Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF512 Gene 0 192.65 286.55 227.31 280.84 291.87 378.43 258.43 194.75 156.90 266.39 142.15 121.09 117.68 107.26 92.80 115.00 99.05 179.42 171.42 164.98 70.84 60.05 60.13 2 416005 Transcript 0 2.52 9.12 11.65 6.88 1.95 22.35 17.22 8.73 5.90 5.14 1.21 0.00 0.00 0.49 0.00 0.00 0.00 2.10 0.00 12.57 1.10 0.21 0.29 3 379717 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 355467 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 494548 Transcript 1 9.78 63.80 77.44 89.93 111.71 782.67 287.85 33.89 19.36 41.31 16.27 24.61 58.60 7.71 5.19 46.83 34.03 54.26 61.18 19.43 28.36 5.39 103.63 6 461705 Transcript 0 11.36 24.37 22.66 24.58 24.58 29.85 53.89 19.39 17.16 33.44 20.06 7.24 8.10 12.83 9.45 24.79 22.45 69.27 32.28 37.06 17.61 4.84 24.43 7 488055 Transcript 0 15.73 6.26 11.24 24.08 28.13 21.82 24.28 13.83 12.56 13.95 13.70 23.56 12.00 13.01 5.52 15.12 10.12 6.10 9.24 12.56 3.68 9.25 8.53 8 ER1a ExonRegion 0 1.27 0.81 0.74 0.27 0.00 12.10 0.00 0.00 0.00 0.69 0.00 0.00 0.00 0.97 0.00 0.00 0.00 2.22 0.00 3.40 2.20 0.42 0.59 9 ER1b ExonRegion 0 5.44 11.48 3.76 5.94 3.63 28.03 4.26 0.00 0.79 2.05 3.73 0.00 1.68 3.71 0.00 3.82 0.00 3.83 1.82 7.45 6.30 3.87 2.94 10 ER1c ExonRegion 1 169.71 257.19 91.20 105.16 210.56 731.85 345.55 76.86 79.50 133.88 139.25 8.75 58.86 100.98 49.56 191.58 177.31 173.73 177.15 238.97 131.48 42.24 151.24 11 E1_Da NovelBoundary 0 2.82 22.23 36.63 31.53 10.61 45.37 17.36 15.73 18.92 41.99 4.63 0.00 0.00 2.53 14.22 29.82 3.83 20.48 71.53 34.96 10.93 19.78 30.82 12 E1a_E2b KnownJunction 0 59.94 101.63 78.09 62.83 64.18 282.00 145.56 67.03 94.53 155.13 37.17 18.01 0.00 16.89 10.38 41.01 57.41 140.53 49.41 111.86 30.83 10.96 31.07 13 E1a_E3a KnownJunction 1 9.78 63.80 77.44 89.93 111.71 782.67 287.85 33.89 19.36 41.31 16.27 24.61 58.60 7.71 5.19 46.83 34.03 54.26 61.18 19.43 28.36 5.39 103.63 14 E1a_E3b NovelJunction 0 3.56 0.00 6.39 21.64 20.03 156.33 68.45 6.16 4.98 11.90 2.11 7.65 7.95 4.65 0.00 11.02 0.00 11.52 12.80 2.43 4.88 2.88 0.00 15 E2_Aa NovelBoundary 1 0.00 5.92 30.34 42.82 6.96 20.10 39.39 32.20 18.23 60.33 21.95 0.00 6.82 24.13 14.83 99.12 8.04 126.14 217.42 81.17 28.54 24.13 157.92 16 ER2a ExonRegion 0 11.36 24.37 22.66 24.58 24.58 29.85 53.89 19.39 17.16 33.44 20.06 7.24 8.10 12.83 9.45 24.79 22.45 69.27 32.28 37.06 17.61 4.84 24.43 17 E2_Ab KnownBoundary 0 25.63 33.02 48.46 31.80 22.58 36.00 95.79 22.18 18.69 41.31 24.95 31.21 20.13 14.83 11.00 29.91 25.34 89.25 34.17 47.87 11.49 0.00 19.21 18 ER2b ExonRegion 0 28.65 96.24 76.04 61.12 63.53 201.46 121.78 63.77 80.60 152.72 70.92 53.75 46.58 40.55 31.91 35.61 63.00 172.76 58.27 118.19 43.39 6.32 34.33 19 E2_Da NovelBoundary 0 13.48 18.02 3.52 21.18 31.24 0.00 17.00 10.51 16.12 21.57 12.42 6.00 14.45 9.24 10.75 26.83 24.96 24.17 14.31 39.82 19.52 0.00 22.45 20 E2a_E3a KnownJunction 1 13.41 60.12 50.68 44.42 51.61 160.76 77.11 63.50 73.81 146.24 98.71 49.82 26.62 36.08 26.21 23.16 92.10 143.30 62.12 119.01 39.97 5.45 7.60 21 E2a_E3b KnownJunction 0 0.00 21.71 13.13 10.75 29.12 39.69 15.10 6.45 17.13 28.98 17.11 6.00 0.00 5.18 0.00 3.33 24.12 37.06 12.33 24.86 17.30 0.00 3.84 22 I2 Intron 0 12.59 12.72 14.08 24.86 22.70 17.09 35.01 15.77 17.72 19.10 7.23 18.13 23.65 5.11 7.99 10.88 13.62 9.23 9.81 20.85 5.04 5.45 10.24 23 I2_SR1 SilentIntronRegion 0 8.04 6.62 13.54 19.10 23.71 9.95 33.05 17.24 18.64 15.76 4.89 20.27 35.34 3.37 8.43 5.38 13.13 4.33 9.22 25.78 4.38 1.51 11.68 24 ER3a ExonRegion 0 24.87 116.42 106.91 126.75 128.44 702.34 274.72 95.50 96.03 198.41 140.62 72.52 105.53 64.15 30.46 72.82 143.59 184.31 111.49 139.36 76.58 17.71 86.63 25 ER3b ExonRegion 0 26.16 111.00 155.19 210.47 152.70 261.89 129.18 168.41 179.77 313.53 250.86 120.04 150.80 153.83 68.09 181.93 221.22 406.93 197.98 327.11 174.15 46.71 83.05 26 E3_Da KnownBoundary 1 39.49 132.34 248.93 382.74 123.26 154.00 140.66 218.80 255.52 348.24 190.47 109.09 237.48 232.45 79.12 318.89 206.83 754.20 339.49 314.03 116.51 110.47 135.64 27 ER3c ExonRegion 0 53.64 139.89 199.63 299.59 250.92 443.72 192.86 209.04 229.75 368.81 238.50 155.67 185.99 210.70 95.96 281.29 189.73 581.24 282.97 303.78 148.21 70.25 174.40 28 E3b_E4a KnownJunction 0 65.57 202.73 156.82 270.13 475.64 936.17 347.25 195.51 217.56 381.33 229.27 179.76 200.96 192.42 89.25 203.45 201.68 396.42 258.74 363.11 163.15 41.70 175.93 29 ER4a ExonRegion 0 42.22 165.38 144.44 198.74 153.49 640.32 335.61 165.21 204.03 309.38 165.65 136.51 124.68 177.32 74.95 150.34 144.79 325.11 175.46 255.85 138.86 45.32 67.15 30 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E4a_E6a KnownJunction 0 3.78 17.43 22.56 13.48 3.90 32.59 34.45 17.46 11.81 9.59 2.42 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 21.73 0.00 0.00 0.00 32 ER5a ExonRegion 1 112.35 239.04 160.65 190.43 124.90 404.61 166.74 170.40 209.59 328.97 174.33 159.88 213.56 183.08 69.60 140.43 131.45 334.64 204.85 239.21 127.71 54.47 70.44 33 E5a_E6a KnownJunction 1 130.10 231.67 151.62 224.85 207.30 210.39 157.97 164.21 183.24 285.57 223.06 204.52 396.89 195.83 83.19 149.62 147.45 365.70 182.41 257.07 137.76 66.56 78.79 34 ER6a ExonRegion 0 97.92 195.49 182.48 213.79 134.98 178.94 168.81 164.57 200.25 286.00 187.85 196.76 195.01 227.08 98.87 133.51 157.92 329.87 185.59 258.29 134.19 67.00 72.03 35 E6_Da KnownBoundary 0 90.53 207.86 222.97 250.48 132.77 204.54 221.03 176.86 220.37 298.01 174.78 177.96 99.18 273.35 145.25 128.09 153.81 311.44 181.75 279.06 139.62 55.91 83.40 36 ER6b ExonRegion 1 61.31 235.10 191.41 207.91 207.60 276.46 194.14 152.04 202.83 307.55 193.31 171.44 130.89 207.27 74.63 150.96 119.78 309.70 209.47 253.29 140.43 47.32 56.67 37 E6b_E7a KnownJunction 1 102.31 327.77 187.72 187.52 250.68 348.55 243.42 137.68 173.35 343.40 217.32 219.52 116.23 145.62 42.52 134.49 89.57 264.10 213.37 274.08 122.26 43.78 64.71 38 ER7a ExonRegion 1 46.61 109.25 134.75 147.43 53.85 95.91 60.72 114.46 116.51 225.40 122.44 92.21 90.78 102.75 34.82 76.56 92.24 220.43 97.65 151.97 78.47 32.67 45.13 39 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER8a ExonRegion 1 10.28 22.84 72.37 71.60 33.60 54.85 46.31 48.73 61.71 104.47 56.93 82.39 77.79 87.74 29.28 58.09 30.64 121.84 96.62 87.19 33.86 21.07 22.22 41 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER9a ExonRegion 0 14.64 99.86 6.91 7.08 43.45 107.40 80.97 4.13 4.04 6.97 0.84 10.13 6.23 2.92 1.24 9.18 0.00 19.86 7.13 4.53 0.00 2.22 5.72 43 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER10a ExonRegion 0 17.07 28.28 1.73 0.00 0.07 1.18 0.60 0.62 0.00 0.00 0.51 0.00 0.00 0.00 0.00 0.00 0.86 0.48 0.00 1.11 0.12 0.00 0.00 45 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER11a ExonRegion 0 82.30 119.92 1.66 1.50 6.43 53.85 40.69 0.00 0.00 0.46 0.00 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 1.47 47 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 ER12a ExonRegion 1 100.25 150.90 8.44 11.57 55.47 197.76 87.36 6.64 3.29 4.01 0.03 13.40 29.11 0.67 1.38 4.06 0.00 6.34 0.81 4.83 0.00 0.53 3.54 49 E12a_E13b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER13a ExonRegion 0 15.73 6.26 11.24 24.08 28.13 21.82 24.28 13.83 12.56 13.95 13.70 23.56 12.00 13.01 5.52 15.12 10.12 6.10 9.24 12.56 3.68 9.25 8.53 51 E13_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER13b ExonRegion 1 72.31 135.57 67.95 83.40 129.80 392.96 225.61 68.89 63.13 111.54 35.36 91.71 56.95 65.15 32.86 55.38 33.72 90.48 67.28 57.38 25.55 28.04 29.55 53 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 Ix Intron 0 26.10 24.57 11.84 37.71 40.05 38.63 42.75 14.14 16.53 21.20 18.39 23.85 18.92 13.05 9.79 17.05 13.88 9.25 9.53 14.41 3.22 13.74 8.16 55 Ix_AR2 ActiveIntronRegion 0 79.66 58.17 26.84 86.84 84.83 81.90 77.51 30.58 29.56 40.12 28.15 32.70 25.39 20.22 16.85 29.67 23.59 15.53 16.32 18.93 2.97 20.52 10.30 56 ER14a ExonRegion 0 372.70 522.01 424.54 524.34 552.78 627.36 446.83 356.89 266.20 456.74 231.58 202.80 194.58 162.22 171.31 177.81 149.40 243.57 288.66 249.08 98.41 108.07 88.85 57 ER14b ExonRegion 0 37.25 32.13 9.80 13.90 51.91 49.88 16.95 13.14 4.94 11.70 11.21 8.66 5.63 6.50 19.15 2.97 0.00 2.59 5.73 5.96 4.41 2.08 0.00 58 ER14c ExonRegion 0 6.35 10.17 0.61 3.41 8.03 9.17 5.96 6.05 0.00 4.01 3.87 4.33 4.69 2.44 11.61 0.00 0.00 0.92 0.00 0.00 0.00 0.00 0.00