Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DGUOK Gene 0 235.25 349.56 368.36 295.58 193.12 246.70 216.36 190.87 122.58 208.36 253.52 118.45 102.59 263.07 285.81 289.72 229.55 319.37 279.92 230.08 156.59 167.39 128.15 2 348222 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 264093 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 418996 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 356837 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 347161 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 448982 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 440532 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 462551 Transcript 1 17.20 12.59 6.21 16.06 12.59 4.73 21.18 7.60 19.49 20.88 16.40 26.48 35.60 16.60 8.41 13.26 12.74 4.74 3.27 16.91 9.27 9.67 0.30 10 489796 Transcript 0 0.00 3.35 0.00 2.76 0.00 11.19 0.00 2.01 0.00 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 0.00 0.00 11 462685 Transcript 0 3.68 4.91 14.79 12.95 2.04 1.90 7.59 12.52 7.69 3.82 4.50 10.94 4.13 7.64 5.28 22.01 8.76 15.85 25.06 13.08 3.49 7.07 4.18 12 493055 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 ER1a ExonRegion 0 23.32 29.00 5.81 5.15 4.87 24.72 11.20 1.42 1.93 3.21 9.70 0.00 0.00 8.09 10.91 10.46 10.10 20.66 9.43 7.87 6.52 9.00 12.80 14 E1_Ab KnownBoundary 0 43.93 40.58 8.52 8.02 7.98 34.07 20.71 2.55 1.79 5.02 11.32 0.00 0.00 12.01 4.45 11.71 8.60 24.83 18.45 5.75 12.42 16.41 29.96 15 E1_Ac KnownBoundary 0 7.56 10.06 0.00 4.13 0.00 2.90 4.42 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 3.26 0.00 0.00 0.00 16 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E1_Ae KnownBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E1_Af KnownBoundary 0 3.78 0.00 3.61 0.00 8.66 5.74 0.00 0.00 1.71 0.00 8.05 0.00 0.00 3.00 0.00 0.00 4.68 12.48 0.00 6.52 3.15 0.00 4.35 19 ER1b ExonRegion 1 92.60 146.76 29.10 21.69 44.37 146.55 67.52 10.37 12.66 20.17 58.63 0.00 0.00 77.69 68.42 69.84 59.42 85.15 41.68 38.83 48.30 46.18 69.26 20 E1_Ag KnownBoundary 1 939.20 1049.29 171.19 167.28 542.36 1145.93 897.83 85.97 82.00 106.35 308.87 0.00 12.99 566.02 394.09 716.82 396.54 497.73 454.22 253.62 282.75 236.85 462.50 21 ER1c ExonRegion 1 237.05 381.64 88.64 55.42 143.60 392.13 230.59 34.57 34.17 43.20 141.10 0.00 0.00 216.55 197.77 231.83 168.35 190.32 126.88 87.59 137.36 121.89 181.09 22 ER1d ExonRegion 1 270.91 418.92 101.71 62.69 168.57 434.61 272.74 36.30 39.52 47.02 160.43 0.00 0.00 258.23 214.69 267.49 184.85 210.64 146.53 97.87 152.06 129.18 196.76 23 ER1e ExonRegion 1 340.76 460.27 106.20 69.96 194.44 487.18 320.40 41.48 41.58 50.85 173.32 0.00 1.56 306.42 247.57 323.96 202.45 248.21 186.87 113.47 163.07 147.93 228.08 24 ER1f ExonRegion 1 631.68 747.06 153.39 141.12 375.58 875.39 638.27 67.72 78.37 97.38 264.98 0.00 8.10 548.66 457.34 586.32 352.30 481.25 392.67 209.48 241.61 222.18 380.43 25 ER1g ExonRegion 1 424.64 542.73 278.99 187.02 281.46 545.06 431.90 135.36 95.64 178.70 278.55 32.41 25.34 240.36 276.16 419.32 317.16 521.73 360.17 197.46 253.98 171.50 259.59 26 E1a_E2a KnownJunction 0 3.78 0.00 18.07 5.13 0.00 0.00 10.47 6.70 6.16 5.96 10.00 0.00 12.17 2.47 17.80 3.67 9.16 4.31 0.00 15.15 8.90 2.51 0.00 27 E1a_E3a KnownJunction 1 13.56 18.09 61.09 54.17 7.64 13.97 18.59 60.71 26.30 67.56 277.49 0.00 25.49 106.48 91.72 61.78 255.82 57.66 16.66 80.22 123.18 29.94 43.19 28 E1a_E4a KnownJunction 1 50.68 71.90 223.82 105.91 19.02 35.04 15.32 78.41 61.05 139.36 272.12 18.61 25.65 101.65 156.38 39.99 297.24 91.78 71.44 196.29 242.85 66.62 39.27 29 E1a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.55 0.00 0.00 0.00 0.00 0.00 0.00 30 E1a_E6a NovelJunction 0 0.00 0.00 2.96 3.00 0.00 0.00 0.00 2.09 0.00 3.01 7.79 0.00 0.00 0.00 4.45 0.00 13.28 0.00 0.00 3.26 24.83 3.12 0.00 31 E1a_E7a NovelJunction 1 0.00 9.27 37.64 29.93 0.00 0.00 0.00 12.45 19.33 33.55 78.34 12.60 0.00 18.19 24.11 4.02 58.16 35.36 34.54 9.14 81.98 56.09 15.28 32 ER2a ExonRegion 0 7.30 9.04 20.73 17.49 0.00 3.51 31.18 16.00 12.04 7.44 13.57 13.08 11.48 8.54 12.53 35.73 16.01 11.87 26.30 18.83 10.50 7.49 5.81 33 E2_Da KnownBoundary 0 14.15 18.29 31.43 34.29 0.00 8.69 64.12 32.41 16.23 11.17 10.27 23.56 13.31 13.36 23.98 71.09 38.80 24.71 53.37 19.49 7.91 19.72 7.34 34 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER2b ExonRegion 1 7.54 8.03 21.37 20.37 1.78 2.96 22.78 17.59 13.71 5.53 6.20 26.53 12.39 12.91 11.38 45.27 17.86 21.18 39.78 18.33 4.46 15.44 5.12 36 E2b_E4a KnownJunction 0 3.48 6.71 23.00 18.48 4.33 0.00 0.00 16.35 9.35 4.27 4.84 6.30 0.00 7.42 4.45 16.41 4.77 26.36 35.39 20.90 5.99 5.76 7.43 37 I2_SR1 SilentIntronRegion 0 8.56 9.27 9.76 11.89 3.89 0.04 9.90 5.95 9.06 10.60 0.00 9.36 24.38 0.06 7.93 2.97 18.42 3.87 1.78 20.04 4.38 1.28 7.00 38 ER3a ExonRegion 1 52.09 54.73 97.65 69.54 31.64 33.12 39.80 67.56 28.16 64.70 145.00 25.90 27.27 212.92 183.57 232.19 145.09 203.58 122.20 90.40 71.28 72.68 130.69 39 E3a_E4a KnownJunction 0 44.30 68.61 92.19 64.36 71.65 97.84 53.13 67.40 24.68 46.79 97.45 49.37 22.56 151.04 140.92 99.38 56.47 113.46 48.28 59.12 64.99 50.70 46.27 40 ER4a ExonRegion 1 124.87 110.83 299.60 200.34 94.99 130.20 70.17 169.39 102.51 195.55 390.45 64.94 58.63 276.10 287.22 199.13 343.29 281.78 164.05 272.34 329.45 135.43 96.91 41 ER4b ExonRegion 0 239.89 375.09 525.27 417.12 285.54 420.50 310.42 277.52 167.23 284.15 386.04 116.76 109.79 442.07 454.86 549.24 344.87 630.79 481.59 372.01 261.44 269.19 250.47 42 E4_Da KnownBoundary 0 34.52 54.14 5.80 30.43 27.67 43.16 58.12 15.98 28.07 26.41 14.42 25.21 33.60 2.24 31.65 33.15 52.45 24.08 7.81 20.52 11.31 14.51 37.05 43 E4a_E5a KnownJunction 0 338.58 768.35 496.67 312.25 371.56 914.76 806.99 251.04 173.06 286.99 309.66 91.53 82.62 327.21 246.62 217.55 289.11 279.73 235.30 393.03 157.22 128.59 92.70 44 E4a_E5b KnownJunction 0 0.00 3.35 0.00 2.76 0.00 11.19 0.00 2.01 0.00 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 0.00 0.00 45 E4a_E5c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.73 0.00 3.61 0.00 1.67 2.47 0.00 0.00 2.59 0.00 4.36 3.65 0.00 0.00 0.00 0.00 0.00 0.00 46 E4a_E7a KnownJunction 1 50.16 50.39 102.45 103.18 95.76 85.06 126.44 63.95 23.03 49.59 154.25 118.09 107.79 207.14 257.37 285.57 91.54 59.53 151.82 28.76 79.82 294.04 142.47 47 ER4c ExonRegion 0 23.81 31.39 9.59 26.39 27.87 15.97 42.03 12.91 24.88 29.25 12.95 21.15 22.78 17.50 15.71 30.11 27.15 24.13 8.39 17.69 13.64 10.49 17.18 48 E4_Db KnownBoundary 0 21.93 26.77 16.32 31.80 31.49 22.26 44.12 16.18 33.25 45.67 17.58 50.72 27.27 17.54 27.20 19.05 16.36 13.64 13.37 28.83 7.91 6.25 3.33 49 ER4d ExonRegion 1 17.20 12.59 6.21 16.06 12.59 4.73 21.18 7.60 19.49 20.88 16.40 26.48 35.60 16.60 8.41 13.26 12.74 4.74 3.27 16.91 9.27 9.67 0.30 50 E4_Dc NovelBoundary 1 16.67 17.37 24.81 36.69 18.42 23.51 33.03 33.11 41.64 29.33 4.63 29.71 53.08 33.26 43.39 27.77 17.20 18.82 11.86 17.00 0.00 18.13 15.37 51 I4 Intron 0 16.84 23.23 9.69 22.79 29.20 15.34 37.68 12.87 17.27 23.36 16.96 35.28 28.67 22.15 14.05 33.36 23.91 17.05 13.00 17.80 12.58 8.93 20.96 52 I4_AR1 ActiveIntronRegion 0 16.90 23.32 9.73 22.88 29.32 15.40 37.83 12.93 17.34 23.45 17.02 35.42 28.77 22.24 14.10 33.49 24.01 17.12 13.05 17.87 12.63 8.97 21.05 53 Ix Intron 0 30.05 20.49 15.68 31.62 33.20 22.98 41.23 24.16 19.19 26.41 18.91 50.44 55.27 27.07 25.26 42.70 36.10 22.13 18.20 24.47 15.34 13.33 21.89 54 Ix_AR1 ActiveIntronRegion 0 22.90 30.62 18.30 43.22 45.52 31.16 58.33 27.86 22.73 41.12 23.17 82.35 90.60 26.20 22.79 48.69 43.19 18.71 15.42 35.87 18.08 26.43 11.60 55 Ix_SR1 SilentIntronRegion 0 30.89 19.37 15.89 31.23 32.15 21.99 39.50 24.53 19.40 25.43 18.80 47.64 51.83 27.51 25.75 42.84 36.07 23.36 18.93 23.72 15.28 11.91 23.25 56 Ix_AR2 ActiveIntronRegion 0 33.59 15.30 0.00 0.00 17.81 21.46 27.61 0.03 0.00 0.00 6.46 11.92 22.53 18.53 21.21 17.35 11.09 0.00 7.99 3.56 7.37 5.23 22.10 57 E5_Aa NovelBoundary 0 125.06 27.56 25.25 18.18 32.94 30.04 35.73 14.50 15.34 15.12 28.27 30.31 21.26 23.90 25.22 41.70 40.11 20.69 32.57 22.82 24.46 8.57 44.13 58 E5_Ab NovelBoundary 0 337.54 634.10 179.95 123.13 237.27 451.16 514.41 103.63 86.14 120.13 183.15 99.03 107.46 214.79 177.02 175.34 197.01 151.72 200.48 231.51 91.18 88.73 72.90 59 ER5a ExonRegion 0 302.41 771.92 468.45 308.33 335.88 728.34 650.38 247.27 169.50 275.93 311.42 106.20 106.77 331.70 256.33 229.38 291.84 326.73 278.06 346.81 154.91 128.08 83.95 60 E5_Ac KnownBoundary 0 470.75 987.65 441.91 344.25 259.42 446.84 478.77 270.43 160.15 265.99 283.86 129.64 108.27 427.51 268.25 248.74 293.50 327.98 314.74 380.56 172.67 79.60 71.79 61 ER5b ExonRegion 0 404.82 956.80 478.37 341.19 292.69 608.54 597.21 285.46 185.12 294.09 329.63 143.70 124.11 393.41 270.15 272.29 323.23 383.48 342.92 379.62 176.55 116.28 83.58 62 ER5c ExonRegion 0 422.19 825.85 569.80 424.32 226.19 320.46 294.20 331.57 202.38 316.96 339.44 143.24 98.98 360.49 301.76 300.52 283.12 445.96 313.71 382.98 166.89 126.30 85.83 63 E5_Da NovelBoundary 1 6.52 8.88 24.25 25.94 16.47 11.02 20.05 23.25 19.73 23.32 7.42 17.86 52.43 14.30 5.69 26.92 17.48 24.33 9.22 27.93 20.14 8.51 26.72 64 E5a_E6a KnownJunction 0 233.23 552.20 478.58 350.24 272.58 322.26 375.25 250.67 151.39 219.11 254.59 134.74 44.80 245.63 219.42 201.74 251.52 274.42 215.82 370.85 141.41 88.18 85.02 65 E5a_E7a KnownJunction 1 38.53 63.67 111.68 112.97 40.15 63.20 45.09 103.10 67.30 55.71 22.27 24.76 26.78 38.44 68.36 68.96 19.73 72.00 171.02 39.82 11.74 11.02 4.27 66 Ix_AR1 ActiveIntronRegion 0 15.79 21.76 13.81 31.16 42.79 14.65 47.75 16.69 19.40 14.96 6.40 14.27 20.42 22.34 13.22 27.64 18.50 17.18 10.57 24.25 13.78 9.15 20.87 67 Ix_AR2 ActiveIntronRegion 0 8.14 6.97 7.06 18.93 17.15 18.36 23.81 11.05 11.74 13.15 4.97 21.38 31.33 13.92 8.39 16.28 19.02 7.02 6.84 11.10 4.87 6.99 10.67 68 Ix_SR3 SilentIntronRegion 0 24.05 25.49 18.91 36.05 36.66 23.23 37.24 21.52 15.80 22.70 9.32 20.67 21.48 18.50 20.93 21.94 12.77 17.53 10.56 19.87 8.78 12.12 13.28 69 ER6a ExonRegion 0 181.55 400.21 543.58 396.24 302.43 245.43 199.93 268.98 161.89 337.58 283.90 200.50 154.29 335.81 344.32 316.12 252.77 488.68 315.96 398.27 181.83 144.09 106.33 70 E6a_E7a KnownJunction 0 123.80 364.15 745.09 534.93 228.44 111.24 143.31 320.95 155.53 391.00 289.23 215.17 181.64 401.56 486.43 463.30 237.21 534.67 513.71 463.08 158.15 223.93 122.15 71 Ix Intron 0 68.79 29.57 35.40 47.87 46.86 23.84 35.58 21.85 22.51 22.78 12.14 15.96 17.78 14.61 22.39 22.26 15.63 12.36 10.88 12.66 8.98 16.98 11.64 72 Ix_AR1 ActiveIntronRegion 0 81.01 31.29 38.63 52.88 52.54 24.62 37.80 23.47 24.39 23.34 12.87 18.68 20.87 14.21 20.56 21.52 16.28 13.09 10.25 13.74 9.29 18.42 11.79 73 E7_Aa NovelBoundary 1 116.24 58.34 133.05 104.85 83.96 50.20 76.45 36.23 28.36 42.55 17.43 55.52 77.27 21.84 85.42 45.63 36.00 23.21 56.38 27.93 26.69 46.35 20.32 74 ER7a ExonRegion 0 215.82 356.87 1009.12 907.16 288.87 272.69 307.03 496.93 308.41 533.09 673.91 286.87 223.25 586.47 733.00 504.79 519.53 474.54 657.30 500.36 358.41 414.97 204.60 75 E7a_E8a KnownJunction 0 324.35 375.79 897.10 702.04 359.00 315.61 301.32 445.94 305.61 484.91 487.28 322.61 217.36 524.05 734.41 350.59 514.63 380.25 400.39 422.49 324.52 341.32 149.98 76 Ix_AR1 ActiveIntronRegion 0 53.21 27.78 25.99 42.11 42.73 17.60 30.20 19.39 9.87 17.93 3.87 5.79 19.22 7.34 15.03 11.89 12.52 7.35 1.84 4.23 7.90 4.58 7.05 77 ER8a ExonRegion 0 524.52 566.21 897.89 732.32 360.21 388.65 314.20 473.49 292.61 480.34 485.50 337.75 240.62 451.88 585.61 532.27 408.64 515.50 517.08 440.64 252.48 492.95 192.11 78 E8_Da KnownBoundary 0 1952.94 1860.79 1199.54 1112.31 985.65 865.24 735.31 537.86 342.42 540.09 732.24 475.05 564.41 597.62 997.47 862.85 660.87 605.51 1159.09 567.27 311.05 882.68 384.48 79 ER8b ExonRegion 0 434.88 508.48 406.03 345.34 266.90 188.86 206.82 180.74 130.42 203.97 264.32 231.76 253.29 249.30 344.68 259.97 233.97 168.24 320.85 186.63 150.74 231.97 102.82 80 ER8c ExonRegion 0 13.51 40.83 14.80 7.97 19.35 18.20 12.83 6.78 3.61 14.12 11.30 19.32 5.41 22.24 45.75 16.00 11.17 8.39 12.50 16.53 4.41 2.24 4.52 81 ER8d ExonRegion 0 0.00 4.07 1.84 0.00 0.00 3.67 1.32 1.73 0.00 1.15 3.87 0.00 0.00 1.62 2.90 0.00 1.65 0.92 0.00 0.00 2.20 0.00 0.00