Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM178 Gene 0 8.00 19.32 31.60 32.50 38.40 20.98 28.35 22.87 31.28 24.74 0.00 0.74 0.24 0.44 1.92 2.15 0.82 6.96 1.12 10.41 13.42 2.28 1.94 2 437068 Transcript 0 0.00 0.00 0.63 1.26 0.56 0.38 0.18 0.70 1.24 0.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 0.14 0.00 3 482239 Transcript 0 0.00 0.00 0.00 1.09 1.91 0.65 0.47 1.38 0.66 0.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.76 0.00 0.74 1.05 4 281961 Transcript 0 0.93 2.08 4.99 1.46 1.10 2.16 1.73 2.08 3.26 4.06 0.00 0.00 0.00 0.64 0.00 0.73 0.41 1.42 0.39 2.08 2.93 0.26 0.36 5 378734 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 413011 Transcript 0 0.00 0.00 0.55 0.00 0.00 0.00 0.00 0.76 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.70 0.00 0.00 7 495402 Transcript 0 0.00 0.29 0.00 1.32 0.38 0.26 1.32 0.73 0.52 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1a ExonRegion 0 0.00 0.00 1.27 2.53 1.12 0.76 0.37 1.40 0.95 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.84 0.29 0.00 9 E1_Da NovelBoundary 0 0.00 5.33 16.41 13.09 4.24 15.96 4.28 13.06 16.00 7.92 0.00 0.00 0.00 0.00 0.00 0.00 3.93 6.26 0.00 5.37 19.52 0.00 7.68 10 E1a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 I1 Intron 0 2.90 2.09 1.88 6.95 6.41 10.04 0.45 4.41 8.82 4.09 0.00 0.00 0.00 0.00 0.70 0.00 0.00 1.88 1.09 3.64 7.53 0.71 1.01 12 I1_SR1 SilentIntronRegion 0 2.94 2.12 1.90 7.05 6.50 10.14 0.46 4.47 8.94 4.15 0.00 0.00 0.00 0.00 0.71 0.00 0.00 1.91 1.11 3.69 7.63 0.72 1.02 13 E2_Aa NovelBoundary 0 0.00 5.99 14.31 12.42 41.94 15.33 1.94 15.53 8.22 2.63 0.00 0.00 0.00 0.00 5.69 0.00 0.00 0.00 0.00 3.26 11.18 0.00 0.00 14 ER2a ExonRegion 0 0.00 0.00 0.00 2.17 3.82 1.31 0.94 2.76 1.31 0.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.52 0.00 1.49 2.09 15 E2a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E3_Aa NovelBoundary 0 0.00 3.16 12.83 1.70 3.99 2.44 4.50 7.93 13.54 13.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.20 4.24 6.01 20.45 0.00 0.00 17 ER3a ExonRegion 0 0.07 1.11 0.00 1.39 0.00 0.19 1.28 0.27 1.30 0.38 0.00 0.00 0.00 0.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E3_Ab KnownBoundary 0 0.00 3.22 0.00 1.80 0.00 0.00 5.83 3.49 1.71 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3b ExonRegion 0 0.54 2.38 7.94 1.78 0.92 1.71 5.86 4.13 7.52 6.82 0.00 0.00 0.00 0.38 0.00 0.79 0.00 0.45 0.00 3.43 7.74 0.56 0.00 20 E3_Da KnownBoundary 0 0.00 2.50 9.52 1.83 3.90 2.90 19.03 2.55 6.57 7.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.44 0.00 0.00 8.59 0.00 0.00 21 E3a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3c ExonRegion 0 0.60 5.13 14.97 2.99 1.96 4.44 3.90 5.96 7.87 11.79 0.00 0.00 0.00 0.99 0.00 2.20 1.22 4.27 1.18 6.24 8.80 0.77 1.09 23 E3_Ac KnownBoundary 0 3.78 21.44 38.32 6.83 8.06 5.34 7.95 16.92 22.42 18.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.62 0.00 15.34 19.09 0.00 0.00 24 ER3d ExonRegion 0 8.10 11.79 35.96 7.63 24.85 9.67 19.90 19.01 30.45 20.53 0.00 0.00 0.00 1.72 1.82 1.87 3.44 14.49 0.82 14.13 21.75 0.48 0.25 25 E3b_E6a KnownJunction 0 17.19 12.70 42.16 11.29 81.15 4.77 37.80 28.92 45.05 23.48 0.00 0.00 0.00 0.00 0.00 7.69 4.77 22.09 4.61 7.93 14.46 2.88 0.00 26 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.83 0.00 0.00 27 E4a_E6a KnownJunction 0 0.00 0.00 1.09 0.00 0.00 0.00 0.00 1.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.57 0.00 0.00 28 ER5a ExonRegion 0 0.00 0.58 0.00 0.78 0.76 0.52 2.64 1.47 1.05 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E5a_E6a KnownJunction 0 0.00 0.00 0.00 1.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER6a ExonRegion 0 11.31 29.15 54.59 43.64 39.60 14.41 22.23 28.67 51.04 38.47 0.00 0.00 0.00 1.42 4.22 7.22 1.82 27.28 3.77 21.02 34.31 3.44 7.73 31 E6a_E7a KnownJunction 0 7.41 35.52 58.87 56.30 35.91 38.44 35.82 32.57 53.44 47.04 0.00 0.00 0.00 4.71 0.00 8.37 4.49 13.51 0.00 21.67 28.91 0.00 0.00 32 E6a_E8a NovelJunction 0 3.78 3.35 10.23 0.00 0.00 12.61 4.42 13.72 6.83 3.14 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 8.83 2.88 0.00 33 ER7a ExonRegion 0 2.77 19.99 52.43 44.63 24.02 19.73 16.91 27.46 47.10 40.06 0.00 2.07 0.00 0.66 0.10 1.22 0.64 8.15 1.85 15.01 28.05 2.04 1.40 34 E7_Da KnownBoundary 0 2.89 33.55 53.72 59.47 3.65 12.95 18.55 39.02 59.06 41.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.03 0.00 14.13 22.98 3.00 0.00 35 ER7b ExonRegion 0 4.61 26.60 62.10 72.64 31.09 20.47 20.55 48.26 53.78 50.19 0.00 0.00 0.00 1.98 5.28 2.73 0.00 23.95 0.00 25.62 35.83 5.63 5.40 36 E7b_E8a KnownJunction 0 10.00 48.08 76.79 91.83 68.59 39.81 25.79 56.64 57.18 58.10 0.00 0.00 0.00 4.94 4.45 0.00 0.00 28.27 0.00 25.12 36.82 9.19 6.91 37 ER8a ExonRegion 0 12.50 42.25 68.42 88.73 72.34 53.86 57.69 47.06 75.84 52.13 0.00 2.58 0.00 1.26 6.91 6.09 0.00 17.51 0.00 33.71 41.53 4.81 5.80 38 E8_Da KnownBoundary 0 17.04 29.80 78.23 92.60 102.89 74.79 55.82 48.06 99.94 53.75 0.00 0.00 0.00 0.00 5.19 3.85 0.00 15.59 0.00 29.72 38.36 6.06 8.19 39 ER8b ExonRegion 0 12.68 33.55 59.21 60.81 71.14 42.79 38.33 37.74 56.28 45.47 0.00 2.84 0.00 0.00 7.05 4.13 0.43 17.00 1.10 27.27 41.87 5.35 9.92 40 E8_Db KnownBoundary 0 30.23 65.65 58.45 68.32 85.40 56.62 48.49 37.13 63.83 47.60 0.00 0.00 0.00 0.00 0.00 7.86 4.30 8.42 3.95 35.47 61.22 15.92 11.61 41 ER8c ExonRegion 0 18.63 55.71 67.80 60.53 79.45 58.96 62.71 47.07 76.97 53.32 0.00 1.51 0.00 0.57 2.24 6.15 2.59 13.16 2.84 22.88 32.37 3.73 3.36 42 E8_Dc KnownBoundary 0 32.15 48.61 68.95 74.75 101.61 60.87 75.65 69.42 83.33 42.28 0.00 0.00 0.00 0.00 0.00 3.59 0.00 11.65 0.00 28.89 18.10 3.12 3.67 43 ER8d ExonRegion 0 19.99 35.78 55.94 70.26 97.67 42.11 71.83 48.12 54.21 46.22 0.00 1.42 1.16 0.27 3.76 2.31 1.32 7.58 2.23 12.70 7.50 4.49 1.17 44 ER8e ExonRegion 0 2.12 0.00 0.00 0.00 1.34 1.83 0.00 0.00 0.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00