Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DNAJC5G Gene 0 34.08 46.43 197.15 102.34 1.45 85.69 1.35 30.24 35.27 2.34 0.42 1.65 1.47 0.78 2.73 1.68 1.43 40.30 1.94 83.90 0.57 0.68 1.15 2 452860 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 445798 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 296097 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 420191 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 402462 Transcript 0 3.96 6.19 26.10 9.19 4.50 26.72 8.61 0.76 2.25 1.58 0.00 2.63 0.00 1.62 5.01 12.26 5.00 6.47 7.26 14.50 1.08 3.21 3.12 7 404433 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 406962 Transcript 0 7.26 19.93 70.48 39.77 0.01 18.52 0.00 10.48 5.94 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.74 0.00 32.12 0.00 0.00 0.00 9 460358 Transcript 0 34.66 36.57 264.07 137.00 1.58 126.71 0.15 38.35 38.37 3.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49.75 1.25 81.93 0.00 0.00 0.00 10 ER1a ExonRegion 0 3.42 2.35 10.37 2.62 0.00 3.67 0.00 0.93 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 6.87 0.00 0.00 0.00 11 E1_Ac KnownBoundary 0 26.52 11.71 65.37 23.14 0.00 24.30 0.00 7.97 6.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.19 0.00 45.32 0.00 0.00 0.00 12 ER1b ExonRegion 0 9.74 8.95 33.82 17.35 0.00 20.72 0.00 4.49 5.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.13 1.38 29.86 0.00 0.00 0.00 13 E1_Ad KnownBoundary 0 0.00 15.46 58.57 39.09 0.00 35.72 0.00 10.35 8.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.17 4.80 24.86 0.00 0.00 0.00 14 ER1c ExonRegion 0 10.23 15.25 61.06 29.87 0.00 42.48 0.00 10.37 7.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.48 3.19 47.52 0.00 0.00 0.00 15 ER1d ExonRegion 0 1.03 12.18 92.14 38.62 0.07 53.11 0.00 6.87 6.11 0.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.02 1.14 49.10 0.00 0.00 0.00 16 E1_Da NovelBoundary 0 0.00 9.54 64.22 18.41 0.00 52.87 2.25 4.89 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.45 0.00 15.92 0.00 0.00 0.00 17 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E1_Db NovelBoundary 0 11.34 3.35 67.59 40.39 0.00 27.03 0.00 6.53 15.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.97 0.00 50.56 0.00 0.00 0.00 21 E1b_E2b KnownJunction 0 7.93 4.80 7.81 3.76 9.00 32.14 17.00 1.52 3.27 2.01 0.00 5.25 0.00 2.06 8.90 24.52 10.00 5.97 13.46 20.26 2.16 6.43 6.23 22 ER1e ExonRegion 0 0.00 7.57 44.39 14.61 0.00 21.29 0.22 0.00 1.24 1.15 0.00 0.00 0.00 1.17 1.13 0.00 0.00 6.98 1.06 8.75 0.00 0.00 0.00 23 E2_Aa NovelBoundary 0 57.34 32.03 86.04 83.71 38.96 45.66 36.43 67.69 56.34 53.05 18.06 18.91 12.01 9.48 13.35 61.69 52.17 66.95 18.17 67.56 18.16 15.43 35.85 24 ER2a ExonRegion 0 22.16 21.84 13.87 6.16 22.30 23.84 18.03 5.31 5.73 0.00 6.82 27.21 32.31 12.71 55.70 24.14 21.27 13.82 21.04 37.35 10.34 10.47 23.42 25 E2_Ab KnownBoundary 0 443.56 465.97 572.33 723.62 335.40 350.37 299.95 664.66 592.15 456.60 146.51 28.06 36.85 50.39 142.41 367.25 211.50 889.59 310.50 402.36 179.40 115.06 230.22 26 ER2b ExonRegion 0 17.21 24.69 82.19 46.10 2.56 65.58 4.47 19.74 19.16 0.59 1.18 3.86 4.20 3.89 8.33 6.88 3.97 34.85 2.71 50.81 2.54 3.72 3.97 27 E2_Da NovelBoundary 0 10.15 2.50 174.92 109.08 0.00 32.20 0.00 25.71 30.87 1.61 0.00 0.00 0.00 0.00 0.00 0.00 4.02 37.81 0.00 35.35 0.00 2.33 0.00 28 E2a_E3c KnownJunction 0 3.48 0.00 64.99 9.02 0.00 8.23 0.00 16.72 32.35 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.53 0.00 15.40 0.00 0.00 0.00 29 I2 Intron 0 24.13 34.99 150.67 89.26 1.11 79.08 0.00 16.02 18.69 2.13 0.00 0.00 0.00 0.00 0.00 0.62 0.68 28.20 0.00 45.43 0.00 0.43 0.00 30 I2_SR1 SilentIntronRegion 0 24.23 35.14 151.27 89.63 1.11 79.38 0.00 16.09 18.76 2.13 0.00 0.00 0.00 0.00 0.00 0.62 0.69 28.31 0.00 45.62 0.00 0.43 0.00 31 E3_Aa NovelBoundary 0 10.22 33.09 268.65 159.59 0.00 62.41 0.00 13.84 21.96 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.70 0.00 30.87 0.00 0.00 0.00 32 ER3a ExonRegion 0 3.82 8.50 119.76 66.94 0.04 8.48 0.00 16.12 8.54 1.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.44 0.00 44.37 0.00 0.00 0.00 33 E3_Ab KnownBoundary 0 0.00 14.73 195.06 111.07 0.00 18.80 0.00 26.53 13.51 3.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42.20 0.00 62.51 0.00 0.00 0.00 34 E3_Ac KnownBoundary 0 25.12 27.36 149.52 63.10 4.33 37.42 0.00 7.64 11.81 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.70 0.00 11.82 0.00 0.00 0.00 35 ER3b ExonRegion 0 13.34 19.19 228.29 100.38 2.68 30.78 0.00 22.02 17.94 3.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43.94 0.00 43.85 0.00 0.00 0.00 36 ER3c ExonRegion 0 12.52 16.59 126.19 47.50 0.58 36.33 0.00 13.86 18.96 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.49 0.00 27.18 0.00 0.00 0.00 37 E3_Da NovelBoundary 0 109.43 97.61 406.90 251.32 7.89 358.15 5.70 67.44 67.85 7.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 173.40 3.95 69.54 0.00 0.00 0.00 38 E3a_E4a KnownJunction 0 0.00 0.00 1.33 6.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 0.00 0.00 40 E3a_E4d KnownJunction 0 0.00 0.00 2.75 1.90 0.00 0.00 0.00 0.00 1.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 2.81 0.00 0.00 0.00 41 I3 Intron 0 19.66 19.63 140.68 62.89 0.97 73.82 1.21 11.73 28.83 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.60 27.62 0.00 58.13 0.00 0.00 0.00 42 I3_SR1 SilentIntronRegion 0 5.02 9.65 31.35 10.82 0.00 17.40 0.00 1.53 5.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.29 0.00 16.40 0.00 0.00 0.00 43 I3_AR1 ActiveIntronRegion 0 26.40 24.31 191.07 86.86 1.42 99.84 1.76 16.42 39.59 1.82 0.00 0.00 0.00 0.00 0.00 0.00 0.88 38.78 0.00 77.39 0.00 0.00 0.00 44 E4_Aa NovelBoundary 0 103.50 122.48 319.53 149.53 0.00 197.33 2.21 30.48 60.33 1.61 0.00 0.00 0.00 0.00 0.00 0.00 4.77 111.72 0.00 174.05 0.00 0.00 0.00 45 ER4a ExonRegion 0 21.81 36.23 159.65 56.38 0.00 56.85 0.00 17.60 28.28 1.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.83 0.00 65.35 0.00 0.00 0.00 46 E4_Ab KnownBoundary 0 48.97 88.27 343.87 124.09 0.00 88.24 0.00 37.25 58.01 3.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.96 0.00 100.29 0.00 0.00 0.00 47 ER4b ExonRegion 0 38.44 43.91 267.36 111.81 1.05 102.07 1.71 37.04 44.29 4.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37.71 0.00 98.04 0.00 0.00 0.00 48 E4_Ac KnownBoundary 0 48.08 60.52 225.78 122.03 0.00 112.95 1.99 50.40 60.71 3.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57.83 0.00 83.09 0.00 0.00 0.00 49 ER4c ExonRegion 0 50.26 74.70 250.36 128.90 0.00 140.08 1.24 36.94 57.31 3.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51.69 3.76 106.77 0.00 0.00 0.00 50 E4_Da KnownBoundary 0 54.31 48.74 254.31 122.56 0.00 170.81 1.77 37.05 50.29 2.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42.66 0.00 69.41 0.00 0.00 0.00 51 E4a_E4d KnownJunction 0 0.00 3.03 20.96 10.02 0.00 0.00 0.00 2.42 2.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 17.96 0.00 0.00 0.00 52 ER4d ExonRegion 0 34.66 36.57 264.07 137.00 1.58 126.71 0.15 38.35 38.37 3.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49.75 1.25 81.93 0.00 0.00 0.00 53 E4_Ad KnownBoundary 0 42.45 62.62 366.43 159.52 0.00 106.25 1.77 53.31 36.57 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42.16 9.60 91.53 0.00 0.00 0.00 54 ER4e ExonRegion 0 39.95 59.50 325.86 146.99 0.00 106.08 0.74 37.67 33.43 5.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.70 5.89 78.84 0.00 0.00 0.00 55 E4_Db KnownBoundary 0 62.60 71.24 320.63 154.06 0.00 133.45 0.00 35.94 39.84 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.24 7.81 82.13 0.00 0.00 0.00 56 ER4f ExonRegion 0 50.95 48.03 256.12 115.56 0.60 125.86 0.00 40.17 40.13 0.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49.13 2.51 80.34 0.00 0.00 0.00 57 E4_Dc NovelBoundary 0 6.82 24.40 192.45 81.24 0.00 57.86 0.00 8.42 13.11 2.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.38 0.00 42.19 0.00 0.00 0.00 58 E4c_E5a KnownJunction 0 59.49 30.13 206.17 81.54 3.99 152.47 0.00 48.18 43.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.39 0.00 67.05 0.00 0.00 0.00 59 I4 Intron 0 6.76 15.83 46.29 34.26 0.53 23.79 0.53 6.17 8.82 0.85 0.19 0.00 0.00 0.00 0.00 0.00 0.00 7.25 0.00 23.15 0.00 0.00 0.00 60 I4_SR1 SilentIntronRegion 0 6.79 15.89 46.48 34.39 0.54 23.89 0.53 6.19 8.85 0.86 0.19 0.00 0.00 0.00 0.00 0.00 0.00 7.27 0.00 23.24 0.00 0.00 0.00 61 E5_Aa NovelBoundary 0 65.34 61.11 171.52 141.81 0.00 48.27 2.21 25.14 23.50 6.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.87 0.00 89.10 0.00 0.00 0.00 62 ER5a ExonRegion 0 47.72 38.10 215.54 86.82 1.38 104.85 0.00 42.42 53.31 2.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.11 3.65 92.58 0.00 0.00 0.00 63 E5_Da NovelBoundary 0 0.00 40.85 82.20 98.66 0.00 44.01 0.00 3.86 7.09 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.12 0.00 21.54 0.00 0.00 0.00 64 E5a_E6a KnownJunction 0 44.23 38.81 259.87 101.45 0.00 109.43 0.00 53.07 47.48 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.98 8.28 107.06 0.00 0.00 0.00 65 I5 Intron 0 8.86 14.36 50.15 53.65 0.00 13.43 0.00 8.76 6.74 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.29 0.00 20.59 0.00 0.00 0.00 66 I5_SR1 SilentIntronRegion 0 8.94 14.48 50.67 54.20 0.00 13.57 0.00 8.85 6.81 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.34 0.00 20.80 0.00 0.00 0.00 67 E6_Aa NovelBoundary 0 6.59 6.05 60.52 76.25 0.00 5.68 0.00 10.35 5.24 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.48 0.00 25.95 0.00 0.00 0.00 68 ER6a ExonRegion 0 42.01 45.82 238.96 128.89 0.47 113.20 0.93 46.44 55.70 3.17 0.00 1.26 0.00 0.00 0.36 0.00 0.58 71.08 1.39 114.85 0.00 0.00 0.00 69 E6_Da KnownBoundary 0 55.05 50.78 151.95 67.12 0.00 85.46 0.00 31.87 53.47 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.54 0.00 98.82 0.00 0.00 0.00 70 ER6b ExonRegion 0 46.22 71.26 235.30 136.55 0.38 92.30 0.19 34.28 42.87 2.46 0.28 0.77 0.00 0.00 0.15 0.85 0.95 41.38 0.46 109.45 0.00 0.00 0.00 71 E6_Db KnownBoundary 0 11.93 17.96 67.03 49.84 0.00 20.73 0.00 15.48 14.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.86 0.00 45.64 0.00 0.00 0.00 72 E6_Dc KnownBoundary 0 10.59 20.52 77.64 42.72 0.00 43.27 0.00 7.72 7.64 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 31.00 0.00 0.00 0.00 73 ER6c ExonRegion 0 30.69 69.14 186.26 109.71 0.00 71.52 0.00 32.84 21.00 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.33 0.00 107.45 0.00 0.00 0.00 74 ER6d ExonRegion 0 17.98 51.28 91.67 52.38 0.00 47.09 0.00 15.31 9.27 2.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.78 0.00 51.99 0.00 0.00 0.00 75 IG14 Intergenic 0 30.01 30.40 198.30 75.45 0.29 70.04 0.44 23.64 26.30 2.44 0.00 0.24 0.00 0.06 0.00 0.00 0.00 39.02 0.00 75.89 0.00 0.00 0.00 76 IG14_AR1 ActiveIntergenicRegion 0 28.72 48.87 186.12 80.37 0.46 60.74 0.61 23.33 24.10 3.16 0.00 0.00 0.00 0.20 0.00 0.00 0.00 35.76 0.00 75.41 0.00 0.00 0.00 77 IG14_SR1 SilentIntergenicRegion 0 31.66 22.76 211.71 76.34 0.23 75.89 0.37 24.63 28.34 2.12 0.00 0.37 0.00 0.00 0.00 0.00 0.00 42.28 0.00 79.24 0.00 0.00 0.00 78 IG14_AR2 ActiveIntergenicRegion 0 11.97 2.67 66.86 15.46 0.00 49.00 0.00 8.75 9.46 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.47 0.00 20.08 0.00 0.00 0.00