Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GALM Gene 0 58.21 7.40 42.18 10.60 20.63 9.80 15.17 19.11 18.51 8.64 11.15 24.38 48.81 3.20 35.25 10.05 7.21 5.20 9.50 8.32 57.14 26.98 25.74 2 272252 Transcript 0 44.91 8.82 23.60 7.33 17.41 8.04 14.02 14.05 10.91 6.66 6.12 13.72 27.04 1.96 23.71 9.68 7.41 5.47 10.21 8.41 29.68 13.64 15.10 3 427858 Transcript 0 6.98 3.39 0.00 0.34 3.86 1.53 4.86 2.70 0.89 0.71 1.29 10.23 7.37 2.61 9.98 3.96 2.20 0.00 4.21 4.61 4.37 1.57 4.40 4 410063 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 427429 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 314287 Transcript 0 17.63 3.12 22.59 4.69 3.90 0.00 1.10 3.29 9.07 0.68 2.53 0.00 0.00 0.00 0.00 0.00 2.06 1.26 0.00 1.47 26.78 8.54 0.00 7 444351 Transcript 0 11.37 0.00 6.58 0.45 5.50 3.01 0.66 3.51 6.43 1.49 0.52 0.85 6.32 0.85 5.04 0.00 0.00 0.00 0.00 0.00 6.95 0.49 5.01 8 434934 Transcript 0 3.34 1.95 5.17 2.28 2.05 0.62 7.12 2.46 4.37 1.97 0.04 0.68 0.74 0.00 1.70 0.00 0.00 0.51 1.19 5.30 2.06 1.69 2.20 9 ER1a ExonRegion 0 8.95 0.00 1.42 0.60 1.59 0.54 4.40 0.00 1.09 0.51 2.99 0.00 0.85 0.00 3.63 4.94 3.11 0.83 4.32 0.00 8.90 3.09 0.89 10 E1_Ab KnownBoundary 0 21.04 0.00 1.80 0.00 0.00 0.00 1.77 0.00 0.00 0.00 4.69 0.00 6.82 0.00 4.45 4.36 3.65 0.00 4.80 0.00 19.65 0.00 0.00 11 ER1b ExonRegion 0 20.87 0.00 9.02 1.25 3.27 0.92 6.36 1.34 2.88 1.72 6.01 0.00 2.48 0.00 19.83 8.09 4.95 2.87 3.80 0.95 50.62 19.62 15.58 12 E1_Ac KnownBoundary 0 6.82 0.00 3.49 0.00 0.00 0.00 2.03 0.00 1.50 0.00 7.69 0.00 0.00 0.00 19.78 0.00 0.00 2.57 4.80 0.00 35.71 24.37 16.56 13 E1_Ad KnownBoundary 0 63.05 0.00 18.69 1.33 8.40 2.90 28.09 4.60 6.86 4.65 5.16 0.00 13.47 0.00 40.55 37.34 4.77 2.57 0.00 3.26 89.39 25.66 42.34 14 ER1c ExonRegion 0 47.80 0.34 17.16 1.36 8.03 6.11 18.65 3.46 5.25 3.44 6.12 2.53 9.38 0.00 51.98 23.53 4.95 3.70 4.25 2.13 93.11 36.46 43.80 15 ER1d ExonRegion 0 32.32 0.87 10.15 2.52 7.49 5.34 11.82 3.47 8.32 2.92 5.90 1.52 4.90 0.31 23.49 11.63 2.11 2.22 4.67 1.38 50.01 14.04 15.66 16 E1_Ae KnownBoundary 0 3.63 0.00 5.62 1.93 8.66 4.66 4.20 9.28 7.26 0.00 5.16 0.00 6.82 2.47 5.44 7.86 0.00 1.87 0.00 0.00 50.78 9.25 3.41 17 ER1e ExonRegion 0 13.09 0.00 18.85 5.58 6.59 0.49 1.95 7.91 12.53 2.27 9.13 3.17 15.85 1.34 39.35 7.05 7.27 3.68 2.77 1.20 86.21 31.39 23.90 18 E1a_E2a KnownJunction 0 14.37 0.00 20.76 12.92 0.00 0.00 0.00 7.02 20.37 8.60 7.79 7.35 33.28 2.47 54.02 11.19 4.39 2.36 3.67 8.95 51.65 31.72 52.93 19 E1a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER2a ExonRegion 0 24.26 1.40 31.10 7.17 19.46 7.42 12.08 12.51 17.64 6.68 12.46 16.28 34.52 1.37 33.04 9.07 5.69 2.62 4.95 2.95 79.60 28.39 20.18 21 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 3.57 0.00 0.00 2.55 0.00 1.67 0.00 6.15 0.00 0.00 12.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E2a_E4a KnownJunction 1 52.82 0.00 46.07 11.32 12.65 10.05 6.23 14.46 24.65 3.87 19.95 12.60 82.14 0.00 40.92 8.20 0.00 2.57 7.91 5.82 91.62 28.96 27.32 23 ER3a ExonRegion 0 13.99 10.17 0.00 1.03 8.00 4.58 9.93 1.78 2.66 0.46 3.87 24.53 9.61 7.83 17.32 8.89 6.60 0.00 12.62 13.83 8.79 2.27 13.21 24 E3_Da NovelBoundary 0 55.79 128.79 102.57 141.17 44.82 13.63 107.76 114.06 124.62 67.42 14.32 28.36 13.15 9.42 44.50 51.70 36.84 89.83 50.54 59.00 14.64 8.02 29.88 25 E3a_E4a KnownJunction 0 6.96 0.00 0.00 0.00 0.00 0.00 4.64 3.78 0.00 0.00 0.00 0.00 12.50 0.00 0.00 2.99 0.00 0.00 0.00 0.00 4.32 2.45 0.00 26 E4_Ab NovelBoundary 0 34.23 3.03 22.12 3.40 0.00 2.50 5.92 11.46 15.62 6.34 3.79 5.25 39.45 2.47 24.11 7.69 7.67 0.00 0.00 0.00 41.95 23.45 21.00 27 ER4a ExonRegion 1 48.94 2.03 37.53 6.98 8.86 11.12 8.44 16.20 24.63 6.81 16.31 17.59 80.02 2.23 46.78 11.70 5.36 3.12 5.18 4.26 80.57 31.12 25.70 28 ER4b ExonRegion 0 67.05 1.15 34.63 8.95 12.47 17.30 7.69 19.24 26.57 10.45 16.45 26.55 66.19 2.11 47.68 12.39 14.64 4.01 4.03 3.29 87.44 43.36 26.65 29 E4_Da KnownBoundary 0 92.02 0.00 45.39 14.32 12.73 9.31 14.22 19.80 24.59 12.44 19.43 43.21 67.20 0.00 34.24 19.65 15.90 1.78 8.38 3.13 81.79 43.84 34.91 30 ER4c ExonRegion 0 73.97 2.30 53.57 11.11 7.31 1.62 16.64 15.82 25.75 8.45 13.18 40.55 79.57 2.84 34.33 13.67 10.56 2.43 5.15 1.52 101.44 50.42 17.77 31 E4_Db KnownBoundary 0 132.62 9.74 62.83 9.29 7.98 2.50 10.11 8.91 26.42 3.55 12.27 17.56 69.80 2.12 18.67 3.85 4.21 0.00 7.81 3.26 105.27 41.94 13.91 32 E4b_E4c KnownJunction 0 35.27 6.25 45.18 9.39 7.81 0.00 2.21 6.57 18.14 1.37 5.05 0.00 0.00 0.00 0.00 0.00 4.11 2.53 0.00 2.94 53.56 17.08 0.00 33 ER4d ExonRegion 0 88.89 6.10 60.04 8.18 8.03 1.83 9.27 15.56 27.17 4.59 11.60 21.65 70.35 1.62 20.31 11.89 6.60 2.77 9.56 2.13 103.57 40.63 14.68 34 ER4e ExonRegion 1 97.99 6.10 55.69 8.52 10.84 1.83 9.66 14.35 29.83 2.81 13.63 13.64 66.83 0.81 18.28 10.55 6.11 1.85 6.37 2.23 90.35 35.63 17.33 35 E4_Dd NovelBoundary 0 168.03 6.51 58.45 16.71 15.62 0.00 7.99 22.71 30.21 8.60 21.58 63.62 73.70 4.94 58.97 11.45 9.54 1.95 3.58 3.26 102.80 38.52 32.35 36 ER4f ExonRegion 0 107.94 4.75 51.87 8.18 10.70 1.83 7.94 14.98 29.23 3.06 13.53 21.65 75.04 3.25 26.11 12.88 6.60 1.85 6.37 4.26 95.49 38.89 20.56 37 ER4g ExonRegion 0 111.07 4.60 57.81 10.96 11.28 1.04 6.27 16.01 28.14 6.23 19.24 37.84 71.37 3.25 43.14 14.47 9.76 1.85 7.34 2.22 93.23 32.07 26.17 38 E4e_E7a KnownJunction 0 104.17 0.00 55.44 17.88 39.64 7.95 8.66 17.91 21.24 11.34 23.32 24.16 94.64 2.47 40.42 7.60 4.02 1.95 8.47 0.00 61.53 35.52 47.38 39 ER4h ExonRegion 0 108.37 4.07 56.12 10.90 18.20 0.00 5.56 16.94 25.20 8.03 19.72 43.29 90.05 3.25 52.22 11.89 6.60 1.85 6.37 2.13 90.35 35.42 27.60 40 ER4i ExonRegion 0 106.16 3.90 52.94 13.52 19.27 2.42 6.46 20.95 23.66 7.84 22.96 35.50 87.61 2.92 47.58 9.51 6.60 2.00 6.37 1.87 79.60 33.00 32.07 41 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER7a ExonRegion 0 100.20 2.41 58.53 15.71 28.78 6.62 14.97 19.16 24.72 8.14 20.32 24.39 84.82 4.89 37.79 10.40 6.28 2.50 3.07 1.25 91.99 43.35 28.61 44 E7a_E8a KnownJunction 0 20.15 0.00 8.46 0.00 12.73 0.00 0.00 4.97 11.11 0.00 0.00 0.00 8.12 2.35 9.27 0.00 0.00 0.00 0.00 0.00 5.81 0.00 6.66 45 E7a_E9a KnownJunction 0 34.97 6.71 71.73 14.12 21.65 2.67 11.66 21.32 37.12 6.55 11.69 37.21 79.70 6.83 35.97 15.89 8.60 0.00 7.91 0.00 93.84 65.83 24.84 46 ER8a ExonRegion 0 7.30 0.00 5.85 1.34 3.77 9.04 1.98 3.58 5.27 2.79 1.55 2.56 4.03 0.21 1.39 0.00 0.00 0.00 0.00 0.00 9.84 1.47 4.01 47 E8_Da NovelBoundary 0 13.78 0.00 25.78 21.21 8.32 10.33 57.32 1.81 8.33 36.75 14.69 18.76 20.78 0.00 0.00 0.00 26.55 54.35 12.33 41.74 3.15 0.00 0.00 48 E8a_E9a KnownJunction 0 6.67 0.00 5.44 0.00 0.00 0.00 0.00 1.97 2.92 1.67 0.00 0.00 6.82 0.00 4.45 0.00 0.00 0.00 0.00 0.00 5.19 0.00 4.35 49 I8_AR1 ActiveIntronRegion 0 16.94 6.05 14.38 7.27 10.26 1.34 12.71 7.33 6.71 8.72 4.10 4.40 12.03 1.14 5.13 5.90 4.59 15.66 2.53 12.54 4.23 1.52 2.72 50 I8_AR5 ActiveIntronRegion 0 13.44 4.75 7.93 3.50 4.40 0.30 2.39 0.80 4.04 2.04 0.00 3.38 9.30 0.00 2.64 3.07 0.00 0.00 0.00 0.51 1.86 1.16 0.84 51 I8_AR6 ActiveIntronRegion 0 4.72 9.39 16.12 9.44 0.00 1.83 0.10 1.06 10.64 5.73 0.00 8.66 22.37 0.00 8.48 2.97 0.00 0.00 0.00 4.58 2.20 4.17 2.71 52 E9_Aa NovelBoundary 0 38.08 0.00 23.27 5.89 14.09 0.00 20.27 18.15 4.89 7.87 0.00 0.00 13.47 0.00 0.00 4.27 0.00 0.00 0.00 8.63 0.00 2.76 0.00 53 ER9a ExonRegion 0 36.83 8.19 80.78 13.22 21.20 7.04 21.22 23.01 27.91 12.50 16.51 42.84 93.04 5.33 41.37 10.15 5.76 5.07 10.21 9.17 77.52 61.55 49.80 54 E9_Da NovelBoundary 1 46.53 6.05 30.31 12.52 6.88 5.34 19.12 13.47 9.81 1.64 2.68 6.30 94.47 2.47 0.00 4.27 0.00 0.00 0.00 8.82 19.46 3.06 25.61 55 E9a_E10a KnownJunction 0 63.49 0.00 64.31 10.02 17.32 10.73 10.78 22.51 23.03 10.80 15.32 36.16 81.98 7.71 63.66 7.35 0.00 7.96 19.01 0.00 97.86 83.16 50.45 56 I9 Intron 0 33.58 2.65 15.83 4.95 4.85 2.18 6.75 8.90 5.63 2.13 1.53 7.07 14.74 0.68 6.96 2.53 2.06 2.03 1.08 3.98 9.87 3.31 6.82 57 I9_SR1 SilentIntronRegion 0 33.69 2.66 15.88 4.96 4.87 2.19 6.77 8.93 5.65 2.14 1.54 7.10 14.79 0.68 6.98 2.53 2.06 2.04 1.09 3.99 9.90 3.32 6.85 58 E10_Aa NovelBoundary 0 27.63 0.00 13.93 7.82 15.45 2.27 15.81 15.03 11.89 0.00 0.00 18.31 12.34 0.00 4.45 0.00 0.00 4.48 0.00 0.00 9.27 8.57 16.22 59 ER10a ExonRegion 0 53.16 4.49 54.08 8.32 17.43 10.92 14.41 20.03 25.39 6.26 23.51 42.98 68.42 2.34 39.55 7.74 5.19 2.28 8.29 4.35 100.66 36.55 23.49 60 E10_Da KnownBoundary 0 88.39 0.00 42.02 9.92 51.27 8.01 24.11 24.60 22.02 4.08 14.42 52.52 89.28 0.00 26.70 0.00 4.11 2.57 4.80 11.25 46.39 23.09 19.55 61 ER10b ExonRegion 0 190.35 2.93 49.62 14.18 31.33 5.40 16.17 27.22 24.07 8.18 22.15 45.92 70.48 2.72 45.31 12.17 6.48 7.58 10.33 6.36 110.35 42.47 51.35 62 E10_Db NovelBoundary 0 3.26 0.00 22.38 10.69 0.00 0.00 2.03 13.27 1.71 1.26 0.00 6.30 0.00 0.00 0.00 0.00 0.00 11.40 0.00 3.07 0.00 0.00 4.35 63 E10b_E11a KnownJunction 1 82.16 0.00 30.51 6.89 11.38 0.00 5.96 10.97 15.22 5.78 5.05 93.48 33.11 5.12 69.84 6.32 4.68 4.44 11.48 0.00 57.82 37.54 37.56 64 E10b_E12a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.82 0.00 65 E11_Aa NovelBoundary 0 2.96 3.03 16.06 8.22 3.82 0.00 3.93 4.48 4.31 3.17 7.11 0.00 0.00 0.00 0.00 3.59 4.58 1.99 0.00 6.33 0.00 0.00 3.93 66 ER11a ExonRegion 0 62.08 4.21 75.11 17.00 25.47 15.78 14.08 29.27 26.26 12.53 15.90 37.79 77.31 5.27 47.28 8.49 6.20 5.21 10.56 6.79 62.15 35.66 34.19 67 E11_Da KnownBoundary 0 104.91 0.00 86.96 12.69 37.10 21.01 13.12 46.33 20.25 10.23 18.16 24.61 68.02 2.41 36.96 12.56 4.30 2.03 11.01 8.82 56.84 14.14 44.64 68 ER11b ExonRegion 0 80.87 17.65 45.78 14.06 33.23 15.54 23.65 28.10 20.73 12.82 9.26 27.44 53.23 3.92 43.79 14.42 11.70 10.11 16.10 16.81 50.46 24.18 29.32 69 E11_Db NovelBoundary 0 11.85 9.34 14.43 7.39 0.00 0.00 6.27 20.91 11.00 12.65 0.00 0.00 0.00 0.00 4.45 0.00 4.77 4.48 4.24 3.20 0.00 2.57 4.18 70 ER12a ExonRegion 0 2.90 3.90 10.35 4.56 4.10 1.24 14.24 4.93 7.24 3.93 0.09 1.37 1.48 0.00 3.40 0.00 0.00 1.03 2.37 10.61 4.13 0.56 4.39 71 IG7 Intergenic 0 7.04 9.56 13.47 10.43 11.81 4.78 16.38 4.66 7.46 6.80 2.38 0.88 2.35 1.74 3.90 1.51 4.30 12.09 6.45 12.16 2.23 1.21 6.59 72 IG7_SR1 SilentIntergenicRegion 0 7.06 9.59 13.51 10.46 11.84 4.79 16.42 4.67 7.48 6.82 2.38 0.89 2.36 1.75 3.91 1.51 4.31 12.13 6.47 12.19 2.24 1.21 6.60