Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GEMIN6 Gene 0 56.25 45.67 77.95 51.53 96.81 71.13 68.86 26.61 16.63 70.42 62.18 54.70 35.89 71.57 85.50 61.06 74.86 30.59 33.62 34.04 28.44 29.18 23.90 2 409011 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.12 0.00 0.00 0.00 0.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.11 0.00 0.00 3 281950 Transcript 0 34.93 18.96 172.65 87.00 52.42 36.52 39.43 41.16 21.49 110.62 86.69 65.24 60.35 195.19 208.50 159.33 77.79 51.78 66.65 69.62 23.80 89.21 39.10 4 409566 Transcript 0 8.47 15.79 9.50 9.01 16.27 23.40 6.58 3.91 3.44 9.85 9.50 9.87 11.05 25.31 18.97 18.04 22.85 4.88 12.84 6.75 4.47 5.07 5.90 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.71 0.00 0.00 0.00 1.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.39 0.00 0.00 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.25 0.00 0.00 10 E3_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E3_Ac KnownBoundary 0 3.26 3.35 2.75 0.00 7.64 12.83 18.81 0.00 1.42 0.00 0.00 0.00 0.00 9.65 10.38 7.95 4.21 3.69 0.00 5.88 8.53 2.33 10.93 12 ER3b ExonRegion 0 2.03 3.25 1.62 1.14 4.28 8.51 13.08 0.35 1.43 0.78 0.00 0.00 0.00 8.51 8.36 5.83 3.96 2.14 1.53 2.72 3.35 1.17 5.17 13 ER3c ExonRegion 1 374.21 257.12 113.48 73.75 530.29 400.65 387.53 43.43 30.06 91.54 177.17 3.48 9.91 219.51 203.86 255.98 252.17 99.39 95.61 84.60 52.39 90.59 100.67 14 E3a_E4a KnownJunction 1 557.58 364.54 289.79 166.95 399.58 335.03 343.85 80.34 70.17 195.66 239.01 18.91 55.68 165.34 213.36 381.52 276.39 165.03 176.57 90.57 59.12 125.90 155.28 15 ER4a ExonRegion 1 91.17 51.31 181.01 96.13 80.44 67.68 68.64 57.63 40.11 121.07 184.72 73.75 29.03 129.17 146.48 125.38 197.40 55.33 79.40 67.75 58.45 57.33 50.92 16 E4_Da NovelBoundary 1 3.78 0.00 22.94 17.81 4.33 0.00 3.97 6.98 5.70 22.24 2.16 5.85 0.00 16.19 8.90 76.30 8.13 14.38 7.91 13.74 0.00 14.02 11.95 17 E4a_E5a KnownJunction 0 0.00 3.35 11.29 33.30 0.00 2.38 0.00 14.21 10.19 23.91 16.43 6.15 0.00 65.93 41.91 55.46 20.94 12.27 22.97 14.64 7.91 7.78 22.19 18 E4a_E6a KnownJunction 1 49.64 12.70 304.90 136.88 41.60 37.71 36.92 63.75 32.70 161.14 154.88 85.08 78.57 358.12 383.71 302.31 141.84 94.14 120.85 112.81 39.60 164.66 69.66 19 I4 Intron 0 2.77 3.55 0.80 1.77 20.99 21.58 15.58 4.49 0.00 3.72 0.84 4.66 0.00 5.21 0.00 3.89 4.32 0.81 5.55 2.78 0.00 1.82 2.56 20 I4_SR1 SilentIntronRegion 0 2.79 3.58 0.80 1.79 21.18 21.77 15.72 4.53 0.00 3.76 0.85 4.70 0.00 5.24 0.00 3.92 4.35 0.81 5.60 2.81 0.00 1.83 2.58 21 ER5a ExonRegion 1 3.39 2.99 14.06 25.13 12.59 9.22 4.63 8.13 9.23 18.03 8.30 23.56 14.35 35.99 38.83 32.87 13.40 17.12 11.20 20.06 3.60 10.26 24.27 22 E5_Da KnownBoundary 0 74.09 79.13 32.23 37.56 66.98 36.46 38.73 20.13 23.61 25.12 38.69 44.26 42.21 36.44 38.69 84.25 35.16 39.59 74.07 83.41 36.76 28.41 85.96 23 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER5b ExonRegion 0 9.69 18.35 14.00 12.72 24.57 26.18 10.91 5.27 5.56 14.52 13.78 19.74 15.44 26.08 28.54 15.40 23.36 9.76 21.06 13.50 3.25 4.74 8.56 25 E5_Db NovelBoundary 0 29.86 27.03 45.03 30.30 40.83 51.79 33.03 21.40 39.12 38.12 2.42 12.90 0.00 14.60 6.30 63.91 24.78 39.55 37.18 31.58 16.19 22.53 34.32 26 E5b_E6a KnownJunction 0 7.26 13.22 5.00 5.29 7.98 20.61 2.25 2.55 1.33 5.18 5.21 0.00 6.66 24.55 9.39 20.68 22.35 0.00 4.61 0.00 5.68 5.39 3.24 27 I5 Intron 0 8.13 8.05 15.73 10.88 12.15 10.68 7.86 5.10 1.93 11.14 2.48 5.57 5.04 11.14 8.27 9.00 4.23 2.78 1.85 8.18 0.26 2.91 1.37 28 I5_AR2 ActiveIntronRegion 0 12.95 18.81 27.59 16.34 29.16 23.70 17.30 9.16 3.64 15.76 3.17 7.64 8.13 12.26 10.20 14.28 4.23 3.93 1.27 14.43 0.88 5.81 2.09 29 I5_AR3 ActiveIntronRegion 0 14.92 9.22 24.63 21.27 11.97 3.48 7.86 7.68 2.37 22.23 4.77 12.09 6.41 14.56 12.57 12.33 10.89 2.43 2.71 13.39 0.00 4.39 1.47 30 E6_Aa NovelBoundary 0 40.08 42.23 53.81 32.70 37.78 27.03 14.66 4.31 5.38 29.01 11.79 0.00 6.66 14.60 29.30 8.20 17.86 13.22 4.80 8.50 0.00 3.12 0.00 31 ER6a ExonRegion 0 117.12 96.71 192.90 119.97 209.85 159.10 148.84 60.09 36.10 161.44 141.30 141.33 83.06 167.73 222.37 143.42 181.22 77.04 76.50 67.85 80.14 68.58 50.08 32 E6_Da KnownBoundary 0 59.34 43.68 86.84 84.37 51.53 79.61 64.70 36.02 22.48 106.37 64.28 82.38 74.67 115.96 84.80 25.72 50.40 11.90 22.31 25.89 5.44 35.94 19.04 33 E6_Db KnownBoundary 0 10.89 22.43 34.18 12.99 59.08 23.05 8.70 7.64 0.00 21.57 8.00 25.21 13.15 59.80 19.28 8.29 8.98 1.99 9.51 32.09 0.00 18.43 8.71 34 ER6b ExonRegion 0 23.16 39.09 76.59 62.39 61.69 58.48 36.41 33.13 15.16 90.99 44.24 66.87 54.46 91.49 56.09 18.66 28.97 11.70 16.28 37.35 3.18 31.83 13.70 35 ER6c ExonRegion 1 20.23 25.22 40.40 37.12 63.25 35.34 41.95 18.58 10.29 60.10 18.50 45.39 42.13 32.27 33.28 16.35 13.75 9.42 12.46 26.42 8.01 13.76 8.55 36 IG9_SR2 SilentIntergenicRegion 0 13.23 11.29 30.09 17.26 25.06 38.79 19.74 6.26 6.39 33.79 4.02 6.10 5.33 8.20 9.33 9.28 5.73 9.08 18.22 8.47 3.06 2.89 6.60 37 IG9_AR3 ActiveIntergenicRegion 0 18.42 19.20 76.36 44.66 33.67 15.87 14.87 29.58 19.28 61.64 7.06 7.86 3.11 8.02 12.51 9.95 4.42 13.69 13.49 24.73 4.88 6.74 1.64