Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ETAA1 Gene 0 51.12 66.08 54.63 53.75 95.91 81.75 104.73 59.47 40.77 57.44 58.76 121.81 105.85 53.44 45.16 40.05 51.43 24.78 21.06 61.97 13.08 68.37 26.04 2 272342 Transcript 0 44.64 58.81 42.20 42.90 72.43 82.86 91.01 40.39 37.26 53.59 69.47 98.02 88.20 60.66 38.91 45.94 64.03 30.41 20.20 55.19 18.50 65.43 29.00 3 462772 Transcript 0 12.34 8.44 2.99 12.03 13.79 11.00 12.18 8.17 6.89 2.82 6.68 7.69 16.19 5.94 0.99 1.23 3.28 2.77 0.23 5.73 3.97 4.48 1.49 4 ER1a ExonRegion 0 5.23 12.33 9.55 5.32 6.44 29.06 16.18 7.27 9.72 17.47 24.43 7.76 7.80 25.82 14.37 33.42 33.80 37.47 16.22 32.96 21.39 17.45 23.54 5 E1_Da NovelBoundary 0 9.85 6.25 11.77 2.90 3.65 8.12 18.24 12.82 8.45 11.17 14.42 5.40 6.82 10.71 0.00 12.30 21.13 34.57 4.80 14.25 11.74 7.84 19.21 6 E1a_E2a KnownJunction 0 14.08 28.81 12.68 21.18 35.48 182.39 95.44 21.19 17.74 26.46 67.75 25.21 19.80 72.34 28.68 53.83 65.26 36.98 8.47 52.73 26.44 25.23 23.56 7 I1 Intron 0 7.12 6.31 8.46 7.46 10.99 13.38 20.66 12.27 9.33 9.49 11.49 18.98 13.00 14.70 5.62 14.55 13.27 14.58 5.43 15.90 11.94 15.75 12.07 8 I1_AR1 ActiveIntronRegion 0 6.07 8.56 10.65 8.32 10.30 11.70 17.36 15.60 12.69 11.61 16.34 15.58 11.23 17.77 7.88 20.48 15.07 23.77 7.92 19.39 20.18 17.63 16.46 9 I1_SR1 SilentIntronRegion 0 8.47 0.00 12.87 4.54 6.24 4.28 4.85 18.15 11.73 5.73 6.12 5.77 31.27 10.02 11.61 8.92 9.90 8.62 0.00 12.77 2.20 10.42 5.87 10 I1_AR2 ActiveIntronRegion 0 7.06 0.90 14.57 5.45 2.68 3.67 5.88 19.21 10.84 5.35 3.44 7.22 26.06 16.60 7.09 13.87 9.17 5.34 2.12 13.71 1.96 11.81 5.87 11 I1_SR2 SilentIntronRegion 0 10.13 2.34 7.42 5.45 5.32 2.98 8.55 10.13 3.47 6.22 9.23 23.68 18.98 16.34 6.76 21.05 6.83 2.41 11.24 12.64 2.64 12.45 10.30 12 I1_SR3 SilentIntronRegion 0 1.88 5.28 4.49 6.50 12.24 12.52 23.77 9.77 5.87 6.47 3.42 15.52 11.75 12.35 2.37 10.17 10.18 10.04 0.35 11.95 6.10 12.44 11.55 13 I1_AR4 ActiveIntronRegion 0 10.31 4.69 7.11 7.24 13.09 19.07 27.56 8.85 7.33 8.72 8.92 24.95 14.18 11.02 3.44 6.59 13.76 6.50 2.93 13.55 5.22 15.54 6.67 14 E2_Aa NovelBoundary 0 3.63 9.34 12.06 14.78 36.76 41.23 59.53 19.63 9.26 6.02 19.64 38.26 33.93 26.31 8.90 12.99 18.05 5.55 4.80 17.83 2.35 21.92 12.63 15 ER2a ExonRegion 0 30.94 47.72 30.93 29.87 37.02 73.42 76.91 30.05 33.22 39.32 79.22 55.58 69.62 62.67 25.26 45.57 73.95 38.23 18.20 64.39 21.64 52.75 32.51 16 E2a_E3a KnownJunction 0 69.35 49.79 43.88 39.86 40.07 91.20 63.11 21.19 45.63 50.63 85.07 103.38 156.81 106.19 35.60 58.87 89.48 53.60 26.54 58.93 17.79 84.87 38.16 17 ER3a ExonRegion 1 42.36 65.63 31.92 43.03 38.29 52.32 61.66 26.26 41.71 61.26 107.31 139.22 96.18 81.23 28.79 48.79 88.44 30.55 23.00 69.05 23.27 81.83 53.05 18 E3_Da NovelBoundary 0 0.00 3.35 1.63 4.73 27.08 5.79 32.15 17.37 20.34 9.43 0.00 18.76 27.76 3.00 0.00 8.03 0.00 3.81 0.00 6.46 0.00 7.72 0.00 19 E3a_E4b KnownJunction 0 44.60 75.05 23.00 49.24 75.13 35.21 75.92 37.99 49.65 52.62 91.71 135.79 70.45 66.10 28.93 39.65 81.44 22.14 28.33 48.90 19.95 60.13 30.82 20 I3 Intron 0 2.50 5.56 3.19 3.23 9.71 13.80 17.08 9.15 9.93 6.20 4.54 24.64 22.62 8.08 1.83 5.65 5.31 2.74 1.42 12.71 0.68 9.66 2.91 21 I3_SR1 SilentIntronRegion 0 2.51 5.56 3.19 3.23 9.71 13.81 17.08 9.15 9.94 6.20 4.54 24.65 22.63 8.08 1.83 5.65 5.32 2.74 1.42 12.72 0.68 9.66 2.91 22 ER4a ExonRegion 0 14.23 16.89 5.98 6.28 23.50 22.01 14.56 11.77 6.84 5.63 8.57 15.37 25.56 6.87 1.98 2.46 6.55 5.54 0.46 8.20 0.29 8.97 2.98 23 E4_Ab KnownBoundary 0 22.15 17.50 11.03 12.15 34.04 45.31 28.44 24.27 14.41 11.36 8.95 12.30 26.78 9.12 0.00 11.36 12.16 12.02 0.00 17.32 0.00 7.72 0.00 24 ER4b ExonRegion 0 45.15 81.18 42.64 46.82 90.12 72.30 96.07 54.75 45.19 59.90 84.27 179.25 146.10 68.74 35.77 47.08 89.60 32.22 27.10 70.86 27.35 78.13 33.90 25 E4a_E5a KnownJunction 0 50.60 65.84 42.52 34.86 63.41 42.82 127.63 46.09 37.27 65.81 92.71 123.19 192.68 55.98 46.97 74.51 58.06 28.64 33.22 73.19 31.14 126.57 23.73 26 E4a_E5b KnownJunction 0 10.45 0.00 0.00 17.78 4.07 0.00 9.80 4.56 6.94 0.00 4.79 0.00 6.82 5.00 0.00 0.00 0.00 0.00 0.00 3.26 7.66 0.00 0.00 27 ER5a ExonRegion 0 49.43 68.73 55.64 55.92 112.31 90.00 125.54 65.89 45.63 63.11 73.75 157.69 157.30 66.87 50.40 48.79 63.41 26.35 24.52 76.00 12.39 88.28 29.75 28 E5_Ab KnownBoundary 1 94.31 91.10 71.73 46.31 129.20 47.64 80.24 67.53 38.05 75.72 36.22 117.64 106.32 32.20 41.54 3.67 44.88 8.79 8.94 47.81 5.62 81.62 24.67 29 ER5b ExonRegion 0 115.58 112.51 90.63 80.04 140.60 113.48 150.59 79.65 45.47 59.84 54.98 153.31 86.46 57.02 74.87 37.72 45.52 18.31 20.47 56.14 14.51 63.68 29.88 30 E5_Da NovelBoundary 0 0.00 15.26 1.69 14.62 15.62 5.39 40.59 4.76 4.77 7.84 5.05 0.00 13.47 12.07 0.00 4.27 4.77 2.11 13.46 14.38 0.00 8.51 12.63 31 E5a_E6a KnownJunction 0 82.53 103.93 99.23 76.58 212.22 147.64 174.05 72.17 45.72 88.21 43.85 151.40 74.18 42.91 85.91 34.78 66.39 16.00 7.53 30.74 5.44 67.36 23.30 32 I5 Intron 0 9.99 10.10 11.12 23.84 24.09 22.37 29.22 12.64 8.27 11.53 4.48 14.02 18.32 6.98 4.73 4.25 2.53 1.95 2.70 10.75 1.51 14.75 5.54 33 I5_SR1 SilentIntronRegion 0 9.61 9.72 11.29 24.38 23.08 22.25 29.60 12.37 8.53 11.66 4.56 14.24 19.08 7.11 4.69 4.14 2.63 2.03 2.63 10.90 1.55 15.14 5.81 34 I5_AR1 ActiveIntronRegion 0 13.92 14.04 9.50 18.65 34.42 23.68 25.72 15.48 5.75 10.35 3.76 12.00 10.89 5.72 5.15 5.36 1.51 1.13 3.41 9.36 1.07 11.00 2.88 35 E6_Aa NovelBoundary 0 29.78 12.96 36.22 44.85 78.10 38.61 70.62 32.33 15.39 27.08 4.26 13.95 6.01 12.36 5.07 4.19 0.00 2.36 0.00 2.43 0.00 20.70 8.54 36 ER6a ExonRegion 0 57.26 70.31 72.66 73.16 103.88 84.51 93.66 75.80 46.28 70.95 28.91 81.03 37.20 26.54 44.19 21.23 20.02 14.16 15.96 44.98 5.55 49.86 11.55 37 IG18_AR1 ActiveIntergenicRegion 0 0.00 10.00 3.68 5.00 22.07 16.81 7.28 2.45 3.71 2.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.65 1.77 0.00 2.60 0.00 38 IG18_SR1 SilentIntergenicRegion 0 3.62 21.47 19.06 38.53 44.90 40.70 33.40 19.20 15.44 27.84 2.65 0.00 1.32 2.03 0.00 1.02 1.13 3.79 4.15 15.14 0.00 4.78 0.00 39 IG18_SR2 SilentIntergenicRegion 0 7.50 18.30 10.45 22.48 24.16 22.76 24.84 10.99 8.04 13.54 0.36 2.20 1.75 0.54 2.44 1.01 1.12 2.45 3.96 10.05 0.00 5.52 0.88