Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 POLE4 Gene 0 21.14 10.68 28.65 12.44 12.48 18.06 16.69 15.96 12.01 23.51 156.96 12.16 17.08 52.01 62.78 39.56 40.75 19.84 7.43 15.49 31.19 40.35 24.42 2 483063 Transcript 0 1.89 1.84 1.16 1.15 0.34 1.77 2.30 0.82 1.61 1.47 1.41 0.46 6.98 0.80 1.93 1.88 1.10 4.70 1.13 2.11 0.60 0.75 2.10 3 393918 Transcript 0 0.00 0.15 0.09 0.00 0.00 0.13 0.00 0.00 0.09 0.25 0.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.16 0.00 0.00 4 485527 Transcript 0 0.87 3.07 1.43 1.57 3.03 0.02 3.50 2.82 1.37 0.90 10.01 1.97 0.52 3.07 3.03 2.71 0.59 1.70 0.00 3.92 1.25 1.23 3.30 5 459636 Transcript 0 1.82 1.05 1.36 0.70 1.99 2.41 2.35 1.33 1.68 1.27 4.31 2.85 3.80 1.55 0.47 1.86 3.77 1.26 1.46 4.38 0.38 2.02 1.01 6 233699 Transcript 0 0.00 0.03 0.00 0.00 0.84 0.10 2.07 0.00 0.98 3.08 9.64 0.08 3.19 12.49 0.30 0.00 0.00 0.00 0.02 0.70 2.10 2.78 0.00 7 465242 Transcript 0 12.62 2.41 0.54 1.02 6.89 36.48 8.01 0.11 2.28 0.51 24.16 0.00 1.15 8.95 6.80 9.74 1.04 2.83 0.00 0.63 1.96 2.64 7.50 8 473023 Transcript 0 0.33 0.56 1.19 0.19 0.10 1.40 0.58 0.25 1.36 0.73 4.62 0.09 0.91 1.08 2.26 2.21 0.60 0.52 0.08 0.64 1.35 1.01 1.09 9 ER1a ExonRegion 0 0.31 0.35 0.17 0.66 0.00 0.71 0.47 0.00 0.60 0.00 1.48 0.00 0.00 1.27 0.76 1.44 1.75 7.05 1.03 0.23 0.22 0.42 0.77 10 E1_Ab KnownBoundary 0 3.78 3.35 4.11 1.63 0.00 2.44 7.77 0.00 0.00 0.00 4.58 0.00 0.00 9.01 5.69 7.18 8.88 3.19 0.00 3.00 2.84 2.69 3.16 11 ER1b ExonRegion 1 65.87 33.57 12.64 2.99 14.51 38.77 32.61 2.40 0.56 6.86 125.57 0.00 0.16 30.17 125.06 29.56 42.04 8.75 0.95 2.20 32.51 20.21 27.20 12 E1_Ac KnownBoundary 0 19.63 8.09 11.86 3.93 4.16 2.27 11.57 9.12 0.00 9.35 30.22 0.00 0.00 0.00 11.50 7.18 12.53 6.72 0.00 0.00 11.98 7.29 19.72 13 E1_Ad KnownBoundary 0 9.63 8.55 13.39 0.00 7.72 7.89 11.35 4.64 5.12 9.94 27.64 0.00 0.00 2.30 9.52 3.93 12.06 9.37 4.52 3.13 13.96 0.00 11.69 14 ER1c ExonRegion 1 95.24 46.77 37.99 4.09 34.78 45.84 51.63 8.64 4.94 17.20 222.28 0.00 9.38 50.35 176.98 53.50 75.92 27.72 6.37 6.38 55.09 35.42 64.61 15 ER1d ExonRegion 0 37.68 17.36 35.48 3.74 18.51 20.32 25.29 10.55 9.11 20.58 121.62 1.06 9.54 35.32 54.96 23.88 51.01 24.39 5.37 12.02 33.47 19.67 36.95 16 E1_Ae KnownBoundary 0 12.59 11.31 21.52 8.52 8.06 0.00 2.25 6.86 24.51 9.56 120.03 6.00 12.99 28.14 22.50 23.58 34.22 49.04 3.67 14.13 14.89 8.39 12.38 17 ER1e ExonRegion 1 46.06 13.46 56.86 23.39 15.63 4.95 10.82 26.03 38.00 53.87 460.53 11.91 8.02 130.34 201.72 107.47 146.00 76.52 34.75 36.26 90.44 68.57 64.75 18 E1_Da NovelBoundary 1 3.70 6.51 0.00 1.73 4.33 0.00 0.00 0.00 0.00 0.00 27.80 5.55 0.00 0.00 0.00 44.09 4.77 10.53 4.80 6.07 5.75 6.25 0.00 19 E1a_E3b KnownJunction 1 58.83 26.18 109.19 40.19 7.64 17.21 14.75 72.13 38.98 81.50 413.10 17.41 6.82 223.32 445.02 213.45 133.89 118.56 21.18 38.29 73.45 118.92 137.61 20 ER2a ExonRegion 0 6.20 4.82 1.08 0.33 7.25 47.81 6.25 0.22 1.61 1.01 27.58 0.00 2.29 2.83 4.45 16.14 2.07 1.48 0.00 1.26 3.92 2.96 11.00 21 E2a_E3b KnownJunction 0 19.04 0.00 0.00 1.70 6.54 25.16 9.76 0.00 2.95 0.00 20.74 0.00 0.00 15.07 9.15 3.33 0.00 4.19 0.00 0.00 0.00 2.33 4.01 22 ER3a ExonRegion 0 0.33 0.56 1.19 0.19 0.10 1.40 0.58 0.25 1.36 0.73 4.62 0.09 0.91 1.08 2.26 2.21 0.60 0.52 0.08 0.64 1.35 1.01 1.09 23 E3_Ab KnownBoundary 0 0.00 0.00 1.33 0.00 0.00 0.00 2.25 0.00 1.16 0.00 0.00 0.00 0.00 2.30 0.00 3.42 0.00 0.00 0.00 0.00 0.00 0.00 3.93 24 ER3b ExonRegion 0 58.43 36.14 123.25 44.10 28.57 49.12 48.84 70.80 55.52 102.24 641.24 23.86 47.57 232.02 285.70 211.06 152.00 110.62 28.14 54.66 107.01 155.89 144.70 25 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 4.51 6.95 0.00 6.82 18.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.82 0.00 26 E3a_E5a KnownJunction 0 30.60 48.61 127.88 40.12 72.33 109.99 111.69 99.89 50.14 121.47 1005.94 50.42 71.10 270.12 257.12 168.25 234.22 70.84 9.13 74.40 208.93 235.57 91.17 27 ER4a ExonRegion 0 0.00 0.08 0.00 0.00 2.52 0.29 2.31 0.00 1.14 3.06 12.24 0.25 2.76 11.62 0.91 0.00 0.00 0.00 0.06 2.09 3.28 5.52 0.00 28 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 3.89 0.00 0.00 1.67 9.74 0.00 0.00 7.06 0.00 0.00 0.00 0.00 0.00 0.00 3.03 0.00 0.00 29 ER5a ExonRegion 0 18.75 36.02 156.79 51.34 88.49 129.54 129.09 99.59 60.20 135.69 950.34 76.18 66.44 241.57 240.80 142.03 223.28 67.66 14.49 68.08 179.08 207.86 76.77 30 E5_Da KnownBoundary 0 7.11 3.16 1.63 1.96 0.00 0.00 5.48 5.75 1.79 1.10 13.21 11.25 6.66 4.41 8.90 7.95 4.11 2.57 0.00 8.37 0.00 0.00 0.00 31 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E5a_E8a KnownJunction 0 18.08 58.74 155.58 57.37 124.62 178.53 178.99 76.03 57.61 115.29 729.55 55.22 48.37 256.58 320.29 117.32 203.65 58.99 22.59 71.14 142.95 186.88 74.01 33 ER5b ExonRegion 0 0.87 3.07 1.43 1.57 3.03 0.02 3.50 2.82 1.37 0.90 10.01 1.97 0.52 3.07 3.03 2.71 0.59 1.70 0.00 3.92 1.25 1.23 3.30 34 ER6a ExonRegion 0 0.00 0.15 0.09 0.00 0.00 0.13 0.00 0.00 0.09 0.25 0.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.16 0.00 0.00 35 E7_Aa NovelBoundary 0 6.82 0.00 9.85 3.00 6.28 2.50 8.13 4.03 4.57 9.70 11.74 12.60 18.18 0.00 0.00 15.55 8.42 5.64 0.00 14.38 5.87 5.94 3.93 36 ER7a ExonRegion 0 3.63 2.09 2.71 1.39 3.98 4.82 4.71 2.65 3.36 2.54 8.62 5.71 7.60 3.10 0.94 3.73 7.55 2.52 2.91 8.76 0.76 4.03 2.01 37 I7_AR2 ActiveIntronRegion 0 25.40 4.93 7.90 6.62 10.65 7.92 11.42 12.24 6.21 9.54 7.37 5.68 8.84 2.37 3.31 4.62 3.70 3.57 1.43 4.89 2.22 6.47 3.29 38 ER8a ExonRegion 0 77.15 33.46 104.32 52.56 43.68 54.42 51.77 58.93 34.54 83.16 546.12 52.94 59.94 196.26 210.41 134.09 128.02 53.57 22.67 47.29 112.17 166.60 70.49 39 E8_Da KnownBoundary 0 45.42 17.89 16.88 9.49 6.54 6.53 37.98 4.85 2.23 5.48 88.29 5.85 24.67 51.45 58.35 29.65 18.42 8.17 0.00 14.96 20.20 31.05 24.24 40 E8_Db KnownBoundary 0 3.33 2.89 0.00 0.00 0.00 0.00 0.00 0.00 1.62 3.17 0.00 0.00 12.34 2.35 4.45 0.00 0.00 3.81 0.00 6.52 0.00 0.00 3.59 41 ER8b ExonRegion 0 42.59 12.71 17.92 11.24 4.01 5.96 27.14 4.75 4.63 7.31 66.69 4.33 17.59 28.42 39.89 28.61 12.38 13.86 0.00 18.62 19.83 17.71 17.99 42 ER8c ExonRegion 0 3.47 3.33 2.14 1.64 0.69 2.83 4.12 1.63 2.62 2.94 1.33 0.92 13.95 0.33 3.11 2.31 0.45 2.36 1.23 3.98 0.97 1.07 3.43 43 IG19_AR9 ActiveIntergenicRegion 0 9.29 2.01 0.00 2.04 6.29 0.73 1.45 2.30 1.35 0.34 8.81 0.66 1.09 1.55 0.41 0.29 0.33 0.46 0.53 0.65 1.53 2.23 1.25 44 IG19_SR7 SilentIntergenicRegion 0 13.59 2.03 0.19 1.79 11.24 0.48 2.49 2.16 2.56 0.54 12.34 0.19 1.66 2.05 0.68 0.00 0.17 0.58 1.00 0.62 1.73 1.44 1.18 45 IG19_AR10 ActiveIntergenicRegion 0 8.05 1.77 0.00 0.21 7.88 0.29 1.30 1.02 1.75 0.29 13.61 1.13 2.41 1.38 0.16 0.94 1.05 0.81 0.45 1.11 0.35 2.64 1.86 46 IG19_SR8 SilentIntergenicRegion 0 6.23 2.85 0.00 0.19 4.80 0.26 0.48 0.72 1.29 0.68 13.83 1.21 5.05 1.45 0.00 0.00 1.85 0.76 0.55 0.42 0.62 2.63 0.82