Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC138655.2 Gene 0 3.80 10.41 36.11 22.86 11.29 10.82 18.58 9.16 10.00 10.82 0.91 2.18 0.49 0.59 0.24 1.63 0.39 26.10 11.70 16.13 0.09 0.41 0.34 2 439182 Transcript 0 0.99 0.63 8.63 5.68 2.08 2.00 8.14 2.80 0.57 1.71 0.30 0.55 0.00 0.30 0.00 0.46 0.00 3.86 2.23 2.65 0.17 0.65 0.23 3 435331 Transcript 0 1.69 4.31 11.96 6.83 5.70 4.47 7.46 3.06 4.02 3.61 0.61 0.96 0.16 0.14 0.08 0.47 0.13 10.20 4.59 9.05 0.00 0.03 0.06 4 ER1a ExonRegion 0 1.97 1.26 17.26 11.37 4.16 3.99 14.03 5.59 1.14 3.43 0.60 1.11 0.00 0.59 0.00 0.92 0.00 7.71 4.46 5.29 0.34 1.30 0.46 5 E1_Da NovelBoundary 0 0.00 0.00 19.13 13.02 0.00 2.61 28.75 3.49 1.79 6.21 2.42 0.00 0.00 0.00 0.00 0.00 0.00 15.01 9.32 9.72 0.00 0.00 0.00 6 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E2_Aa NovelBoundary 0 5.93 12.63 14.22 30.57 16.81 11.07 25.31 26.41 8.85 11.44 0.00 0.00 6.82 0.00 0.00 0.00 0.00 12.31 13.18 21.60 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 5.29 7.46 1.06 2.78 0.95 11.02 2.68 4.70 1.78 1.93 1.86 0.00 0.00 0.00 0.00 0.00 11.46 1.66 5.56 0.00 0.00 0.00 9 E2_Da NovelBoundary 0 3.78 6.64 29.72 32.50 4.33 8.69 40.01 6.28 10.73 10.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.44 0.00 8.88 0.00 0.00 0.00 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 Ix Intron 0 1.63 7.83 24.60 18.18 6.95 7.76 12.23 7.93 9.92 11.84 1.12 1.52 1.11 0.44 0.00 1.43 0.32 23.42 10.42 16.17 0.00 0.20 0.00 12 Ix_SR1 SilentIntronRegion 0 1.64 7.86 24.69 18.24 6.98 7.79 12.28 7.96 9.96 11.89 1.12 1.53 1.12 0.44 0.00 1.44 0.32 23.51 10.46 16.24 0.00 0.20 0.00 13 E3_Aa NovelBoundary 0 0.00 6.71 27.65 20.94 12.99 0.00 8.08 10.15 9.81 4.43 2.68 0.00 0.00 0.00 0.00 0.00 4.11 56.50 8.28 26.01 0.00 0.00 0.00 14 ER3a ExonRegion 0 3.17 0.00 0.27 0.00 9.88 5.50 3.02 0.00 0.18 0.00 0.11 0.00 0.00 0.00 0.00 0.00 0.00 1.63 4.92 17.58 0.00 0.00 0.00 15 E3_Da NovelBoundary 0 2.82 14.60 9.64 19.78 0.00 11.07 16.16 8.46 7.12 12.84 0.00 0.00 0.00 0.00 0.00 0.00 4.58 27.44 17.51 23.59 0.00 0.00 0.00 16 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 Ix Intron 0 4.43 10.64 18.87 18.06 14.70 13.43 17.83 15.16 7.70 10.28 0.51 0.00 1.12 0.35 1.70 0.00 0.43 30.63 11.66 24.48 0.58 0.00 1.15 18 Ix_SR1 SilentIntronRegion 0 4.45 10.69 18.97 18.15 14.77 13.50 17.92 15.24 7.74 10.33 0.51 0.00 1.12 0.35 1.70 0.00 0.43 30.79 11.72 24.61 0.58 0.00 1.16 19 E4_Aa NovelBoundary 0 0.00 22.76 40.68 35.76 12.14 10.28 25.92 28.92 10.97 11.26 0.00 0.00 0.00 0.00 0.00 0.00 3.74 31.67 40.28 43.34 0.00 0.00 0.00 20 ER4a ExonRegion 0 0.00 0.84 7.57 8.54 3.70 0.00 8.02 1.68 10.50 5.03 0.00 0.00 0.00 1.24 0.00 0.35 0.00 24.67 17.43 12.08 0.00 0.00 1.47 21 E4_Da KnownBoundary 0 0.00 2.63 44.08 29.43 7.47 0.00 14.44 4.81 26.24 17.08 0.00 0.00 0.00 4.83 0.00 0.00 0.00 55.67 31.62 18.92 0.00 0.00 4.10 22 ER4b ExonRegion 0 5.28 16.25 52.06 33.09 15.83 15.89 23.27 12.61 15.24 16.28 1.01 2.96 0.81 0.69 0.40 2.33 0.65 37.92 16.37 22.09 0.00 0.14 0.32