Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC074117.3 Gene 0 65.60 61.98 75.71 81.24 86.76 45.15 70.36 60.96 47.36 82.94 46.15 51.56 42.32 53.80 72.16 80.22 69.28 78.79 84.62 77.73 43.53 23.83 51.31 2 447070 Transcript 0 34.32 28.37 41.26 38.73 39.99 23.01 37.22 31.67 24.16 40.26 24.44 22.61 21.01 25.64 39.17 46.84 38.47 48.93 49.34 41.96 25.81 12.49 30.97 3 453289 Transcript 0 4.19 6.76 4.80 6.37 5.62 11.34 10.78 3.49 4.01 7.00 4.50 1.06 0.00 8.12 11.90 6.49 6.87 2.79 15.93 4.17 8.90 2.93 7.73 4 412749 Transcript 0 0.00 0.01 0.00 0.00 0.01 0.00 0.01 0.00 0.71 0.01 0.25 0.91 0.00 0.53 0.58 0.00 0.02 0.00 0.00 0.02 0.00 0.00 0.00 5 ER1a ExonRegion 0 8.13 3.91 20.14 14.14 8.96 9.21 13.94 9.48 4.46 8.86 9.69 2.10 4.17 5.26 18.50 26.33 14.33 36.84 34.63 16.54 11.95 6.09 17.68 6 E1_Da NovelBoundary 0 0.00 0.00 14.87 1.47 7.81 8.35 6.71 2.46 4.02 13.65 9.11 0.00 0.00 6.83 15.58 0.00 21.04 4.60 4.33 3.26 37.93 0.00 3.67 7 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 I1 Intron 1 7.04 10.52 4.05 2.25 26.70 9.49 38.16 1.90 0.00 2.53 14.29 1.60 0.00 33.44 18.80 15.38 14.64 8.84 2.35 9.44 0.81 3.85 2.17 9 I1_AR1 ActiveIntronRegion 1 7.14 10.68 4.10 2.27 27.09 9.63 38.72 1.93 0.00 2.56 14.50 1.62 0.00 33.93 19.07 15.60 14.85 8.97 2.39 9.57 0.83 3.91 2.20 10 E2_Aa NovelBoundary 0 11.11 0.00 15.49 15.68 35.91 21.86 18.46 2.55 6.45 10.58 4.90 7.35 0.00 38.55 18.42 19.99 4.49 40.71 11.20 3.00 13.96 0.00 0.00 11 ER2a ExonRegion 0 4.19 6.76 4.80 6.37 5.62 11.34 10.78 3.49 4.01 7.00 4.50 1.06 0.00 8.12 11.90 6.49 6.87 2.79 15.93 4.17 8.90 2.93 7.73 12 E2_Ab KnownBoundary 0 13.71 18.48 25.07 19.31 15.45 36.68 29.41 14.66 9.64 18.78 9.05 6.30 0.00 21.31 26.70 16.66 20.10 14.18 45.18 14.57 29.78 12.68 18.35 13 ER2b ExonRegion 0 8.41 10.77 18.70 15.80 15.72 36.02 10.48 10.99 6.45 16.82 19.38 6.49 1.80 27.67 28.34 20.20 30.76 29.97 34.67 21.99 16.32 7.81 9.32 14 E2_Da NovelBoundary 1 16.89 18.62 62.77 46.78 27.67 26.01 22.43 21.97 18.26 46.87 21.48 6.30 5.68 80.99 42.52 83.65 29.45 59.20 86.03 39.63 24.90 11.63 16.56 15 E2a_E3a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 1.62 0.00 4.05 0.00 0.00 4.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 I2 Intron 1 0.00 0.00 0.00 1.44 13.09 3.84 1.85 0.00 1.30 4.84 22.98 5.57 0.00 27.88 17.77 10.38 9.22 8.43 13.35 22.30 10.78 5.82 6.15 17 I2_AR1 ActiveIntronRegion 1 0.00 0.00 0.00 1.46 13.27 3.90 1.88 0.00 1.32 4.91 23.28 5.65 0.00 28.26 18.01 10.48 9.35 8.55 13.54 22.61 10.90 5.90 6.24 18 E3_Aa NovelBoundary 0 74.61 105.77 44.20 92.26 182.26 43.90 65.18 43.29 30.18 79.46 34.27 33.91 33.93 80.29 56.74 67.59 54.60 61.52 38.87 46.40 25.27 19.10 10.84 19 ER3a ExonRegion 0 39.50 80.38 40.86 78.80 109.82 39.20 57.04 29.97 24.59 46.97 36.03 47.53 23.65 62.83 67.77 50.37 24.81 39.15 90.77 59.84 10.95 14.72 21.05 20 E3_Da KnownBoundary 0 52.16 104.65 60.73 134.38 145.16 63.03 58.29 55.12 42.07 72.69 45.01 30.61 45.29 57.45 62.55 48.62 30.29 54.06 68.90 62.26 9.14 22.78 20.40 21 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3b ExonRegion 1 62.89 112.08 89.58 167.52 169.47 58.40 78.65 74.09 51.67 138.03 49.71 115.33 61.83 79.24 70.00 50.40 44.76 42.31 70.41 73.13 9.63 36.01 19.09 23 E3_Db KnownBoundary 0 114.84 141.88 89.17 181.03 212.82 67.92 85.19 80.42 73.32 120.64 62.96 136.54 79.70 96.77 101.86 74.60 71.34 72.58 65.79 54.14 10.75 33.31 40.72 24 ER3c ExonRegion 0 94.83 81.19 103.65 102.06 111.03 59.81 97.70 85.52 68.02 111.93 63.63 65.74 58.86 71.66 99.01 114.19 101.08 109.95 113.40 109.33 65.47 31.40 75.24 25 Ix Intron 0 22.87 16.70 3.16 12.29 38.16 15.06 14.31 5.57 5.57 9.60 2.51 9.25 12.88 15.90 14.09 30.83 8.56 11.95 26.16 11.95 9.52 6.30 7.62 26 Ix_SR1 SilentIntronRegion 0 23.26 16.99 3.21 12.49 38.75 15.30 14.54 5.66 5.66 9.77 2.55 9.41 13.10 16.17 14.33 31.34 8.71 12.15 26.61 12.14 9.69 6.41 7.75 27 E4_Aa NovelBoundary 1 191.44 94.13 139.50 148.90 98.13 124.81 150.24 66.25 45.69 37.82 66.65 44.56 33.11 93.53 28.56 90.15 79.57 43.48 93.65 57.72 39.17 56.52 52.93 28 ER4a ExonRegion 0 0.00 0.02 0.00 0.00 0.01 0.00 0.03 0.01 1.42 0.01 0.50 1.83 0.00 1.07 1.17 0.00 0.03 0.00 0.00 0.04 0.00 0.00 0.00