Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	AFTPH	Gene	0	153.50	123.06	90.56	113.96	132.47	152.74	119.69	78.98	69.90	102.44	196.04	339.05	288.70	231.91	150.63	205.15	218.05	49.58	43.66	65.15	30.51	65.11	40.67
2	422803	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	238855	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	238856	Transcript	0	190.72	62.13	50.89	32.61	58.97	53.75	33.45	20.35	27.87	44.14	122.62	104.72	171.84	178.64	156.48	115.86	123.16	21.84	18.92	28.23	35.71	42.58	24.41
5	498706	Transcript	1	9.60	17.03	17.03	26.22	24.47	34.35	41.77	15.46	18.38	18.01	19.80	75.49	66.47	35.11	7.68	34.18	35.89	9.63	5.12	21.34	4.44	8.45	8.50
6	409933	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	409183	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	487769	Transcript	0	40.27	3.32	9.80	10.77	3.65	5.68	9.96	11.71	6.79	3.98	10.74	6.30	6.98	29.52	18.17	39.01	19.92	5.78	0.00	6.01	4.45	22.17	3.71
9	IG36_AR6	ActiveIntergenicRegion	0	18.05	2.28	3.39	1.89	10.81	5.36	6.65	4.88	6.09	3.07	42.32	128.82	147.05	89.90	133.52	133.89	62.41	0.63	0.61	3.19	2.56	4.84	2.72
10	IG36_SR7	SilentIntergenicRegion	0	1.83	0.00	0.00	0.00	0.00	1.18	0.00	0.55	1.48	1.19	11.09	9.63	8.65	51.96	53.33	59.74	26.14	0.00	0.00	2.03	0.29	0.00	0.00
11	IG36_AR7	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	3.67	0.00	0.00	0.69	0.00	0.00	1.04	0.00	14.16	14.51	6.06	4.09	0.00	0.00	0.00	0.00	0.00	0.00
12	ER1a	ExonRegion	1	19.19	17.37	10.28	4.87	10.96	38.04	20.55	7.90	17.35	16.56	83.28	18.57	37.57	103.57	62.28	139.24	130.91	23.37	19.35	18.77	26.09	12.03	30.23
13	E1_Ab	KnownBoundary	0	23.04	0.00	10.05	7.56	3.48	36.63	7.46	8.26	20.31	14.75	93.02	62.72	25.65	98.42	83.07	55.11	116.78	24.75	8.28	24.10	27.12	10.65	3.76
14	ER1b	ExonRegion	0	8.69	7.75	14.50	10.12	5.92	14.80	10.90	10.15	26.61	22.92	119.95	52.26	80.12	181.75	70.14	145.60	243.02	30.85	26.01	30.89	38.27	21.28	37.31
15	E1a_E2a	KnownJunction	1	32.23	27.43	34.09	26.30	11.38	35.38	31.93	30.44	53.91	47.57	136.93	48.32	54.87	296.72	72.93	385.20	222.25	114.58	60.61	29.08	23.35	49.05	92.19
16	I1_AR1	ActiveIntronRegion	0	2.95	0.25	1.81	0.87	3.13	2.47	3.10	1.01	2.53	1.30	24.47	11.32	12.19	48.78	47.75	69.80	49.53	2.02	1.82	3.38	3.77	2.42	4.77
17	I1_AR2	ActiveIntronRegion	1	2.68	2.94	6.84	8.38	3.14	2.04	13.88	4.25	2.15	3.16	5.29	42.80	58.90	3.09	7.66	5.69	9.96	0.00	2.38	6.87	0.61	1.56	0.94
18	I1_AR8	ActiveIntronRegion	0	36.91	9.91	21.04	22.18	19.69	4.03	10.02	12.89	3.00	5.12	1.74	20.12	16.75	0.60	11.92	10.50	5.87	1.44	1.96	2.86	0.78	0.33	4.66
19	ER2a	ExonRegion	1	20.01	37.34	42.22	31.02	18.49	34.84	39.68	31.16	53.56	52.17	224.10	127.92	171.40	367.49	92.40	328.92	298.18	93.45	57.63	59.06	40.27	40.98	92.99
20	E2_Ab	KnownBoundary	1	22.82	51.96	54.94	37.46	37.95	53.89	70.57	34.75	62.47	61.84	276.07	192.21	237.00	369.06	90.86	334.10	359.61	93.77	67.95	85.14	44.29	39.80	112.68
21	ER2b	ExonRegion	0	56.18	116.06	54.15	77.13	96.26	140.99	118.08	64.20	79.08	108.58	291.17	555.92	454.43	289.97	93.13	233.81	303.63	43.03	39.56	85.76	31.68	78.68	45.30
22	E2_Ac	KnownBoundary	0	95.28	188.98	96.68	155.46	136.42	115.22	112.97	83.09	110.21	140.49	354.46	598.70	267.51	220.14	166.76	294.79	336.23	46.26	118.59	95.49	20.02	112.55	88.09
23	ER2c	ExonRegion	0	110.59	261.72	76.44	111.14	124.66	154.64	136.11	80.42	80.75	127.57	309.06	661.24	413.84	289.16	151.70	283.87	324.41	47.12	56.75	90.02	32.53	111.51	45.11
24	E2_Ad	KnownBoundary	0	194.70	396.25	101.98	136.01	146.77	225.84	156.25	105.64	88.19	131.11	293.39	662.47	580.48	286.66	224.74	298.98	377.00	57.62	62.97	112.94	40.77	133.86	87.24
25	ER2d	ExonRegion	0	161.49	218.81	133.28	132.08	150.88	209.67	151.14	106.99	99.53	147.68	346.75	595.86	410.65	375.17	199.90	401.79	424.35	112.28	91.83	106.77	63.50	98.78	79.37
26	E2a_E3a	KnownJunction	0	154.18	163.79	137.49	145.24	97.71	323.28	139.38	80.59	115.88	122.89	203.16	633.96	283.26	362.65	170.34	264.20	267.04	49.50	42.35	94.09	51.15	113.77	63.42
27	E2a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.21	0.00	0.00	0.00	0.00	12.60	0.00	0.00	0.00	0.00	0.00	1.82	0.00	0.00	0.00	0.00	0.00
28	I2_AR6	ActiveIntronRegion	0	19.25	8.59	6.17	16.20	5.37	4.73	13.98	6.57	4.28	8.15	9.03	54.02	63.57	6.63	5.98	20.62	12.76	1.14	8.82	8.14	0.79	2.96	0.98
29	ER3a	ExonRegion	0	167.48	135.62	160.60	182.29	162.39	251.06	159.54	121.63	124.28	170.43	353.42	572.32	462.68	490.80	294.23	448.87	411.70	145.50	78.38	108.17	84.18	97.08	83.00
30	E3a_E4a	KnownJunction	0	205.89	185.76	161.44	172.31	203.74	224.13	203.63	113.16	152.95	202.14	436.53	472.65	327.41	492.85	363.56	472.61	409.16	162.41	115.58	95.17	91.37	104.77	75.89
31	ER4a	ExonRegion	0	171.40	162.73	161.51	172.62	177.61	247.48	153.73	132.14	124.82	175.65	413.29	362.62	404.56	448.05	291.98	438.07	472.42	167.65	86.21	100.55	96.32	97.81	93.44
32	E4a_E5a	KnownJunction	0	358.95	214.57	160.31	150.23	208.40	306.24	213.48	120.76	129.11	157.55	422.32	383.07	548.34	492.20	378.76	469.71	525.67	178.91	93.93	100.09	79.57	128.22	103.03
33	ER5a	ExonRegion	0	282.43	212.78	166.11	172.56	156.09	245.54	194.46	124.15	129.23	174.89	411.40	425.05	451.48	488.18	379.56	518.51	477.18	150.09	105.68	110.41	74.81	113.79	96.45
34	E5a_E6a	KnownJunction	0	361.18	253.31	202.77	211.86	220.88	228.96	179.96	130.41	160.21	190.02	430.85	331.01	548.02	489.97	471.23	620.35	495.09	136.17	114.92	110.58	95.69	119.28	116.35
35	I5_AR1	ActiveIntronRegion	0	50.82	24.16	37.24	37.84	28.82	24.45	37.28	22.99	10.43	17.85	19.80	43.87	44.74	19.69	15.14	27.86	23.35	5.23	5.46	17.99	7.64	7.85	7.01
36	I5_SR2	SilentIntronRegion	0	19.05	10.78	19.83	20.15	14.76	12.26	18.54	10.66	5.56	10.80	12.53	39.40	26.66	13.97	14.65	15.31	19.37	4.47	6.64	17.66	7.24	6.67	10.18
37	I5_AR2	ActiveIntronRegion	0	30.37	8.66	16.50	19.99	16.83	11.03	25.96	7.87	4.67	9.56	16.25	22.59	28.41	14.31	10.81	28.43	19.76	5.62	3.65	8.23	1.82	6.52	10.68
38	E6_Aa	NovelBoundary	0	105.72	36.70	48.49	60.33	62.82	40.09	76.67	31.30	9.84	15.96	12.74	23.41	41.72	23.96	18.30	76.05	25.99	6.96	31.44	12.34	3.15	14.14	23.13
39	ER6a	ExonRegion	0	379.08	187.35	212.65	219.19	197.70	266.75	165.36	141.63	131.67	179.41	397.28	307.15	441.63	474.93	377.92	469.45	460.03	123.81	81.91	120.05	106.44	112.46	90.70
40	E6_Da	NovelBoundary	0	2.89	2.43	31.08	36.73	3.74	8.35	6.58	36.60	14.18	14.51	4.69	43.96	12.99	12.48	13.85	11.02	8.70	9.20	0.00	6.07	0.00	8.70	0.00
41	E6a_E7a	KnownJunction	0	590.55	146.68	159.66	160.62	177.42	252.47	136.68	118.70	122.08	158.08	225.37	254.78	431.79	497.15	429.08	447.40	398.69	118.43	73.41	90.83	56.90	82.36	57.19
42	E6a_E8a	KnownJunction	0	80.53	6.64	19.60	21.54	7.30	11.36	17.71	23.41	13.57	7.95	21.48	0.00	13.96	59.04	36.34	78.01	39.83	9.74	0.00	12.02	8.90	44.33	7.43
43	I6	Intron	0	19.98	13.94	12.02	18.79	12.27	11.03	26.07	9.07	8.26	8.54	11.74	43.34	55.01	15.24	12.74	24.00	24.19	5.60	3.89	14.72	3.18	5.72	5.87
44	I6_SR1	SilentIntronRegion	0	20.82	14.41	12.70	19.40	11.92	10.59	24.94	9.93	8.28	8.76	12.59	43.12	55.15	15.80	13.01	25.97	26.95	6.13	4.23	14.95	3.27	5.82	6.24
45	I6_AR1	ActiveIntronRegion	0	20.17	16.04	8.42	19.08	15.70	13.65	34.72	5.74	11.26	8.47	8.37	50.59	67.55	12.07	14.01	16.42	11.84	3.86	3.32	17.44	3.93	6.83	3.96
46	I6_SR2	SilentIntronRegion	0	7.50	3.35	9.01	9.47	11.01	12.57	26.49	2.83	2.49	5.55	5.83	33.43	30.18	13.11	6.64	9.72	7.24	1.23	0.00	6.36	0.60	2.29	4.03
47	ER7a	ExonRegion	0	453.32	140.02	151.83	173.73	129.27	194.26	113.01	85.57	107.13	144.92	258.75	277.16	463.01	452.76	324.89	419.07	334.69	80.54	66.84	99.41	65.61	87.99	64.46
48	E7_Da	KnownBoundary	0	3.26	19.40	10.05	11.72	0.00	16.30	20.58	11.21	14.61	11.74	16.16	12.45	43.02	28.55	4.45	53.92	42.73	11.23	9.60	15.08	2.84	0.00	4.35
49	E7a_E7b	KnownJunction	0	25.86	25.39	69.66	144.40	46.26	73.65	18.72	23.12	31.68	76.96	17.27	12.60	34.09	27.25	26.45	29.48	16.83	22.97	48.94	30.49	0.00	2.39	8.19
50	E7a_E8a	KnownJunction	0	349.69	109.26	97.34	59.77	103.23	93.98	49.20	33.15	54.05	80.83	240.64	195.36	334.88	348.34	294.83	227.63	243.01	42.53	37.84	52.48	71.41	83.34	48.83
51	ER7b	ExonRegion	1	9.60	17.03	17.03	26.22	24.47	34.35	41.77	15.46	18.38	18.01	19.80	75.49	66.47	35.11	7.68	34.18	35.89	9.63	5.12	21.34	4.44	8.45	8.50
52	E7_Ab	KnownBoundary	0	32.60	33.02	36.43	23.77	10.70	40.60	31.80	19.26	21.35	28.74	18.00	68.12	56.00	20.90	13.35	25.63	71.90	12.27	8.28	33.75	11.49	16.66	3.50
53	ER7c	ExonRegion	0	58.24	83.30	113.74	126.99	26.14	133.23	36.46	47.13	60.60	81.68	55.98	89.98	89.17	67.20	44.29	73.09	75.13	49.24	34.39	53.68	8.97	9.34	3.96
54	E7_Db	NovelBoundary	0	20.74	6.64	7.10	26.34	17.66	22.71	16.69	12.86	10.45	18.43	22.85	74.42	86.68	52.15	9.52	52.29	58.25	15.34	4.80	17.07	11.74	2.57	4.35
55	E7b_E8a	KnownJunction	1	109.28	122.41	143.14	112.61	24.87	188.13	49.20	57.67	69.96	84.51	81.55	42.61	21.91	71.40	63.29	71.86	19.54	54.97	45.74	47.30	2.29	5.76	3.33
56	I7	Intron	0	25.18	21.94	8.47	20.64	23.54	19.51	31.87	14.55	11.84	16.75	19.36	66.20	61.61	31.59	13.34	30.49	28.87	7.67	4.05	14.03	3.63	13.55	5.80
57	I7_SR1	SilentIntronRegion	0	4.44	12.78	4.76	14.99	16.53	17.28	33.35	8.17	10.51	11.20	16.13	66.66	94.61	24.91	11.74	30.91	21.90	12.44	4.12	15.53	4.14	9.00	6.44
58	I7_AR1	ActiveIntronRegion	0	6.27	13.15	6.25	11.32	11.43	12.49	23.57	8.07	9.62	12.76	9.19	76.41	76.48	21.27	6.46	12.74	13.82	3.43	2.06	13.29	1.35	14.72	3.29
59	I7_SR2	SilentIntronRegion	0	9.83	8.92	8.39	17.19	17.38	18.50	26.70	14.68	12.44	23.26	22.42	110.53	86.26	39.53	7.24	55.39	48.46	9.19	5.18	17.71	5.70	14.96	11.55
60	I7_AR2	ActiveIntronRegion	0	12.78	12.76	5.82	13.98	15.34	21.67	26.52	9.62	10.48	13.22	27.81	64.10	45.17	38.46	6.60	45.90	44.96	19.85	7.11	17.15	9.63	12.64	7.46
61	I7_SR3	SilentIntronRegion	0	8.59	22.53	5.04	15.49	19.19	26.91	32.16	9.57	11.26	12.35	11.52	50.62	77.39	27.33	5.02	26.98	20.12	4.69	0.98	11.70	2.84	4.65	1.13
62	I7_AR3	ActiveIntronRegion	0	15.40	11.08	7.31	15.04	34.42	21.94	26.02	12.28	7.67	7.87	22.00	80.92	59.68	23.47	2.90	39.77	12.41	3.70	0.77	9.39	3.19	7.04	0.91
63	I7_SR4	SilentIntronRegion	1	22.36	13.09	5.51	15.67	38.63	2.87	22.18	12.21	10.73	6.88	23.32	65.75	41.33	17.76	3.45	53.50	13.82	2.89	4.18	12.90	1.38	9.64	3.67
64	I7_AR4	ActiveIntronRegion	0	16.72	19.37	5.26	17.13	22.75	18.50	28.95	8.55	8.81	11.32	21.95	66.16	51.49	36.16	5.67	26.19	40.36	4.29	4.20	12.81	4.59	8.64	4.34
65	I7_SR5	SilentIntronRegion	0	30.85	24.69	9.49	24.63	27.78	21.22	35.96	20.36	13.91	19.96	16.50	58.05	57.31	29.32	20.48	27.01	20.58	4.91	2.97	12.78	1.09	16.67	6.22
66	I7_AR5	ActiveIntronRegion	0	124.36	77.49	27.97	51.56	53.92	20.29	48.50	26.08	16.31	30.48	29.17	68.31	83.40	36.31	30.58	32.33	29.12	7.65	6.64	15.88	4.34	13.30	3.11
67	E8_Aa	NovelBoundary	0	198.11	86.50	29.69	56.94	49.49	56.96	39.08	37.34	27.11	30.00	39.38	68.72	52.59	50.27	53.65	54.43	43.29	23.59	35.11	17.32	6.30	32.58	10.76
68	ER8a	ExonRegion	0	594.54	251.51	258.82	278.23	334.10	406.35	280.39	158.22	125.59	198.10	412.99	334.31	452.47	494.75	407.46	458.79	433.14	141.81	104.78	122.32	91.33	107.45	93.00
69	E8a_E9a	KnownJunction	0	371.84	227.53	156.97	202.01	416.47	265.24	245.10	80.87	92.88	114.06	194.21	248.93	277.25	357.82	352.93	400.07	220.10	117.44	132.62	81.37	30.21	85.60	88.95
70	E8a_E9b	KnownJunction	1	201.52	103.14	121.70	127.12	132.34	142.65	107.71	71.47	28.99	70.89	121.29	114.19	160.38	225.56	157.36	238.83	113.23	46.34	62.87	29.08	26.69	42.37	26.46
71	I8_SR4	SilentIntronRegion	0	31.66	14.29	10.49	13.98	24.48	18.18	23.12	10.58	6.53	8.86	9.83	8.16	19.70	12.58	11.87	23.52	13.79	3.35	4.83	3.75	1.94	4.63	1.79
72	I8_AR3	ActiveIntronRegion	0	110.96	15.14	12.82	23.00	22.95	22.59	32.36	24.57	5.80	19.17	17.27	10.97	16.32	14.69	22.18	44.43	16.31	4.69	5.69	6.55	0.75	3.89	3.05
73	E9_Aa	NovelBoundary	0	67.94	23.29	1.80	10.72	34.21	28.05	24.07	0.00	2.89	6.23	4.47	13.65	6.82	0.00	5.44	7.43	0.00	0.00	10.73	0.00	3.09	0.00	4.18
74	ER9a	ExonRegion	0	325.41	213.02	184.11	214.31	352.53	279.65	207.86	103.71	103.13	138.49	216.00	269.51	350.58	387.35	384.42	465.88	248.39	127.49	137.77	88.30	45.18	94.80	85.16
75	ER9b	ExonRegion	0	431.12	226.23	269.18	339.19	507.75	396.99	303.46	208.86	133.75	235.15	391.21	399.28	560.19	492.19	442.29	425.14	393.55	138.48	147.48	120.99	77.26	128.87	81.15
76	E9_Da	KnownBoundary	0	497.20	166.22	340.23	447.83	339.98	274.27	224.13	223.81	148.15	249.44	325.29	526.97	501.43	446.64	495.46	335.55	375.32	99.36	92.80	114.86	75.49	128.41	77.77
77	ER9c	ExonRegion	0	634.87	145.03	192.21	267.39	279.46	288.49	194.20	151.00	100.99	171.62	287.60	345.06	390.63	476.67	410.30	374.40	289.02	96.24	137.46	96.80	43.37	121.17	71.57
78	E9_Db	KnownBoundary	0	27.04	2.89	11.62	8.79	3.48	31.69	0.00	14.58	23.18	27.88	19.32	6.30	0.00	7.77	12.86	7.52	21.32	4.68	0.00	3.07	0.00	2.88	3.33
79	E9_Dc	KnownBoundary	1	1931.97	279.49	54.08	87.57	477.76	374.95	379.89	60.13	47.11	61.97	95.97	155.45	442.50	141.68	109.65	172.26	84.43	20.44	112.66	28.25	9.08	59.76	44.73
80	ER9d	ExonRegion	1	1188.42	208.44	54.53	73.60	351.86	364.01	289.95	66.55	50.64	63.08	122.74	365.84	487.76	296.40	356.85	176.84	108.93	17.55	98.75	28.72	8.81	71.88	42.58
81	ER9e	ExonRegion	0	383.14	195.96	164.33	230.07	296.01	252.94	202.45	159.03	97.06	163.87	142.46	371.14	314.41	216.29	279.66	127.71	120.00	14.91	33.66	56.20	6.22	94.28	29.40
82	ER9f	ExonRegion	0	31.75	15.00	4.44	5.45	14.72	13.52	17.71	7.56	1.70	7.45	4.59	14.07	8.79	8.93	18.13	4.09	3.30	1.15	0.00	3.99	0.00	1.82	0.00