Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CNRIP1 Gene 0 90.51 206.94 241.12 240.14 102.04 255.41 120.30 115.63 95.74 127.00 0.19 0.20 0.28 0.56 0.52 0.26 0.62 139.13 87.18 136.01 67.74 82.66 43.73 2 481714 Transcript 0 0.28 1.41 5.86 0.59 0.00 0.00 2.77 3.55 3.01 4.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 2.21 1.68 0.00 2.82 4.47 3 263655 Transcript 0 151.02 187.31 92.62 91.10 91.68 140.51 90.65 30.66 28.96 33.79 0.00 0.00 1.76 0.61 0.00 0.00 0.00 39.93 33.29 52.17 30.12 23.56 23.64 4 409862 Transcript 0 7.85 13.94 32.54 25.84 9.02 10.68 27.17 18.49 11.26 15.07 0.16 0.07 0.16 0.22 0.39 0.06 0.14 14.62 13.08 31.71 4.22 9.13 4.51 5 409559 Transcript 0 1.89 3.23 2.34 1.66 6.64 16.72 3.61 5.84 7.72 3.67 0.00 0.00 0.00 0.00 0.17 0.00 0.27 0.22 12.50 4.32 7.49 7.53 2.42 6 ER1a ExonRegion 0 0.55 0.00 1.20 1.19 0.00 0.00 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.93 0.00 0.00 1.09 7 E1_Ab KnownBoundary 0 3.11 0.00 1.83 2.06 0.00 0.00 1.81 0.00 0.00 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.33 0.00 0.00 3.93 8 ER1b ExonRegion 0 14.99 6.87 14.09 10.96 4.14 31.70 9.71 12.16 8.91 12.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.91 11.40 17.99 5.54 15.90 13.33 9 E1_Ac KnownBoundary 0 38.30 34.27 47.25 23.61 15.03 179.61 40.01 23.91 25.84 38.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.82 14.40 94.85 8.96 28.53 45.75 10 ER1c ExonRegion 0 9.29 9.97 26.75 20.66 6.40 87.86 12.61 17.54 18.67 26.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38.85 15.15 40.83 14.72 15.89 16.45 11 E1_Da KnownBoundary 0 3.04 8.68 22.09 24.67 0.00 50.94 1.85 11.79 14.21 24.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.90 41.04 33.24 23.85 23.39 21.08 12 E1a_E1d KnownJunction 0 3.63 0.00 13.51 6.83 0.00 0.00 2.25 6.65 7.12 2.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.12 0.00 11.06 2.47 5.88 0.00 13 E1a_E1f KnownJunction 0 0.00 2.83 10.53 0.00 0.00 0.00 4.33 7.11 6.02 8.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 4.42 2.43 0.00 5.63 7.85 14 ER1d ExonRegion 0 6.90 12.98 23.41 15.95 5.37 60.99 13.73 13.36 15.11 24.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54.39 22.51 36.89 35.84 22.78 30.81 15 E1_Ad KnownBoundary 0 24.23 27.23 37.55 25.24 22.41 75.98 25.26 16.18 19.13 23.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49.04 26.92 37.33 26.93 10.96 30.56 16 ER1e ExonRegion 0 37.26 48.50 60.06 24.06 36.77 257.48 41.20 18.57 20.77 39.95 0.00 0.00 0.00 0.00 0.00 0.00 1.30 54.87 39.33 68.76 47.61 32.70 36.17 17 E1_Ae KnownBoundary 0 90.16 127.61 151.74 77.11 127.33 687.16 150.06 55.74 56.94 89.42 0.00 0.00 0.00 0.00 0.00 0.00 4.77 192.84 89.88 143.17 71.35 57.80 78.19 18 ER1f ExonRegion 0 88.22 116.83 158.76 114.24 110.73 549.62 129.46 79.62 68.14 113.79 0.00 0.00 0.00 1.06 0.00 0.00 1.06 245.96 95.89 161.65 94.45 57.38 60.50 19 E1_Af KnownBoundary 0 56.82 55.85 202.65 142.57 17.06 283.08 72.82 106.50 96.06 108.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 274.92 48.28 137.04 77.22 48.62 48.57 20 ER1g ExonRegion 0 101.59 113.82 248.14 160.74 41.34 201.46 64.57 121.34 115.14 162.72 0.00 0.00 0.00 0.00 0.00 0.00 1.68 246.93 120.50 192.13 148.53 106.03 69.36 21 E1b_E2a KnownJunction 0 207.52 227.59 336.39 257.44 50.17 266.38 110.94 182.70 151.62 225.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 278.03 153.23 288.97 219.37 146.35 107.64 22 I1 Intron 0 7.21 22.56 19.97 15.54 9.55 13.27 21.76 14.66 9.11 16.21 0.00 0.11 0.25 0.32 0.00 0.57 0.42 28.10 12.09 34.14 5.60 5.90 6.33 23 I1_AR2 ActiveIntronRegion 0 2.70 11.05 15.71 10.22 2.68 11.16 12.03 9.22 7.28 12.72 0.00 0.00 0.00 0.14 0.00 0.00 1.37 30.36 6.67 27.15 6.86 2.80 6.37 24 I1_SR2 SilentIntronRegion 0 5.83 26.71 22.10 16.72 12.31 12.28 19.05 20.50 13.93 22.44 0.00 0.00 0.00 0.61 0.00 0.51 0.56 39.77 9.12 42.63 9.52 5.62 9.19 25 I1_AR3 ActiveIntronRegion 0 9.43 35.24 27.67 23.82 12.77 17.43 32.37 22.46 13.09 23.26 0.00 0.34 0.73 0.25 0.00 0.67 0.00 26.80 17.44 43.50 4.34 7.65 5.07 26 I1_SR3 SilentIntronRegion 0 14.01 24.19 15.66 14.03 17.09 14.69 28.23 9.43 5.32 9.88 0.00 0.00 0.00 0.73 0.00 1.61 0.00 25.91 17.34 32.74 3.92 9.50 7.97 27 E2_Aa NovelBoundary 0 41.12 40.78 23.54 25.60 16.98 25.21 42.88 19.14 12.99 29.31 0.00 0.00 0.00 0.00 6.30 0.00 0.00 31.13 21.46 32.41 5.37 7.96 14.94 28 ER2a ExonRegion 0 182.31 383.00 436.31 370.46 190.79 633.75 210.29 248.49 213.90 289.28 0.65 0.00 0.00 1.45 0.48 1.00 2.23 468.13 201.12 337.66 234.94 168.31 122.15 29 E2_Da KnownBoundary 0 6.52 69.46 41.36 52.21 12.31 12.49 37.45 29.08 5.96 21.19 0.00 0.00 0.00 0.00 6.30 0.00 0.00 40.62 20.61 82.01 5.62 2.82 11.01 30 E2a_E3a KnownJunction 0 107.28 555.03 453.53 431.51 255.60 1104.48 360.19 263.45 226.99 320.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 342.94 152.19 325.72 212.76 188.78 93.30 31 E2a_E4a KnownJunction 0 0.00 5.33 1.15 0.00 3.23 26.75 4.20 6.28 10.94 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.13 6.01 11.37 7.72 3.76 32 ER2b ExonRegion 0 12.08 27.87 51.57 44.85 18.04 21.37 52.09 30.32 15.40 27.69 0.32 0.15 0.32 0.44 0.78 0.12 0.27 20.12 26.16 52.35 5.97 12.38 9.03 33 E2_Db NovelBoundary 0 13.93 42.69 62.86 36.46 35.14 13.69 69.91 24.32 21.67 26.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.49 8.19 57.72 2.72 12.98 16.05 34 I2_AR7 ActiveIntronRegion 0 2.29 11.14 18.49 36.60 20.44 18.85 30.65 31.64 11.94 20.86 0.00 0.00 0.00 0.00 0.46 2.02 0.00 2.64 5.39 20.48 0.12 10.64 1.10 35 I2_AR8 ActiveIntronRegion 0 9.62 8.07 25.92 71.04 18.16 29.40 30.09 34.67 12.39 26.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.38 1.16 14.18 2.20 14.96 4.45 36 I2_AR9 ActiveIntronRegion 0 5.93 9.69 17.08 49.22 14.77 14.86 21.88 21.55 9.69 16.38 0.00 1.65 0.00 0.00 0.47 0.69 0.00 2.87 2.21 25.17 0.30 7.73 2.80 37 I2_AR13 ActiveIntronRegion 0 4.76 30.00 9.80 23.17 15.83 19.71 32.11 10.37 4.94 4.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 0.00 20.04 0.00 0.52 5.87 38 I2_AR14 ActiveIntronRegion 0 9.88 29.91 8.88 35.92 11.16 4.44 19.07 23.77 18.41 27.46 0.99 0.00 0.00 0.00 0.00 0.00 0.23 9.40 6.12 25.30 0.84 1.14 0.80 39 I2_AR16 ActiveIntronRegion 0 19.79 42.60 14.71 28.06 22.00 23.73 19.06 17.42 14.29 20.33 0.16 0.45 0.36 0.25 0.17 0.99 0.14 16.37 8.51 14.92 3.31 2.43 3.06 40 E3_Aa NovelBoundary 0 76.46 67.62 40.45 41.35 36.84 35.32 39.83 22.51 12.47 25.22 0.00 0.00 0.00 0.00 0.00 4.36 3.74 26.99 8.94 28.57 0.00 7.65 0.00 41 ER3a ExonRegion 0 246.07 615.71 689.45 723.29 291.08 683.79 306.14 316.06 269.01 342.57 0.21 0.57 0.41 1.13 0.74 0.63 1.05 340.10 218.07 320.22 162.63 229.94 101.25 42 E3_Da KnownBoundary 0 169.07 375.85 389.49 431.95 139.81 179.33 137.66 120.18 99.04 130.87 0.00 0.00 13.31 0.00 0.00 0.00 0.00 40.46 79.72 69.80 39.04 45.80 22.19 43 ER3b ExonRegion 0 295.14 361.65 161.84 166.25 177.98 220.02 167.58 47.96 42.81 43.52 0.00 0.00 3.52 1.22 0.00 0.00 0.00 25.47 44.08 67.44 24.40 24.33 16.47 44 ER4a ExonRegion 0 3.78 1.13 3.52 3.32 10.06 6.69 3.03 5.40 4.50 4.59 0.00 0.00 0.00 0.00 0.33 0.00 0.54 0.45 7.87 2.63 3.62 7.35 1.08