.00 0.00 0.00 4.89 5.56 7.78 0.00 7.92 0.00 15.21 3.15 0.00 7.26 28 E2a_E3a KnownJunction 0 0.00 14.08 177.08 63.56 65.20 48.21 12.01 46.25 46.32 77.71 185.84 97.68 74.18 126.67 158.48 124.41 166.62 30.55 56.28 42.06 43.86 48.01 18.87 29 ER3a ExonRegion 0 64.55 29.61 197.46 91.41 80.79 98.64 61.41 69.01 56.26 95.50 154.70 179.55 86.75 209.64 357.79 277.08 166.48 41.60 147.71 71.69 62.78 97.97 104.76 30 ER3b ExonRegion 1 39.91 5.23 3.41 2.14 3.06 3.67 12.20 0.00 1.24 1.47 1.66 33.71 32.83 19.72 33.57 3.40 9.20 0.00 0.00 1.67 2.05 0.74 0.00 31 ER3c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00