Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MOGS Gene 0 113.58 37.97 155.93 91.47 53.80 90.23 63.66 73.60 65.48 117.86 158.72 83.95 92.59 245.17 346.18 224.56 179.91 107.61 85.50 59.56 160.27 101.23 96.93 2 462443 Transcript 0 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 4.27 0.00 2.20 0.00 0.00 0.00 0.00 0.00 3 452063 Transcript 0 3.63 3.09 11.32 18.15 0.00 8.23 8.74 9.73 15.39 18.59 19.69 0.00 0.00 20.31 23.49 7.95 28.24 15.96 8.66 2.75 13.90 0.00 7.51 4 233616 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 1.93 4.33 4.69 1.62 0.00 0.00 6.60 0.00 0.00 0.00 0.00 0.00 0.00 5 486036 Transcript 0 9.67 12.36 21.16 17.73 6.20 9.73 12.05 25.99 13.65 14.37 19.43 7.89 34.08 50.14 60.89 27.31 31.00 28.93 18.55 23.46 4.35 25.40 11.86 6 448666 Transcript 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.53 0.00 9.42 0.00 0.00 0.00 4.45 4.10 0.00 2.53 0.00 0.00 0.00 0.00 0.00 7 414701 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 409065 Transcript 0 0.00 0.00 0.00 1.40 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 9 462189 Transcript 0 11.01 5.90 6.49 1.36 2.68 1.83 5.56 2.25 2.10 4.70 3.09 11.69 2.35 9.91 8.41 5.05 0.33 4.99 1.27 2.98 8.59 1.88 2.94 10 489655 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 IG10 Intergenic 0 12.34 11.04 20.50 17.87 22.37 17.04 21.92 13.22 11.46 20.04 3.35 22.59 3.54 2.92 7.02 3.96 1.65 3.09 6.90 7.87 2.42 0.90 3.42 12 IG10_SR2 SilentIntergenicRegion 0 5.89 15.09 35.56 26.37 18.61 9.35 14.12 11.94 12.80 26.15 9.86 8.27 3.58 3.77 11.37 9.65 3.06 6.40 16.19 9.86 2.04 2.90 6.81 13 IG10_SR1 SilentIntergenicRegion 0 13.58 11.39 20.45 18.24 23.88 18.65 23.86 14.13 11.95 20.59 2.89 25.01 3.75 2.95 6.93 3.50 1.51 2.94 6.55 8.10 2.53 0.79 3.36 14 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.72 0.00 0.00 0.00 1.41 0.00 0.00 3.10 0.79 0.00 0.00 0.00 0.00 0.00 0.20 0.00 0.00 15 ER1b ExonRegion 0 0.00 0.00 0.00 0.68 0.00 1.38 4.96 0.00 0.00 1.15 4.83 0.00 0.00 3.25 5.80 0.00 1.65 0.00 0.00 0.00 4.41 0.00 0.00 16 ER1c ExonRegion 0 4.23 2.03 2.45 1.36 0.00 1.83 9.27 0.00 0.00 1.15 13.53 0.00 0.00 4.87 17.41 2.97 6.60 0.00 0.00 0.00 14.69 0.00 2.94 17 ER1d ExonRegion 0 7.41 4.58 4.44 1.36 1.67 7.56 11.42 0.00 0.00 3.73 18.12 0.00 0.00 13.81 23.94 13.00 17.74 0.00 2.79 0.00 21.76 2.34 5.51 18 ER1e ExonRegion 1 26.59 3.78 6.92 1.27 3.09 32.31 23.85 1.34 2.82 7.01 41.54 5.18 5.55 56.91 99.46 30.14 46.77 5.86 11.62 3.21 54.22 7.89 12.86 19 E1_Da KnownBoundary 0 13.93 0.00 8.22 5.09 11.46 13.69 15.59 2.14 8.68 11.34 27.32 0.00 0.00 17.66 37.09 46.83 43.20 15.71 9.41 0.00 44.36 14.08 20.74 20 E1a_E1f KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.53 0.00 9.42 0.00 0.00 0.00 4.45 4.10 0.00 2.53 0.00 0.00 0.00 0.00 0.00 21 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E1a_E3c KnownJunction 0 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 4.27 0.00 2.20 0.00 0.00 0.00 0.00 0.00 23 ER1f ExonRegion 0 4.28 1.99 26.09 7.56 4.08 16.09 6.07 8.95 12.94 27.02 42.94 7.98 5.41 82.52 116.12 62.31 55.76 34.32 17.20 18.25 66.85 13.82 25.72 24 E1_Af KnownBoundary 0 10.30 5.92 55.29 25.97 8.66 55.03 15.59 13.68 30.41 57.46 41.59 21.31 18.83 119.78 143.64 49.56 75.74 54.97 29.55 41.29 83.52 20.21 31.67 25 ER1g ExonRegion 1 38.84 15.67 64.53 24.07 13.03 35.45 35.63 30.49 40.15 56.83 115.51 23.98 33.14 193.95 249.00 107.75 119.96 89.44 37.14 46.32 138.03 35.15 43.86 26 E1b_E2a KnownJunction 0 23.41 15.52 32.41 24.67 12.31 7.61 27.07 17.33 34.55 36.99 136.46 44.86 39.12 189.36 167.25 94.08 116.41 58.45 26.64 34.13 111.14 17.82 60.27 27 E1b_E3c KnownJunction 0 3.63 3.09 11.32 18.15 0.00 8.23 8.74 9.73 15.39 18.59 19.69 0.00 0.00 20.31 23.49 7.95 28.24 15.96 8.66 2.75 13.90 0.00 7.51 28 I1 Intron 0 12.48 3.00 12.38 7.18 4.73 7.57 2.73 6.07 4.34 11.08 13.68 10.14 8.46 32.67 31.39 20.15 12.65 26.00 13.15 8.15 10.38 9.24 6.06 29 I1_AR1 ActiveIntronRegion 0 12.61 3.03 12.53 7.27 4.79 7.66 2.76 6.15 4.39 11.21 13.84 10.25 8.53 33.02 31.74 20.39 12.80 26.29 13.30 8.25 10.50 9.33 6.13 30 E2_Aa NovelBoundary 0 20.15 11.58 27.32 18.58 8.40 16.18 12.23 19.47 17.91 33.36 27.69 0.00 26.78 22.07 28.56 22.64 17.67 36.64 22.40 14.70 18.04 5.02 24.16 31 ER2a ExonRegion 0 42.55 32.50 73.47 50.98 40.61 76.52 53.87 52.45 56.60 82.20 135.41 44.25 35.33 246.06 274.97 189.16 163.40 83.70 67.43 64.33 155.06 81.25 80.39 32 E2_Da KnownBoundary 0 14.15 25.06 52.87 42.35 16.64 13.80 24.20 49.82 31.92 28.74 37.38 32.56 32.14 55.68 97.53 55.71 55.35 44.48 25.32 38.09 6.18 21.06 16.73 33 E2a_E3c KnownJunction 1 52.90 14.01 61.20 61.23 30.48 56.44 31.58 55.08 61.23 110.05 171.31 67.37 19.80 254.58 306.57 254.21 181.77 87.26 91.20 55.48 212.33 151.74 145.12 34 ER2b ExonRegion 0 9.67 12.36 21.16 17.73 6.20 9.73 12.05 25.99 13.65 14.37 19.43 7.89 34.08 50.14 60.89 27.31 31.00 28.93 18.55 23.46 4.35 25.40 11.86 35 E2_Db NovelBoundary 0 7.41 29.21 72.06 51.18 23.77 35.26 13.43 41.16 39.24 36.08 30.17 28.96 6.82 38.38 53.77 49.99 42.08 26.20 29.93 21.48 25.64 23.33 15.28 36 E3_Aa NovelBoundary 0 89.87 26.77 11.21 7.52 8.49 31.06 32.02 17.42 7.03 6.53 21.22 32.41 28.41 31.49 13.47 37.77 31.42 2.24 28.33 6.20 21.87 8.70 19.72 37 E3_Ab NovelBoundary 1 117.50 46.44 56.33 24.54 32.34 43.78 96.50 29.66 25.26 33.66 64.91 0.00 70.45 38.08 44.50 81.18 72.28 19.81 14.02 33.36 27.61 16.47 19.55 38 ER3a ExonRegion 0 11.01 5.90 6.49 1.36 2.68 1.83 5.56 2.25 2.10 4.70 3.09 11.69 2.35 9.91 8.41 5.05 0.33 4.99 1.27 2.98 8.59 1.88 2.94 39 ER3b ExonRegion 1 76.78 27.25 65.01 47.96 37.69 37.07 37.72 41.50 37.18 42.90 50.29 72.01 81.97 67.76 64.61 87.40 37.09 44.48 40.79 33.33 21.73 30.89 27.66 40 E3_Ac KnownBoundary 0 61.12 24.34 84.30 53.34 17.74 70.30 61.21 36.68 34.66 35.91 56.01 60.92 78.73 73.58 52.54 39.31 48.81 67.40 60.52 42.95 12.48 39.56 34.49 41 E3a_E4a KnownJunction 0 0.00 0.00 0.00 1.40 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 42 ER3c ExonRegion 0 84.31 37.96 148.07 125.84 52.62 129.28 85.40 92.47 96.96 158.27 229.05 152.97 132.10 343.77 369.43 291.27 254.17 158.91 150.24 113.47 231.39 165.64 166.41 43 ER3d ExonRegion 0 160.93 59.03 164.73 111.20 70.05 111.14 96.98 84.47 103.86 152.61 204.34 169.92 132.58 344.72 393.59 311.76 252.83 133.08 142.64 87.97 234.49 133.61 126.07 44 E3_Db NovelBoundary 0 15.78 9.54 30.22 28.37 0.00 2.27 6.49 7.23 16.52 4.27 20.37 19.06 26.78 5.36 0.00 8.37 9.16 3.90 9.51 28.95 0.00 16.47 3.76 45 E3b_E4a KnownJunction 0 146.69 55.65 176.10 84.01 50.76 91.25 97.60 64.65 75.43 133.69 150.09 94.53 78.24 255.17 396.69 244.64 194.02 76.19 138.73 45.64 202.07 161.96 96.89 46 E3b_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 I3 Intron 0 14.03 14.06 31.57 22.82 3.08 13.21 11.83 6.68 14.85 10.83 16.71 21.65 11.61 3.63 7.43 16.27 6.66 4.51 11.01 17.17 6.98 25.81 1.69 48 I3_AR1 ActiveIntronRegion 0 14.19 14.22 31.93 23.07 3.12 13.35 11.96 6.76 15.02 10.96 16.90 21.87 11.71 3.68 7.51 16.46 6.73 4.55 11.14 17.36 7.06 26.11 1.71 49 E4_Aa NovelBoundary 1 32.45 49.99 19.72 31.40 23.68 22.54 16.03 6.04 14.87 13.14 14.48 25.51 68.99 11.71 4.45 11.62 0.00 11.07 12.05 29.53 5.62 34.47 7.00 50 ER4a ExonRegion 0 128.31 28.60 153.02 77.17 58.53 105.67 98.55 63.95 64.15 113.54 152.58 95.52 93.80 296.20 331.11 236.66 228.79 73.33 96.95 57.31 215.83 145.59 92.14 51 ER4b ExonRegion 0 117.53 55.51 171.71 116.81 80.16 145.89 116.52 84.46 71.54 152.19 164.85 109.46 102.81 335.07 353.70 324.58 247.00 120.52 87.29 81.53 195.56 134.04 112.84 52 E4_Ab KnownBoundary 0 198.04 56.96 230.18 119.43 127.25 142.76 135.18 96.40 84.23 167.27 195.21 93.78 67.04 311.38 387.79 277.11 285.83 83.94 109.46 110.38 172.05 153.57 130.26 53 ER4c ExonRegion 0 225.09 74.78 223.78 121.91 137.87 171.83 139.05 106.95 115.67 189.01 245.28 129.34 99.31 378.46 396.17 332.43 295.84 115.44 89.35 97.34 191.67 170.02 119.52 54 E4_Db KnownBoundary 1 326.35 110.90 107.80 67.49 177.67 149.86 142.29 63.34 87.88 105.49 219.53 151.25 55.52 406.21 333.89 346.75 303.04 72.79 96.10 87.95 189.59 166.37 116.78 55 E4_Dc KnownBoundary 0 264.05 74.86 150.65 112.71 105.18 137.36 139.60 88.35 75.69 122.17 183.78 95.28 106.65 293.49 334.38 246.17 180.08 125.19 94.87 45.45 188.54 143.47 73.84 56 ER4d ExonRegion 0 278.60 101.46 205.54 134.57 152.24 165.72 163.96 113.62 120.72 173.73 274.47 168.39 117.25 424.49 400.98 376.68 305.07 145.49 106.96 86.00 249.02 191.46 117.00 57 ER4e ExonRegion 0 199.57 63.33 260.51 148.92 79.48 146.49 98.49 120.46 104.14 191.51 247.83 123.74 164.95 370.53 500.97 355.34 273.06 178.12 125.06 79.85 237.96 158.99 164.17 58 E4_Dd KnownBoundary 0 164.55 50.65 269.51 142.91 60.95 154.57 85.28 114.51 93.98 165.12 179.41 110.74 160.54 378.48 464.31 303.51 207.85 171.37 98.45 60.34 205.97 92.65 105.17 59 ER4f ExonRegion 0 117.19 32.30 190.26 108.43 58.37 88.50 55.27 82.23 64.10 128.88 176.04 86.38 90.66 246.52 447.45 228.67 190.43 110.69 100.23 62.62 172.42 114.47 101.76 60 ER4g ExonRegion 0 12.70 6.10 4.90 4.09 8.03 1.83 3.97 3.46 2.47 6.88 9.66 17.32 4.69 11.37 8.70 8.92 13.20 5.54 0.00 4.26 2.20 4.17 0.00 61 ER4h ExonRegion 0 4.04 3.70 1.89 0.99 2.92 1.67 0.84 1.73 0.79 4.48 2.99 9.84 4.69 5.02 3.69 1.62 12.30 2.69 0.00 1.74 1.00 1.89 0.00 62 ER4i ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 1.93 4.33 4.69 1.62 0.00 0.00 6.60 0.00 0.00 0.00 0.00 0.00 0.00