Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CEP68 Gene 0 57.07 173.65 123.30 111.78 91.44 161.56 107.69 95.81 103.92 100.75 18.02 32.01 37.33 39.28 23.67 39.02 29.66 121.06 79.85 121.71 36.80 53.45 34.33 2 475851 Transcript 0 3.63 0.00 0.00 0.97 0.00 0.00 0.00 2.36 3.54 0.55 0.00 0.00 0.00 0.00 0.83 0.00 0.00 0.00 0.00 1.60 0.00 0.00 0.00 3 377990 Transcript 0 25.24 86.52 91.39 78.74 46.40 144.03 99.53 83.40 115.60 101.62 31.84 21.19 27.79 63.40 20.75 50.46 23.71 215.15 124.39 138.34 56.88 68.01 44.34 4 260569 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 497039 Transcript 0 5.59 6.89 5.90 6.24 7.69 24.07 15.36 4.33 6.19 5.09 1.17 3.08 4.24 2.75 1.85 5.24 4.93 8.29 6.02 12.04 4.58 4.74 7.23 6 IG48_AR1 ActiveIntergenicRegion 0 19.16 0.61 2.20 1.23 12.10 1.66 0.40 0.00 0.00 0.00 0.00 2.00 1.17 8.48 22.97 26.91 2.99 0.83 0.00 0.64 0.67 0.63 0.00 7 IG48_AR2 ActiveIntergenicRegion 0 34.77 19.17 49.72 20.64 16.05 35.89 11.35 23.95 8.65 11.47 14.36 16.70 52.93 31.55 32.33 46.70 15.09 25.87 15.93 12.16 0.00 0.00 5.87 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.99 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 7.72 15.70 4.31 3.33 14.13 47.70 20.69 12.25 11.79 9.92 8.44 0.00 0.50 6.32 10.33 9.72 10.15 41.70 20.11 35.12 20.80 14.20 18.03 10 E1_Ac KnownBoundary 0 30.67 57.82 23.18 21.04 57.72 179.73 95.35 33.27 49.62 42.71 22.58 5.70 11.53 23.31 14.09 47.85 29.64 150.48 80.10 137.61 71.29 52.66 74.10 11 ER1c ExonRegion 0 22.78 41.46 26.54 15.96 30.93 133.59 62.54 34.72 37.05 49.14 16.38 0.00 3.18 15.97 17.70 45.44 17.79 131.97 70.24 81.72 35.15 27.79 50.27 12 E1a_E2a NovelJunction 0 0.00 10.00 3.99 4.53 8.40 11.07 10.60 13.06 11.00 16.90 2.68 0.00 6.82 7.42 4.45 3.93 4.77 30.22 13.74 25.12 8.53 0.00 6.91 13 E1a_E3b KnownJunction 0 7.26 0.00 0.00 1.93 0.00 0.00 0.00 3.74 7.09 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 0.00 0.00 0.00 14 E1b_E2a KnownJunction 0 12.22 18.29 16.17 8.16 4.33 10.68 12.41 12.94 6.54 16.49 2.05 0.00 6.82 0.00 0.00 12.22 0.00 37.72 7.53 15.08 2.78 0.00 0.00 15 ER1d ExonRegion 0 10.58 12.20 23.28 9.54 0.00 6.42 10.92 22.04 16.06 32.69 2.42 0.00 9.38 0.00 5.80 5.94 6.60 74.83 4.78 15.96 2.20 2.08 0.00 16 I1 Intron 0 9.64 10.54 13.91 13.92 10.01 8.44 18.80 10.19 9.09 5.60 0.82 3.22 3.94 1.75 3.64 4.87 5.12 16.71 17.60 11.32 3.90 2.57 8.92 17 I1_SR1 SilentIntronRegion 0 7.96 7.84 14.52 11.94 10.64 9.41 18.71 8.22 7.64 5.73 1.09 3.38 3.49 1.27 3.28 3.00 3.14 10.48 19.31 10.83 2.82 2.36 8.92 18 I1_AR1 ActiveIntronRegion 0 9.13 14.61 7.55 4.41 5.91 6.69 22.87 6.01 4.83 2.87 0.00 4.33 3.97 2.42 2.70 2.11 6.33 3.51 8.56 4.01 1.26 2.40 2.76 19 I1_AR2 ActiveIntronRegion 0 12.81 11.84 16.86 14.05 9.85 8.54 25.45 7.96 9.89 4.33 0.73 2.07 4.51 0.69 4.65 4.44 5.10 19.29 20.28 8.45 4.65 2.07 9.46 20 I1_SR4 SilentIntronRegion 0 21.96 11.69 12.56 25.04 10.03 4.13 23.67 5.19 15.59 6.45 0.00 0.00 8.79 2.64 5.80 3.72 2.48 21.94 17.92 9.31 2.20 5.99 8.81 21 I1_AR3 ActiveIntronRegion 0 14.53 12.59 11.34 18.13 8.70 13.73 31.82 7.79 17.28 8.08 1.86 5.17 7.64 1.52 3.70 5.34 8.49 22.95 19.77 17.36 3.35 3.01 13.07 22 I1_SR5 SilentIntronRegion 0 12.52 18.79 17.43 17.55 14.24 10.24 23.80 16.73 15.20 8.63 1.04 4.00 7.30 1.41 3.85 8.16 4.00 23.02 23.48 16.79 4.54 4.62 6.08 23 I1_AR4 ActiveIntronRegion 0 17.60 19.39 11.63 14.80 15.91 11.84 23.85 10.99 8.86 6.93 0.30 8.92 10.76 0.97 1.86 7.01 3.35 8.58 11.26 11.56 1.70 2.69 6.67 24 I1_SR6 SilentIntronRegion 0 13.28 12.44 21.25 24.08 12.75 10.37 23.30 12.83 11.40 5.95 0.38 2.77 4.95 2.20 5.47 6.61 8.24 20.83 21.25 14.20 5.32 2.87 13.15 25 I1_AR5 ActiveIntronRegion 0 13.64 16.32 16.43 22.85 12.80 7.05 18.59 17.47 14.62 7.72 0.77 2.43 3.37 2.81 5.35 10.44 8.21 30.96 23.24 13.11 6.90 2.07 12.51 26 ER2a ExonRegion 0 10.28 26.15 48.93 27.41 16.53 60.53 31.68 41.49 55.10 71.58 27.37 8.62 7.33 37.92 21.96 38.90 24.15 160.58 73.87 92.73 63.54 35.80 41.70 27 E2a_E3b KnownJunction 0 28.67 33.61 64.46 36.39 8.32 67.80 27.78 49.58 78.73 102.45 43.17 25.21 13.64 66.81 36.34 45.37 20.38 229.44 53.46 156.72 82.53 45.62 28.51 28 I2_SR1 SilentIntronRegion 0 3.27 2.09 6.52 5.48 1.38 5.04 9.13 4.27 11.17 3.66 2.32 7.74 7.55 3.07 3.17 7.51 7.62 16.24 11.47 6.70 8.50 2.84 8.86 29 I2_SR2 SilentIntronRegion 0 3.49 3.32 5.62 6.33 2.20 7.03 12.69 6.61 5.24 6.07 1.10 7.23 2.24 1.60 4.96 7.04 8.36 13.78 9.12 13.19 9.05 2.10 8.16 30 I2_AR1 ActiveIntronRegion 0 2.12 5.08 7.15 5.22 5.35 11.00 9.05 13.83 6.18 8.03 5.80 0.00 0.00 0.00 0.00 11.89 3.30 9.24 12.74 29.43 5.14 4.17 9.30 31 E3_Aa NovelBoundary 0 19.93 8.22 18.07 17.08 4.16 2.90 30.69 14.33 11.55 7.44 4.90 0.00 0.00 4.47 14.09 21.19 17.86 19.73 0.00 23.33 6.24 7.96 22.71 32 ER3a ExonRegion 0 6.19 2.60 7.16 3.33 2.27 4.20 6.32 7.68 4.03 4.07 1.00 2.53 2.66 1.39 4.25 3.05 5.17 11.30 8.29 6.57 3.87 3.30 10.56 33 E3_Ab KnownBoundary 0 10.37 0.00 22.03 3.50 14.60 2.38 15.28 20.70 8.68 11.26 0.00 0.00 13.64 0.00 10.26 3.50 0.00 32.62 33.79 14.38 8.46 0.00 26.21 34 ER3b ExonRegion 0 21.44 34.85 84.95 43.15 26.11 94.78 44.22 87.18 101.19 100.81 39.50 20.55 23.41 84.48 34.32 59.24 50.85 260.27 111.54 166.64 85.22 63.84 66.94 35 E3_Da KnownBoundary 0 10.82 25.13 69.39 44.62 34.47 89.89 57.23 71.26 71.01 80.83 21.79 12.60 13.47 43.62 4.45 34.61 38.90 164.53 44.80 143.37 47.57 36.56 29.11 36 ER3c ExonRegion 0 18.88 53.96 81.48 54.08 31.98 118.67 54.99 75.84 101.77 97.20 29.45 13.98 30.19 64.98 27.46 61.14 40.35 290.17 121.36 144.07 81.06 67.12 52.35 37 E3_Db KnownBoundary 0 14.37 91.04 92.13 83.47 68.17 123.74 104.09 112.26 103.18 119.37 30.43 17.41 15.42 69.28 18.42 55.71 51.80 237.44 85.65 160.37 58.81 81.01 58.82 38 E3b_E3c KnownJunction 0 0.00 0.00 0.00 5.33 8.06 0.00 0.00 1.97 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 0.00 0.00 0.00 3.50 39 E3b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER3d ExonRegion 0 22.85 69.84 94.67 69.91 35.23 127.87 65.55 85.63 103.20 99.33 25.88 10.72 21.16 60.10 22.84 49.56 35.46 250.01 116.25 136.64 65.82 60.15 50.17 41 E3_Ac KnownBoundary 0 51.79 81.04 94.53 71.92 27.08 177.57 105.02 71.51 91.00 94.58 17.64 0.00 19.97 54.21 31.28 33.07 42.82 248.31 102.78 169.76 66.66 45.99 35.08 42 ER3e ExonRegion 0 36.69 75.52 78.54 58.65 45.38 168.08 80.83 65.43 90.46 97.58 19.75 18.76 26.04 64.47 20.37 32.41 48.55 198.61 101.73 131.47 62.90 51.83 36.28 43 E3_Dc NovelBoundary 0 6.67 9.47 18.89 6.83 0.00 20.56 16.25 9.61 12.79 8.92 0.00 30.31 0.00 0.00 0.00 11.02 0.00 25.12 8.66 16.49 3.15 10.90 23.22 44 E3c_E4a KnownJunction 0 0.00 0.00 5.91 2.63 0.00 5.79 1.94 0.00 2.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 3.20 3.09 0.00 0.00 45 E3c_E5a KnownJunction 1 27.63 103.21 88.11 87.57 57.56 160.19 133.50 81.16 128.01 103.90 37.80 31.66 34.41 66.69 18.67 51.35 11.97 180.28 132.52 140.04 47.94 75.87 38.50 46 E4_Aa NovelBoundary 0 5.93 5.79 30.99 18.78 38.62 14.59 48.53 19.55 11.40 7.58 2.16 0.00 26.62 4.77 4.45 11.19 31.04 7.25 17.60 20.84 2.53 8.94 11.95 47 ER4a ExonRegion 0 12.05 12.36 10.47 7.37 13.95 13.67 20.78 7.98 10.82 5.31 1.82 4.75 6.51 2.95 3.19 11.33 7.08 10.22 3.80 13.46 8.18 3.48 15.20 48 E4_Da NovelBoundary 0 25.26 18.48 17.47 11.95 14.01 4.83 20.09 16.02 17.36 9.27 2.68 17.86 6.49 2.35 8.90 12.30 4.77 20.60 13.08 17.32 5.00 0.00 27.66 49 E4a_E5a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 8.35 0.00 0.00 1.39 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.62 2.72 0.00 3.67 50 E5_Aa NovelBoundary 0 3.48 0.00 14.49 18.15 19.69 15.22 33.08 10.10 19.79 19.96 0.00 0.00 19.97 9.65 0.00 8.20 17.77 20.15 12.71 31.77 8.15 11.63 16.05 51 ER5a ExonRegion 0 37.70 93.13 78.27 86.13 38.79 123.15 98.94 83.06 112.08 114.84 23.02 39.95 46.94 53.13 28.40 53.02 52.92 200.40 113.02 139.66 57.37 65.28 40.75 52 E5_Da KnownBoundary 0 15.04 29.34 28.24 22.61 11.54 27.20 33.03 22.47 39.67 36.61 5.11 36.31 12.50 13.48 10.75 11.96 31.60 46.64 34.07 33.11 14.39 34.72 22.19 53 E5a_E6a KnownJunction 0 14.15 105.44 66.82 61.76 31.49 121.01 68.98 54.42 96.79 81.04 17.27 30.61 20.45 29.14 19.28 39.39 22.16 157.94 74.54 102.91 46.33 36.86 13.91 54 ER5b ExonRegion 0 15.32 23.03 11.86 18.81 21.87 112.39 63.12 8.34 18.09 18.49 4.20 11.20 16.30 12.18 3.66 17.05 17.33 24.51 24.01 46.38 9.64 21.67 10.46 55 E5_Db NovelBoundary 0 11.34 31.97 17.95 31.90 109.85 108.40 92.92 20.99 28.36 29.20 2.58 18.91 20.94 2.18 24.97 7.09 13.18 30.88 0.00 37.26 8.22 9.19 18.95 56 Ix_AR2 ActiveIntronRegion 0 23.49 21.06 20.25 33.64 24.04 25.35 31.88 27.36 19.92 17.03 3.21 6.70 13.12 9.52 6.37 14.33 11.14 27.74 19.84 30.72 10.08 7.91 12.90 57 E6_Aa NovelBoundary 1 50.68 28.35 21.29 52.34 37.61 131.91 52.07 29.90 21.18 28.42 4.32 0.00 45.94 28.96 8.90 26.23 20.29 21.93 25.04 52.60 2.35 11.45 27.66 58 ER6a ExonRegion 0 25.51 94.30 74.89 83.67 53.24 130.43 68.55 81.84 105.29 104.79 25.71 29.19 32.15 51.77 27.70 57.85 40.97 182.70 111.52 165.10 57.77 70.07 30.24 59 E6_Da NovelBoundary 1 24.08 13.09 12.86 16.61 11.38 22.60 10.78 36.31 33.22 14.02 0.00 0.00 40.09 6.65 16.94 22.90 25.71 38.39 21.93 24.22 5.07 5.39 20.83 60 E6a_E7a KnownJunction 0 19.26 109.91 70.28 62.90 48.13 90.69 66.20 79.64 94.30 84.19 9.48 27.61 20.45 44.97 20.77 44.86 25.90 157.98 69.18 112.81 65.30 55.05 18.01 61 E7_Aa NovelBoundary 0 10.59 19.40 25.63 26.60 21.99 42.08 22.57 32.24 20.43 8.30 2.58 0.00 12.17 9.18 4.45 15.64 7.57 19.07 13.08 30.55 5.75 5.27 16.56 62 ER7a ExonRegion 0 31.58 247.10 85.12 80.90 34.02 100.77 75.56 91.76 106.92 87.50 16.97 23.69 21.24 56.40 23.56 51.67 33.77 170.34 84.52 147.82 54.50 47.08 35.59 63 E7_Da NovelBoundary 0 14.00 14.54 24.72 24.44 7.89 9.60 40.14 28.63 14.76 4.70 2.05 0.00 13.47 7.36 0.00 31.36 4.02 32.67 3.48 15.60 8.34 5.27 31.84 64 E7a_E8a KnownJunction 0 39.71 378.29 67.18 85.47 44.48 140.54 67.83 86.71 95.25 76.21 14.90 37.81 21.43 52.45 24.11 37.85 48.25 130.41 77.27 141.38 44.36 64.91 24.50 65 Ix_SR1 SilentIntronRegion 0 6.09 10.08 10.46 17.66 6.34 12.29 18.72 15.98 7.37 9.87 0.98 6.46 7.62 1.43 5.84 15.08 11.87 35.14 9.14 24.36 5.46 6.39 10.80 66 E8_Aa NovelBoundary 0 24.45 48.28 7.33 24.41 23.68 2.44 31.80 6.90 6.31 14.42 0.00 18.91 0.00 0.00 0.00 12.48 0.00 17.74 0.00 35.60 3.15 4.78 8.19 67 ER8a ExonRegion 0 98.72 305.09 194.85 188.30 162.66 247.71 175.30 140.85 144.04 137.86 16.20 52.75 58.20 36.82 28.21 40.28 30.95 77.60 85.23 147.21 22.88 66.71 31.25