Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	HTRA2	Gene	0	79.82	37.43	125.31	91.00	44.02	134.80	59.44	56.79	44.59	78.33	44.79	16.52	13.16	74.84	77.07	62.44	62.55	64.66	43.78	39.20	41.86	31.09	33.42
2	258080	Transcript	0	2.44	1.03	4.91	4.09	1.26	18.44	4.50	2.85	1.37	4.92	5.44	0.57	0.16	8.71	7.22	6.29	6.41	4.59	4.74	2.41	1.39	1.26	1.99
3	462909	Transcript	0	3.04	0.00	5.14	0.00	0.00	2.90	0.00	7.93	0.00	0.00	2.58	0.00	0.00	0.00	0.00	4.36	0.00	8.79	0.00	0.00	0.00	0.00	0.00
4	467961	Transcript	0	3.78	0.00	5.00	6.69	4.07	12.95	0.00	0.00	3.24	1.61	0.00	0.00	8.12	4.47	0.00	0.00	0.00	2.36	0.00	3.26	0.00	0.00	0.00
5	484881	Transcript	0	1.78	1.41	3.12	3.46	0.00	0.00	1.88	2.05	0.00	0.83	1.29	0.00	0.00	1.24	0.00	4.23	2.34	0.83	0.00	1.34	0.00	0.00	1.84
6	352222	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	437202	Transcript	0	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	484352	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	465521	Transcript	0	80.92	25.13	49.60	38.34	40.11	90.47	47.43	48.63	18.14	37.69	11.28	4.33	3.44	23.98	27.47	17.70	33.16	14.56	16.60	18.58	11.56	5.65	12.99
10	482205	Transcript	0	2.82	0.81	1.96	0.00	4.28	5.38	3.53	0.69	0.00	2.22	0.00	0.00	0.00	6.60	3.67	1.19	4.18	0.00	0.00	0.00	3.23	3.33	3.13
11	482331	Transcript	0	29.11	9.49	37.78	27.13	20.36	37.56	27.90	18.08	10.68	23.82	5.70	3.12	1.77	10.13	9.04	7.91	11.64	16.97	7.78	8.39	3.75	5.26	3.38
12	ER1a	ExonRegion	0	1.24	0.59	2.90	1.37	0.00	1.27	1.04	2.63	1.34	0.28	3.67	0.00	0.00	2.51	8.30	2.61	2.89	1.04	0.00	0.31	0.32	0.00	0.86
13	E1_Ab	KnownBoundary	0	38.53	3.16	10.44	3.73	7.56	92.96	13.34	2.55	1.36	4.84	5.37	0.00	0.00	4.89	4.45	0.00	0.00	12.31	4.52	3.26	0.00	3.12	0.00
14	ER1b	ExonRegion	0	4.61	0.00	4.12	3.03	0.00	26.11	11.15	1.69	2.10	2.45	1.82	0.00	0.00	5.68	10.97	2.08	0.00	7.10	0.00	0.00	0.00	0.00	0.00
15	E1_Ac	KnownBoundary	0	17.26	0.00	3.34	5.56	0.00	28.56	24.16	2.34	1.79	7.76	2.11	0.00	0.00	0.00	4.45	7.52	4.77	11.57	0.00	0.00	0.00	0.00	0.00
16	ER1c	ExonRegion	0	12.47	1.90	5.11	2.46	1.54	35.51	14.45	1.99	3.89	4.86	3.58	0.00	0.00	5.56	10.74	8.03	2.81	4.44	0.00	0.00	0.00	1.86	2.69
17	E1_Ad	KnownBoundary	0	41.86	2.57	6.48	1.83	8.66	67.40	23.10	2.34	6.63	3.09	2.68	0.00	0.00	7.06	8.90	8.63	8.98	2.11	0.00	0.00	0.00	2.51	3.41
18	ER1d	ExonRegion	0	11.66	4.77	9.44	10.63	4.94	37.43	7.74	3.15	4.97	8.44	7.35	1.30	1.67	8.48	8.16	11.16	5.35	18.87	1.88	5.77	0.10	1.41	5.84
19	E1_Da	KnownBoundary	0	0.00	0.00	13.33	11.85	4.33	22.77	3.97	3.61	3.56	10.29	10.37	5.70	0.00	4.30	4.45	0.00	4.58	16.13	0.00	0.00	0.00	0.00	4.01
20	E1a_E1i	KnownJunction	0	3.04	0.00	5.14	0.00	0.00	2.90	0.00	7.93	0.00	0.00	2.58	0.00	0.00	0.00	0.00	4.36	0.00	8.79	0.00	0.00	0.00	0.00	0.00
21	E1a_E1j	KnownJunction	0	3.78	0.00	5.00	6.69	4.07	12.95	0.00	0.00	3.24	1.61	0.00	0.00	8.12	4.47	0.00	0.00	0.00	2.36	0.00	3.26	0.00	0.00	0.00
22	E1a_E2c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER1e	ExonRegion	0	6.08	2.50	11.81	10.90	3.77	54.05	12.44	5.92	2.76	14.47	12.66	1.72	0.48	23.61	13.35	16.27	16.34	12.72	14.21	6.93	3.84	3.79	5.12
24	E1_Ae	KnownBoundary	0	11.85	7.63	25.25	19.11	7.89	144.29	18.50	12.61	7.93	30.33	28.43	6.30	12.01	30.73	54.76	27.34	42.08	16.33	35.77	26.59	8.46	11.21	11.52
25	ER1f	ExonRegion	1	6.08	7.23	36.54	17.21	5.49	85.04	18.91	9.32	11.07	35.12	41.11	2.55	3.27	35.96	43.83	47.93	48.75	24.68	20.93	23.21	23.81	16.04	25.64
26	E1_Af	KnownBoundary	0	3.78	17.83	52.33	25.24	11.97	62.86	29.01	14.66	22.08	39.84	48.22	0.00	6.66	43.20	33.01	56.40	34.03	42.49	0.00	9.46	43.31	26.51	42.85
27	ER1g	ExonRegion	1	8.05	7.26	72.59	30.78	8.75	54.40	15.30	18.98	22.37	51.65	53.26	6.16	1.30	53.94	39.25	50.72	62.82	33.76	17.64	23.49	38.70	16.45	27.91
28	E1_Ag	KnownBoundary	0	12.74	6.18	69.07	28.43	7.98	58.83	8.26	20.99	29.02	57.59	75.12	6.90	6.33	61.98	67.50	76.13	74.71	30.76	22.49	20.26	58.63	13.66	7.77
29	ER1h	ExonRegion	0	19.41	11.95	81.11	34.55	17.95	99.65	21.27	31.02	26.13	58.92	45.89	6.44	6.90	76.83	68.54	52.85	50.67	56.42	31.21	37.25	51.64	18.22	33.11
30	E1_Ah	KnownBoundary	0	44.08	35.91	55.70	35.66	24.28	93.53	23.67	26.37	26.30	39.46	25.37	0.00	0.00	74.22	67.62	18.88	47.03	50.86	26.26	55.80	35.15	11.82	15.37
31	E1_Ai	KnownBoundary	0	24.67	3.03	58.40	26.17	16.81	76.21	21.90	27.44	12.38	37.69	18.16	12.15	0.00	63.69	45.99	42.98	49.74	33.54	14.12	44.87	34.10	0.00	20.15
32	ER1i	ExonRegion	0	44.67	19.16	110.35	57.31	22.39	133.29	34.56	32.75	26.72	71.23	38.25	7.29	0.99	120.44	81.69	53.65	68.97	68.76	26.49	69.54	56.95	10.53	33.38
33	E1_Aj	KnownBoundary	0	89.20	42.36	129.68	49.71	44.14	178.82	52.11	37.34	39.58	84.51	69.70	20.11	0.00	85.64	96.67	75.96	65.64	62.22	61.65	46.53	35.15	17.51	48.49
34	ER1j	ExonRegion	0	63.76	24.02	138.47	64.48	38.30	161.15	50.15	46.99	45.47	90.46	60.52	18.40	4.98	134.40	93.75	84.89	82.73	85.92	51.36	65.03	55.64	16.02	47.72
35	ER1k	ExonRegion	0	83.42	45.22	169.29	95.40	45.91	224.62	73.86	47.21	61.66	107.22	75.76	12.65	15.27	137.38	115.14	114.92	83.49	119.96	81.76	62.24	60.84	45.06	50.21
36	E1b_E2c	KnownJunction	0	65.72	57.49	208.69	146.43	76.15	242.99	118.93	60.58	73.64	123.62	67.91	6.30	21.91	165.34	114.72	105.96	104.63	146.79	91.67	68.97	90.81	83.52	69.06
37	ER2a	ExonRegion	0	2.82	0.81	1.96	0.00	4.28	5.38	3.53	0.69	0.00	2.22	0.00	0.00	0.00	6.60	3.67	1.19	4.18	0.00	0.00	0.00	3.23	3.33	3.13
38	ER2b	ExonRegion	0	25.05	11.52	33.09	18.17	16.95	43.71	24.05	12.68	12.76	25.04	12.56	1.44	2.35	36.27	30.46	27.74	22.56	20.63	14.33	11.35	24.98	17.36	23.98
39	ER2c	ExonRegion	0	103.84	56.13	293.81	152.68	65.71	212.67	99.48	93.32	87.02	164.82	97.55	25.91	21.86	172.45	195.75	144.69	165.58	141.47	92.91	101.85	105.23	63.51	75.88
40	E2a_E3a	KnownJunction	0	134.84	85.51	384.29	218.85	114.35	322.71	125.64	146.51	112.85	201.41	141.19	70.82	34.25	230.33	261.82	229.94	203.93	219.66	153.23	99.33	111.82	137.96	119.08
41	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER3a	ExonRegion	0	169.47	113.18	424.64	276.96	139.34	414.54	183.08	197.06	146.91	235.35	157.30	55.35	42.19	244.69	249.34	204.53	204.08	230.05	165.51	128.29	123.35	114.82	117.06
43	E3_Da	KnownBoundary	0	89.65	11.77	56.06	53.34	25.13	95.74	63.99	46.99	21.56	36.34	4.63	7.20	0.00	21.60	36.34	24.18	10.75	16.50	9.22	17.19	5.44	8.08	0.00
44	E3a_E3b	KnownJunction	0	283.09	174.71	310.81	267.96	230.39	349.74	189.37	169.47	120.75	181.61	174.31	102.48	79.05	272.94	271.96	257.28	222.25	203.74	179.96	112.37	121.33	141.08	143.07
45	ER3b	ExonRegion	0	58.13	17.36	44.54	35.32	21.81	63.00	39.63	43.99	23.32	36.85	10.38	5.23	1.17	15.37	20.59	7.72	23.56	12.07	13.85	16.52	6.01	6.34	4.34
46	E3_Db	KnownBoundary	0	114.76	34.20	65.23	61.90	47.28	80.58	75.47	59.31	30.06	56.57	9.53	12.60	0.00	29.31	24.97	25.89	34.78	10.57	16.94	22.56	13.96	5.57	11.44
47	ER3c	ExonRegion	0	80.92	25.13	49.60	38.34	40.11	90.47	47.43	48.63	18.14	37.69	11.28	4.33	3.44	23.98	27.47	17.70	33.16	14.56	16.60	18.58	11.56	5.65	12.99
48	E3_Ab	NovelBoundary	0	74.09	15.00	43.76	33.00	48.90	87.51	54.94	33.80	22.60	27.18	9.95	6.30	6.82	7.30	38.82	7.35	17.67	18.24	41.79	3.26	2.66	11.82	12.29
49	E3_Dc	NovelBoundary	0	41.19	15.92	20.25	25.57	21.56	26.69	37.19	4.89	18.52	10.80	7.00	0.00	18.51	7.89	13.10	15.72	11.31	3.32	12.80	2.30	6.24	9.37	0.00
50	ER3d	ExonRegion	0	279.91	152.69	391.56	322.49	221.42	374.17	178.24	211.66	163.14	235.59	173.56	124.29	72.50	262.43	272.36	231.45	221.30	262.69	174.66	116.75	135.07	134.21	148.42
51	E3_Dd	KnownBoundary	0	34.38	15.19	27.76	43.85	32.85	84.67	23.67	18.69	13.74	19.96	6.26	0.00	6.82	9.65	4.45	4.36	26.37	4.97	17.60	18.41	8.46	11.82	11.10
52	E3d_E3c	KnownJunction	0	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	E3d_E3d	KnownJunction	0	308.80	113.80	346.44	233.20	192.95	350.76	131.65	155.59	141.29	183.14	129.03	154.40	70.29	226.09	266.15	194.56	201.96	190.31	138.36	106.61	127.38	106.12	138.37
54	ER3e	ExonRegion	0	291.02	137.27	401.16	323.00	203.36	369.05	153.74	208.49	164.89	240.85	154.15	107.15	76.21	252.14	260.39	189.84	228.59	248.29	166.04	127.66	143.79	120.58	150.14
55	ER3f	ExonRegion	0	50.74	28.32	52.38	70.87	41.34	123.37	52.30	42.26	22.23	41.72	18.80	3.68	7.97	26.76	37.79	15.98	30.78	18.66	26.92	31.22	12.84	16.15	13.29
56	E3_De	KnownBoundary	0	56.97	35.45	51.95	61.36	33.28	120.21	71.90	47.44	19.18	44.11	14.06	6.30	12.99	16.66	41.78	15.38	20.94	16.66	21.55	41.80	14.64	6.06	3.93
57	E3e_E3d	KnownJunction	0	3.56	2.83	6.24	6.93	0.00	0.00	3.75	4.11	0.00	1.67	2.58	0.00	0.00	2.47	0.00	4.36	4.68	1.66	0.00	2.68	0.00	0.00	3.67
58	ER3g	ExonRegion	0	66.17	19.87	71.44	89.46	51.37	74.90	57.63	44.23	26.59	48.80	14.43	7.33	5.71	24.29	25.94	20.39	16.04	19.02	16.15	21.17	10.26	11.47	8.79
59	E3_Ac	KnownBoundary	0	64.38	43.08	59.34	50.61	50.34	65.02	55.91	15.44	19.53	36.56	16.37	12.60	6.33	21.66	23.61	15.81	17.95	18.74	8.75	35.03	15.20	2.33	4.35
60	E3_Ad	KnownBoundary	0	126.39	31.11	54.82	61.46	74.87	71.95	65.85	40.29	21.33	27.18	7.05	6.30	6.82	22.43	34.24	33.15	17.86	13.22	22.59	28.38	11.31	5.76	4.01
61	ER3h	ExonRegion	0	84.87	39.79	80.79	71.55	67.25	86.01	55.74	38.83	31.25	44.77	15.40	13.57	6.88	28.58	28.24	32.59	27.95	29.75	23.57	35.60	18.36	5.97	8.71
62	ER3i	ExonRegion	0	310.30	145.76	448.74	370.42	196.17	453.30	216.27	221.92	167.95	289.73	173.67	84.98	83.93	261.76	261.33	214.53	249.99	215.62	175.32	137.41	162.70	129.32	115.84
63	E3_Df	KnownBoundary	0	38.15	12.23	39.12	20.71	31.24	36.68	24.55	0.00	8.16	29.39	0.00	0.00	0.00	4.94	0.00	0.00	13.56	2.36	13.65	14.32	2.97	2.69	3.59
64	E3f_E3e	KnownJunction	0	392.96	160.70	460.98	452.06	219.27	523.11	223.86	221.96	131.97	294.30	171.31	95.43	116.23	275.12	284.20	252.07	159.79	158.89	182.03	100.22	146.97	114.57	90.40
65	ER3j	ExonRegion	0	29.11	9.49	37.78	27.13	20.36	37.56	27.90	18.08	10.68	23.82	5.70	3.12	1.77	10.13	9.04	7.91	11.64	16.97	7.78	8.39	3.75	5.26	3.38
66	E3_Ae	KnownBoundary	0	57.42	6.18	53.52	41.09	33.79	59.91	37.71	23.04	13.19	27.21	4.79	0.00	6.17	14.19	17.06	4.27	12.81	18.32	0.00	14.32	6.30	6.25	8.71
67	ER3k	ExonRegion	0	286.94	141.52	438.25	400.42	140.19	405.40	172.40	199.67	167.38	293.20	139.89	55.59	64.57	269.92	282.56	218.56	183.32	205.96	174.23	106.31	140.29	123.08	105.19
68	E3_Dg	NovelBoundary	0	118.32	103.80	249.43	221.65	50.17	202.27	121.62	95.25	114.26	167.62	59.96	12.45	11.69	128.02	155.02	105.61	117.91	146.95	55.06	62.13	71.91	64.42	55.83
69	E3h_E4a	KnownJunction	0	481.34	130.11	345.61	413.03	151.10	353.72	117.83	138.38	185.68	217.98	128.56	72.62	38.80	213.14	190.99	196.87	188.22	246.03	142.40	119.46	177.55	107.89	138.80
70	E3h_E5a	KnownJunction	0	24.45	37.82	96.45	37.92	34.30	72.91	94.15	25.01	16.44	65.89	0.00	11.70	6.82	55.15	47.72	46.57	17.11	32.79	9.22	17.71	0.00	5.76	0.00
71	ER3l	ExonRegion	0	338.48	147.04	399.47	391.36	130.08	362.25	179.86	161.94	182.61	278.96	130.40	65.61	34.63	265.23	238.13	222.45	212.02	244.47	116.39	124.06	161.38	112.83	124.02
72	I3	Intron	0	23.08	11.25	31.97	32.76	23.84	31.27	39.05	22.55	8.20	15.49	5.64	5.83	4.87	7.47	4.30	5.02	11.66	7.34	10.28	19.28	0.00	6.72	3.61
73	I3_SR1	SilentIntronRegion	0	20.91	11.82	31.59	33.96	24.33	29.95	42.65	21.83	8.29	17.30	7.07	6.28	3.81	9.06	5.03	6.39	11.43	9.66	11.31	20.36	0.00	8.15	4.71
74	I3_AR1	ActiveIntronRegion	0	27.72	10.33	33.29	30.97	23.32	34.38	32.73	24.37	8.16	12.25	2.97	5.06	7.04	4.51	2.95	2.44	12.29	2.95	8.45	17.53	0.00	4.06	1.52
75	E4_Aa	NovelBoundary	0	35.41	34.60	61.09	55.10	41.68	24.59	36.39	23.21	22.05	19.66	17.43	5.70	6.17	14.13	23.98	8.12	4.02	9.78	27.48	30.68	5.87	5.39	15.71
76	ER4a	ExonRegion	0	193.66	74.65	277.21	280.88	89.50	261.18	101.26	139.39	123.18	186.93	96.56	53.49	33.86	125.65	143.76	138.27	111.71	151.67	85.08	72.05	109.70	84.06	74.82
77	E4_Da	NovelBoundary	0	30.08	8.62	76.02	44.62	31.92	29.98	22.21	41.69	8.83	46.01	2.58	19.06	0.00	9.30	14.96	17.77	12.72	3.27	8.28	42.70	5.37	5.33	8.62
78	E4a_E5a	KnownJunction	0	215.96	99.39	338.90	380.00	195.59	475.52	226.73	157.40	143.34	207.40	89.13	69.32	12.99	198.60	208.30	120.05	139.60	125.19	149.65	98.75	144.37	101.46	77.42
79	E5_Aa	NovelBoundary	0	27.56	25.92	58.31	54.11	51.44	69.16	47.52	19.51	15.16	34.25	10.00	6.15	0.00	26.84	18.91	11.54	9.54	12.52	4.80	17.00	8.53	7.90	11.10
80	ER5a	ExonRegion	0	139.22	60.67	108.96	87.22	40.36	171.67	78.88	48.87	36.81	66.28	14.83	13.16	8.77	57.67	62.16	49.49	31.89	51.30	28.42	22.51	23.33	23.39	20.78
81	E5_Da	KnownBoundary	0	684.94	155.24	24.45	19.74	147.28	347.53	242.67	15.16	7.58	14.08	10.27	11.25	0.00	19.48	16.44	43.66	13.09	11.86	35.86	20.90	8.83	39.19	49.68
82	ER5b	ExonRegion	0	164.93	33.71	0.00	0.00	8.70	88.76	46.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.16	0.00	0.00
83	E5_Db	KnownBoundary	0	57.94	36.57	55.50	56.77	35.74	47.30	42.13	17.13	8.56	23.88	10.00	0.00	0.00	21.96	0.00	8.20	4.21	5.51	35.01	9.59	0.00	27.80	16.22
84	ER5c	ExonRegion	0	8.35	0.00	0.00	0.00	0.00	0.00	0.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
85	E5_Dc	KnownBoundary	0	15.85	13.55	63.87	28.17	7.05	26.52	10.73	20.87	4.86	19.31	2.05	0.00	0.00	2.47	0.00	0.00	0.00	13.85	32.38	8.76	13.53	30.80	7.60
86	ER5d	ExonRegion	0	7.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
87	ER5e	ExonRegion	0	0.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
88	ER5f	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00