Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PEX13	Gene	0	33.21	68.44	50.09	64.18	57.01	73.61	70.20	39.55	35.38	51.49	50.95	46.60	48.51	52.12	52.86	50.73	50.79	52.90	42.27	61.31	35.45	47.70	37.45
2	444100	Transcript	0	0.76	0.49	2.89	2.57	0.74	6.31	3.07	2.56	0.43	0.43	2.41	0.69	0.15	0.88	1.53	1.00	2.06	7.04	1.05	6.79	1.12	0.49	0.43
3	401576	Transcript	0	0.00	0.00	0.00	0.00	0.00	1.02	0.00	2.16	0.00	0.00	0.00	0.00	0.00	0.81	1.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.09
4	405183	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	472678	Transcript	0	0.00	0.00	1.99	0.00	0.00	0.00	0.00	1.13	1.51	0.84	9.95	0.00	4.76	0.81	0.00	0.19	5.50	2.14	0.00	3.90	0.00	2.39	3.45
6	295030	Transcript	0	42.29	97.35	75.16	88.68	85.26	160.80	80.83	61.26	66.86	81.09	85.34	68.38	101.85	103.66	112.33	108.55	94.82	115.57	66.01	93.96	89.07	96.22	74.56
7	414712	Transcript	0	0.00	0.00	2.37	4.13	0.00	2.21	0.00	2.38	0.00	1.16	0.00	0.00	0.00	0.00	0.00	0.00	4.30	0.00	4.05	2.88	0.00	0.00	0.00
8	ER1a	ExonRegion	0	1.77	1.23	4.11	1.69	0.88	4.15	1.50	1.87	1.67	0.12	1.17	0.51	0.58	2.78	1.48	1.45	1.49	3.52	1.44	2.25	1.66	0.63	1.42
9	E1_Ab	KnownBoundary	0	10.22	0.00	4.94	6.23	7.64	28.22	9.54	1.89	0.00	1.67	0.00	0.00	0.00	4.77	4.45	0.00	0.00	13.60	0.00	0.00	0.00	0.00	3.50
10	ER1b	ExonRegion	0	3.00	0.00	1.90	2.57	2.47	17.58	6.27	1.66	0.00	0.91	0.58	0.00	0.00	1.75	4.65	5.05	1.81	11.40	0.00	2.05	2.08	0.00	3.21
11	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	3.14	0.00	2.21	0.00	0.00	0.00	2.47	0.00	0.00	0.00	0.00	0.00	4.77	4.97	0.00	0.00	0.00	0.00	0.00
12	E1a_E1c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.04	0.00	4.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.18
13	ER1c	ExonRegion	0	1.10	0.65	1.85	1.51	1.52	0.25	3.17	0.98	0.00	0.81	3.27	0.00	0.00	0.74	3.12	2.53	1.43	4.15	0.00	2.99	1.39	1.31	0.04
14	E1_Ac	KnownBoundary	0	7.41	3.35	1.83	4.03	4.33	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	3.00	0.00	0.00	0.00	0.00	0.00	8.63	0.00	0.00	0.00
15	E1_Ad	KnownBoundary	0	3.78	0.00	0.00	0.00	0.00	0.00	2.25	2.55	0.00	0.00	0.00	0.00	0.00	2.47	0.00	4.36	4.77	5.14	0.00	0.00	0.00	0.00	0.00
16	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E1_Af	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER1d	ExonRegion	0	4.72	4.07	1.23	2.73	3.50	7.19	1.94	5.19	0.86	1.24	2.08	0.00	0.00	6.62	0.67	10.97	4.06	5.54	2.70	7.53	0.00	1.44	4.52
19	E1_Ag	KnownBoundary	0	16.15	17.83	6.95	4.53	38.71	55.25	27.38	1.85	6.86	11.20	19.00	0.00	0.00	14.30	4.45	31.53	44.04	10.65	41.88	22.12	13.71	11.39	26.89
20	ER1e	ExonRegion	0	8.85	9.80	3.90	4.09	9.97	26.67	8.67	5.97	3.14	4.90	6.50	0.00	0.00	9.74	6.07	14.59	15.60	5.54	16.51	7.93	6.61	5.87	11.48
21	ER1f	ExonRegion	0	12.70	16.27	6.13	5.45	21.41	40.34	19.86	6.91	4.94	8.03	11.60	0.00	0.00	12.99	8.70	20.80	29.71	5.54	25.48	10.64	11.02	6.25	20.56
22	ER1g	ExonRegion	0	13.49	15.25	6.59	5.11	24.75	43.55	28.80	7.13	5.56	8.03	17.40	0.00	0.00	15.43	12.69	21.92	38.79	6.93	25.88	10.64	13.22	6.25	20.19
23	ER1h	ExonRegion	1	42.37	50.64	28.19	29.10	59.38	136.44	110.86	16.17	19.75	35.48	70.42	0.29	3.29	38.64	51.38	67.06	96.14	92.34	94.96	40.53	70.19	32.41	75.21
24	E1b_E2a	KnownJunction	0	0.00	0.00	1.60	3.90	0.00	11.36	4.33	4.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.31	0.00	10.74	0.00	0.00	0.00
25	E1b_E2b	KnownJunction	0	0.00	3.35	5.88	10.92	4.07	5.56	6.01	4.60	1.59	7.01	8.90	0.00	0.00	0.00	6.30	0.00	4.58	1.78	0.00	6.46	0.00	0.00	3.50
26	E1b_E2c	KnownJunction	0	0.00	0.00	2.37	4.13	0.00	2.21	0.00	2.38	0.00	1.16	0.00	0.00	0.00	0.00	0.00	0.00	4.30	0.00	4.05	2.88	0.00	0.00	0.00
27	E1b_E3a	KnownJunction	0	0.00	0.00	8.22	3.10	7.13	15.05	9.41	5.91	13.17	16.52	18.37	0.00	0.00	4.94	4.45	8.03	16.46	20.10	3.86	5.82	42.44	16.29	4.35
28	E1c_E3a	KnownJunction	0	0.00	0.00	2.60	0.00	0.00	0.00	0.00	2.26	1.79	1.13	11.32	0.00	5.84	0.00	0.00	0.00	8.42	1.70	0.00	3.26	0.00	3.06	4.35
29	ER1i	ExonRegion	0	0.00	0.00	1.39	0.00	0.00	0.00	0.00	0.00	1.24	0.55	8.57	0.00	3.67	1.62	0.00	0.39	2.58	2.57	0.00	4.53	0.00	1.72	2.55
30	ER2a	ExonRegion	0	0.18	0.09	4.00	3.20	0.58	9.49	3.28	2.93	0.05	0.80	5.21	2.26	0.00	0.00	1.51	0.00	5.31	8.19	2.77	11.19	1.44	0.00	0.26
31	ER2b	ExonRegion	1	2.12	2.03	11.27	14.99	3.21	13.94	10.33	4.84	1.24	10.09	15.46	4.33	0.00	1.30	11.61	0.00	17.16	10.35	5.73	22.98	6.17	0.00	2.94
32	ER2c	ExonRegion	0	21.56	49.73	58.61	79.88	60.51	31.22	87.08	36.53	19.95	48.68	36.26	33.62	12.01	13.62	20.05	16.05	11.89	17.76	38.66	60.33	2.60	8.69	6.77
33	E2_Da	NovelBoundary	0	3.11	27.82	13.57	17.15	8.32	0.00	23.27	4.27	3.10	10.64	2.47	20.86	16.56	2.47	10.38	3.85	0.00	1.78	3.86	14.89	0.00	5.51	0.00
34	ER2d	ExonRegion	0	3.91	2.66	6.69	4.82	1.03	0.42	5.81	0.13	0.19	2.82	0.30	3.66	1.08	1.62	3.57	0.00	1.27	1.71	5.15	1.96	0.00	1.28	0.00
35	ER2e	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.62	2.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	I2	Intron	0	6.91	10.25	19.04	24.38	16.87	4.41	14.60	5.83	3.11	9.65	1.99	2.51	4.49	1.90	3.57	2.30	3.22	2.40	5.66	10.06	0.88	1.49	1.01
37	I2_SR1	SilentIntronRegion	0	6.92	10.27	19.06	24.41	16.89	4.42	14.62	5.84	3.11	9.66	2.00	2.51	4.49	1.90	3.57	2.30	3.22	2.40	5.67	10.07	0.88	1.49	1.01
38	ER3a	ExonRegion	0	32.31	68.44	44.12	60.81	57.89	75.34	55.87	47.85	51.76	64.03	95.25	47.83	55.53	89.29	71.39	86.56	90.73	92.08	63.39	93.73	70.15	75.08	68.75
39	E3_Da	KnownBoundary	0	83.87	109.45	96.42	91.46	118.25	186.54	93.54	99.36	82.93	118.73	109.40	146.30	69.80	160.75	144.14	141.84	104.91	107.65	108.99	126.30	82.41	147.82	70.34
40	ER3b	ExonRegion	0	58.27	143.98	79.42	88.57	68.14	141.39	89.90	69.74	69.89	84.92	94.67	87.16	86.78	136.21	99.89	112.70	131.52	108.98	66.53	107.57	103.65	104.97	74.80
41	E3b_E4a	KnownJunction	1	33.04	124.71	82.88	82.01	168.68	315.16	142.38	66.54	79.22	95.15	108.45	64.52	177.59	138.56	121.52	99.80	101.08	118.06	83.48	115.18	115.71	119.65	65.13
42	E4_Aa	NovelBoundary	0	0.00	7.96	0.00	0.00	23.43	7.67	22.96	5.05	3.59	0.00	2.68	7.05	0.00	4.59	0.00	0.00	3.65	0.00	0.00	5.11	3.09	3.12	0.00
43	ER4a	ExonRegion	0	45.37	89.75	85.35	107.33	106.33	183.58	90.51	71.87	71.94	80.87	87.72	81.47	137.35	133.45	157.08	189.89	114.96	205.89	92.17	104.41	99.01	130.63	125.76
44	E4a_E5a	KnownJunction	0	59.12	112.35	128.94	166.68	80.39	189.44	60.28	99.11	113.28	137.56	148.09	94.68	108.76	136.44	206.81	181.23	141.37	183.76	110.21	163.05	133.87	125.22	129.41
45	ER5a	ExonRegion	1	57.96	113.30	66.17	84.40	80.90	120.15	92.50	54.38	53.68	71.51	54.77	82.46	100.61	72.33	84.25	59.63	63.55	56.63	39.80	67.74	39.71	80.56	47.92
46	IG50	Intergenic	0	14.15	37.10	20.88	34.44	59.47	72.79	45.07	23.82	20.81	21.30	12.42	25.26	33.27	25.47	21.92	18.33	11.87	13.84	22.51	18.31	5.65	40.42	22.64
47	IG50_AR1	ActiveIntergenicRegion	0	18.32	37.88	23.89	45.03	79.49	97.58	61.64	31.41	26.12	24.25	16.72	40.43	41.25	32.98	28.84	23.07	15.37	16.96	33.90	21.70	7.31	51.28	28.65
48	IG50_SR1	SilentIntergenicRegion	0	8.50	36.46	16.93	20.09	32.25	39.11	22.49	13.53	13.65	17.43	6.57	4.41	22.51	15.30	12.55	11.94	7.14	9.66	6.89	13.81	3.41	25.76	14.52