Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	MSH6	Gene	0	105.34	283.82	208.12	229.22	206.86	155.55	341.44	157.34	90.16	260.19	343.85	203.26	130.23	216.66	121.67	203.41	269.78	222.12	144.06	237.77	86.70	96.16	91.73
2	446255	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	445503	Transcript	0	0.00	0.00	3.61	2.06	0.00	0.00	8.04	0.00	3.07	0.00	6.84	0.00	0.00	0.00	0.00	0.00	4.77	4.52	0.00	0.00	0.00	3.12	0.00
4	234420	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	456246	Transcript	0	0.00	0.00	0.00	0.00	0.00	5.79	2.25	0.00	0.00	1.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.60	0.00	0.00	0.00	0.00	0.00
6	493177	Transcript	0	5.52	6.90	5.80	6.78	4.75	3.64	12.42	3.76	3.16	7.30	1.92	5.58	6.23	1.62	5.28	5.88	6.02	9.96	11.45	9.66	2.99	2.28	4.89
7	455383	Transcript	0	1.11	0.03	1.93	0.80	0.35	1.11	0.35	0.35	0.73	0.92	1.73	0.00	1.06	0.03	0.54	0.00	2.21	1.49	2.11	1.73	1.18	0.00	0.77
8	420813	Transcript	0	0.36	0.36	1.23	0.35	0.00	0.00	1.79	0.00	0.93	0.30	0.67	1.20	0.00	0.24	0.35	0.52	1.09	1.25	0.54	3.23	5.42	0.35	2.73
9	411819	Transcript	0	0.93	0.05	0.05	0.00	0.00	0.00	0.05	0.00	0.00	0.00	0.00	0.07	0.00	0.04	0.90	0.00	1.45	0.00	0.00	1.80	0.00	0.00	0.00
10	ER1a	ExonRegion	0	0.00	0.35	0.00	0.00	1.71	1.60	2.45	1.65	0.71	0.32	0.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	1.73	0.00	1.12
11	E1_Ab	KnownBoundary	0	0.00	2.50	0.00	0.00	7.64	5.11	9.80	1.89	0.00	0.00	2.37	0.00	0.00	0.00	0.00	3.50	0.00	3.73	0.00	2.88	5.93	0.00	3.50
12	ER1b	ExonRegion	0	4.74	14.09	1.87	6.17	15.29	33.01	42.46	8.15	6.18	16.52	39.12	0.00	0.00	25.17	11.67	31.70	46.53	7.87	13.65	25.43	20.36	3.13	15.80
13	E1_Ac	KnownBoundary	1	24.00	48.87	6.30	22.27	52.46	109.82	147.90	17.87	16.03	49.29	147.77	13.05	0.00	108.36	54.89	132.53	183.36	138.29	61.65	93.77	67.83	12.68	30.90
14	ER1c	ExonRegion	1	8.13	30.13	20.06	17.86	16.96	42.50	56.01	18.73	16.86	77.65	120.36	8.36	3.33	91.18	25.73	84.24	130.79	106.92	36.83	96.38	54.74	20.12	37.29
15	E1a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E1a_E6a	KnownJunction	1	14.37	92.55	26.88	29.23	46.60	71.95	204.08	28.71	31.92	119.40	162.51	0.00	12.82	136.03	33.25	77.50	151.94	157.52	32.47	114.67	118.74	37.72	48.32
17	E1a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.79	2.25	0.00	0.00	1.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.60	0.00	0.00	0.00	0.00	0.00
18	ER2a	ExonRegion	0	2.23	0.05	3.86	1.61	0.70	0.00	0.71	0.70	1.45	1.83	0.78	0.00	2.13	0.05	1.08	0.00	4.42	2.98	4.22	3.47	2.36	0.00	1.54
19	E2a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.21	0.00	0.00	0.00	0.00	2.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER3a	ExonRegion	0	0.71	0.71	2.47	0.70	0.00	0.00	3.58	0.00	1.86	0.59	1.33	2.41	0.00	0.47	0.69	1.04	2.19	2.50	1.08	6.45	3.31	0.70	2.14
21	E3a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.54	0.00	3.33
22	ER4a	ExonRegion	0	1.86	0.11	0.11	0.00	0.00	0.00	0.09	0.00	0.00	0.00	0.00	0.15	0.00	0.08	1.80	0.00	2.90	0.00	0.00	3.59	0.00	0.00	0.00
23	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER5a	ExonRegion	0	11.04	13.79	11.61	13.55	9.49	7.27	24.84	7.51	6.33	14.61	3.84	11.16	12.46	3.24	10.55	11.77	12.04	19.91	22.90	19.32	5.98	4.56	9.78
25	E5_Da	NovelBoundary	1	533.87	380.52	949.67	936.41	375.04	269.73	468.04	1154.06	983.96	854.32	232.32	33.46	54.38	62.75	127.20	399.64	398.97	1266.77	507.50	542.91	426.63	287.61	469.84
26	I5_AR1	ActiveIntronRegion	0	18.10	29.68	46.44	52.23	22.80	9.14	52.53	34.80	21.99	33.20	4.18	8.79	12.52	2.56	5.52	8.97	11.33	16.96	18.56	39.53	2.21	2.58	8.63
27	Ix	Intron	0	19.47	35.63	33.18	55.22	34.16	15.79	36.87	38.38	27.32	31.15	1.61	9.48	14.92	3.39	11.58	9.88	6.08	15.13	12.11	24.51	1.70	13.36	8.20
28	Ix_AR1	ActiveIntronRegion	0	16.32	36.78	27.61	42.15	25.39	7.61	25.12	38.95	20.19	29.39	1.15	10.42	16.77	3.12	11.08	5.29	4.89	3.81	14.19	20.82	0.64	11.12	7.84
29	Ix_SR1	SilentIntronRegion	0	20.96	37.82	36.74	62.43	38.89	18.17	40.20	37.72	31.45	29.18	1.63	9.59	15.28	3.28	12.17	9.53	6.61	18.10	11.16	24.92	1.86	15.41	8.34
30	Ix_AR2	ActiveIntronRegion	0	17.84	26.19	26.63	44.04	26.99	16.78	38.82	40.80	20.40	41.45	2.11	8.04	11.46	4.19	10.03	17.03	5.52	17.65	13.40	27.78	2.41	8.33	8.22
31	ER6a	ExonRegion	0	40.78	175.54	94.29	111.72	96.25	109.98	225.07	100.45	70.98	214.81	296.91	84.52	73.99	221.19	66.12	154.73	255.06	252.17	83.64	247.93	131.42	67.33	82.57
32	E6a_E7a	KnownJunction	1	58.97	146.75	103.75	119.07	101.19	65.53	252.74	129.18	68.49	237.16	370.57	137.89	153.89	291.96	65.76	150.13	317.62	266.50	144.76	243.08	142.95	95.71	160.91
33	E6a_E8a	KnownJunction	0	0.00	0.00	3.61	2.06	0.00	0.00	8.04	0.00	3.07	0.00	6.84	0.00	0.00	0.00	0.00	0.00	4.77	4.52	0.00	0.00	0.00	3.12	0.00
34	Ix	Intron	0	20.74	43.04	26.65	44.57	46.01	15.69	44.00	23.31	20.01	24.80	3.59	6.93	12.18	3.42	9.57	12.04	9.83	19.37	25.40	26.04	3.91	10.50	14.69
35	Ix_SR1	SilentIntronRegion	0	20.81	43.18	26.73	44.72	46.16	15.75	44.14	23.39	20.08	24.88	3.60	6.95	12.22	3.44	9.60	12.08	9.86	19.43	25.49	26.12	3.93	10.54	14.73
36	ER7a	ExonRegion	0	42.48	176.76	135.04	161.91	134.24	108.36	245.37	139.11	97.93	235.87	365.59	228.55	155.49	256.62	81.52	195.23	336.46	255.16	124.52	296.98	113.64	88.19	87.44
37	E7_Da	NovelBoundary	1	83.42	262.12	142.75	166.98	120.54	134.52	342.00	159.74	87.15	274.69	300.39	273.84	231.80	287.60	63.66	186.79	270.87	201.38	108.33	283.98	99.71	77.03	64.96
38	E7b_E8a	KnownJunction	1	63.12	246.93	117.50	121.26	85.91	116.18	253.23	111.11	79.80	240.15	398.31	329.21	241.70	365.36	108.17	133.55	388.03	233.71	147.30	304.37	98.10	84.81	81.44
39	ER7b	ExonRegion	1	61.61	216.76	113.60	133.36	91.67	103.58	251.31	123.30	84.03	240.17	358.02	295.05	231.37	315.68	83.81	150.70	335.96	225.49	119.98	274.31	91.98	74.47	76.68
40	ER8a	ExonRegion	1	46.94	200.73	126.57	123.06	77.91	108.63	227.95	105.74	87.11	224.66	406.02	342.79	221.26	310.11	84.31	137.42	376.50	236.19	124.79	313.89	86.07	76.11	77.22
41	ER8b	ExonRegion	0	38.14	218.48	139.25	147.97	121.03	132.07	281.13	136.70	101.24	229.34	355.56	330.51	215.24	277.71	75.26	240.74	347.78	283.03	117.70	322.93	85.47	92.67	77.78
42	E8_Db	KnownBoundary	0	13.78	83.67	45.30	71.79	47.28	76.04	114.38	55.29	48.76	101.00	94.18	80.73	51.13	77.64	6.18	103.48	144.55	132.65	65.79	104.50	39.04	47.64	36.45
43	E8_Dc	KnownBoundary	0	17.86	99.59	77.85	93.83	82.60	57.69	144.85	73.81	67.16	127.38	194.58	118.24	54.54	67.93	10.38	98.26	156.15	157.40	71.34	137.74	51.83	58.60	38.16
44	ER8c	ExonRegion	1	33.86	204.71	138.88	188.53	147.17	132.64	250.67	149.22	121.86	248.88	358.23	365.12	237.63	268.52	50.29	238.76	342.19	330.75	157.14	297.16	101.37	102.79	96.91
45	ER8d	ExonRegion	1	48.18	209.35	136.43	192.15	141.27	133.11	296.39	150.57	116.26	279.48	463.60	379.90	228.51	312.04	72.66	273.71	401.90	451.91	154.53	348.25	125.00	109.58	115.42
46	E8_Dd	KnownBoundary	1	80.68	365.46	125.13	221.72	198.64	132.25	328.61	119.32	137.15	327.77	430.16	417.74	225.96	320.03	57.23	387.93	463.02	515.39	299.21	348.16	130.10	113.53	180.46
47	ER8e	ExonRegion	0	70.10	253.71	162.46	215.98	183.64	160.36	373.19	145.53	118.42	312.63	510.74	250.24	174.36	298.87	93.88	307.19	402.89	399.95	183.23	352.61	139.07	124.60	142.38
48	ER8f	ExonRegion	0	61.64	210.73	189.47	259.97	175.26	166.19	398.84	179.76	135.55	333.46	663.47	317.13	201.67	289.09	115.69	348.48	517.00	235.82	169.62	384.31	103.02	188.56	118.93
49	ER8g	ExonRegion	0	133.77	405.19	253.72	315.96	300.52	236.45	529.69	215.10	123.54	360.75	490.00	325.40	210.20	316.12	151.63	290.91	386.59	267.48	212.35	293.11	108.13	134.49	128.63
50	E8_Df	NovelBoundary	0	13.48	55.98	58.90	87.43	46.52	14.14	98.04	54.05	48.49	38.47	11.79	49.22	34.74	12.07	19.66	8.54	38.99	42.66	39.62	79.96	9.14	5.76	22.96
51	E8f_E9a	KnownJunction	0	161.36	452.75	412.85	365.12	280.65	184.89	428.33	200.07	89.29	368.33	401.36	178.71	107.79	233.39	174.67	179.53	266.76	195.99	177.42	285.07	130.41	140.53	84.51
52	Ix	Intron	0	87.32	120.86	63.33	99.80	119.97	55.78	111.10	65.74	50.15	59.66	19.01	32.28	38.88	16.85	26.96	30.45	27.24	39.35	39.85	58.83	9.59	26.16	27.02
53	Ix_SR1	SilentIntronRegion	0	22.00	29.36	28.68	52.95	54.76	18.76	63.56	30.13	23.22	23.74	10.95	18.67	20.88	9.65	17.25	19.55	24.70	15.62	27.37	39.26	8.46	6.45	17.71
54	Ix_AR1	ActiveIntronRegion	0	104.40	145.57	80.12	122.23	150.31	63.60	147.56	92.68	62.18	82.30	20.77	55.48	65.67	20.27	31.10	33.86	28.22	33.93	29.68	71.60	4.85	33.44	32.69
55	Ix_SR2	SilentIntronRegion	0	15.24	59.18	12.87	12.67	27.56	23.29	24.89	4.84	7.04	8.03	4.83	1.73	4.22	2.76	2.90	8.62	3.96	5.54	3.19	8.51	0.00	7.29	4.40
56	Ix_AR2	ActiveIntronRegion	0	115.97	159.43	71.99	112.28	137.40	73.56	111.51	66.17	57.92	63.90	23.07	21.07	27.40	18.84	30.20	35.11	28.74	60.45	58.16	61.49	14.88	32.83	28.62
57	E9_Aa	NovelBoundary	0	50.08	79.06	67.56	94.93	108.15	99.03	84.53	70.89	70.14	100.14	27.11	19.66	39.61	19.25	15.20	39.39	53.76	48.00	60.99	93.89	17.30	17.57	47.63
58	ER9a	ExonRegion	0	247.34	595.14	408.77	403.21	420.40	325.11	537.15	269.17	139.25	395.34	387.71	188.92	127.07	305.78	259.73	281.02	298.46	366.42	262.55	337.55	138.25	158.41	130.95
59	E9_Da	NovelBoundary	0	344.06	253.05	56.80	205.70	238.29	180.24	191.49	118.87	100.55	124.64	17.21	46.07	18.67	21.43	46.85	80.06	33.94	115.99	96.94	127.96	19.65	124.43	91.25
60	E9a_E10a	KnownJunction	0	364.51	740.46	294.55	353.37	256.54	198.41	440.30	211.65	100.58	350.12	384.04	155.30	94.31	154.75	206.56	172.60	287.89	281.39	125.18	257.01	105.58	111.08	81.52
61	Ix	Intron	0	40.88	66.41	42.34	75.28	74.72	55.84	73.15	43.39	47.33	49.37	8.63	23.94	21.09	8.98	12.65	20.47	15.81	34.49	35.99	59.75	10.66	36.32	28.12
62	Ix_AR1	ActiveIntronRegion	0	40.96	66.55	42.43	75.44	74.87	55.96	73.30	43.48	47.43	49.48	8.65	23.99	21.13	9.00	12.68	20.51	15.84	34.56	36.06	59.87	10.69	36.39	28.18
63	E10_Aa	NovelBoundary	0	17.26	64.26	52.30	107.75	79.54	57.01	94.29	54.83	50.03	53.19	7.58	20.71	55.35	15.66	9.77	15.04	16.18	66.37	46.59	62.89	16.06	26.45	23.90
64	ER10a	ExonRegion	1	326.88	751.55	428.83	472.47	459.98	313.94	604.65	280.95	123.52	435.31	437.59	139.31	70.23	252.23	298.19	244.22	301.47	305.61	206.91	372.07	126.60	136.95	147.13
65	E10_Da	NovelBoundary	0	76.75	88.41	64.72	116.97	144.48	47.87	100.34	71.67	43.84	53.35	6.11	36.16	7.63	23.78	11.37	12.65	4.21	32.13	36.24	65.64	17.05	46.11	36.71
66	E10a_E11a	KnownJunction	1	543.28	637.39	555.27	506.53	813.75	382.28	970.34	344.04	119.18	489.69	439.06	198.66	56.98	331.57	438.97	273.18	329.59	201.05	255.35	382.74	131.52	228.52	180.46
67	Ix	Intron	0	20.22	34.09	20.73	41.36	50.15	33.38	57.02	27.83	25.54	22.79	3.83	23.09	20.93	12.65	11.99	16.07	10.11	26.34	24.11	44.09	10.33	18.40	20.11
68	Ix_AR1	ActiveIntronRegion	0	20.36	34.32	20.88	41.65	50.51	33.62	57.43	28.02	25.71	22.95	3.85	23.25	21.08	12.74	12.08	16.18	10.18	26.52	24.28	44.41	10.40	18.53	20.25
69	E11_Aa	NovelBoundary	0	13.26	50.25	30.13	88.73	96.69	43.33	113.81	39.43	30.41	23.91	2.68	31.21	6.49	7.71	8.78	14.87	4.21	10.74	18.26	20.77	10.63	11.82	11.18
70	ER11a	ExonRegion	0	348.17	630.68	693.46	681.64	570.14	325.36	797.69	385.58	136.80	488.30	481.87	238.75	137.37	282.92	351.37	300.25	327.60	219.12	244.95	401.80	100.15	203.19	169.38
71	E11_Da	NovelBoundary	0	76.53	109.52	61.26	102.62	85.48	59.40	130.72	72.95	51.65	49.91	4.95	30.61	47.56	9.89	25.96	27.94	21.79	21.56	26.35	73.70	8.90	39.37	27.15
72	E11a_E12a	KnownJunction	0	356.51	705.47	806.48	704.71	457.89	256.44	734.25	405.36	108.59	428.93	347.98	166.10	144.80	272.30	310.90	246.09	274.61	289.05	257.04	312.30	43.80	124.73	133.42
73	Ix	Intron	0	28.16	36.30	45.37	63.32	54.88	36.80	60.04	37.73	30.41	30.53	9.64	30.66	36.95	8.03	10.05	14.50	19.76	18.16	13.42	49.54	6.35	23.33	20.51
74	Ix_AR2	ActiveIntronRegion	0	29.39	47.53	47.10	72.37	55.91	48.83	65.98	42.19	31.42	33.24	10.49	36.05	28.47	7.68	6.96	10.60	21.41	14.57	17.48	49.84	7.10	28.80	21.88
75	Ix_SR1	SilentIntronRegion	0	47.75	36.96	54.17	99.73	90.03	49.24	108.76	65.63	41.41	44.29	11.26	37.95	61.80	7.02	13.74	22.47	23.11	20.76	27.64	65.52	11.15	27.15	27.81
76	Ix_AR3	ActiveIntronRegion	0	28.04	33.29	48.70	62.17	54.26	31.92	58.79	36.67	31.71	30.70	10.24	31.22	41.71	9.24	12.03	16.81	21.02	20.84	11.31	53.31	5.88	22.48	21.49
77	E12_Aa	NovelBoundary	0	54.82	41.18	46.04	86.64	70.71	23.23	82.19	30.07	41.03	38.63	2.00	31.66	19.15	14.42	4.45	15.12	26.74	19.90	13.37	56.57	0.00	34.35	18.61
78	ER12a	ExonRegion	0	343.67	729.31	656.27	598.30	490.35	216.01	595.06	397.29	143.52	454.68	529.99	275.33	153.11	234.45	338.40	251.88	302.81	177.05	213.75	344.91	70.66	171.60	115.93
79	E12_Da	NovelBoundary	1	132.17	132.15	78.26	122.89	118.17	70.47	126.66	60.09	43.63	59.98	27.69	24.46	67.53	12.30	42.40	23.93	16.64	31.46	25.88	82.39	15.20	32.76	19.72
80	E12a_E13a	KnownJunction	0	751.10	1163.81	808.34	671.34	793.29	244.69	735.75	483.61	132.81	492.06	590.62	360.57	254.04	278.00	289.14	393.66	414.68	192.39	366.22	336.08	109.78	179.78	118.48
81	Ix	Intron	0	24.35	41.24	16.04	20.05	41.06	27.13	49.37	12.60	13.08	10.31	9.50	17.74	25.87	5.45	11.89	13.04	16.26	11.15	27.88	44.34	1.21	14.83	24.00
82	Ix_AR1	ActiveIntronRegion	0	26.76	45.24	17.75	22.02	45.09	30.40	55.05	13.49	14.53	10.90	10.55	20.04	29.18	6.10	12.54	14.35	17.89	12.52	31.15	49.62	1.36	16.26	27.19
83	E13_Aa	NovelBoundary	0	86.90	105.24	93.88	88.60	223.60	94.77	221.30	54.59	44.79	65.46	20.32	41.86	54.70	9.54	9.39	19.74	39.74	35.77	13.37	60.15	11.74	11.82	29.36
84	ER13a	ExonRegion	0	248.72	444.41	606.65	498.41	434.66	195.13	485.92	360.43	149.52	445.31	422.72	299.23	160.07	197.82	308.90	216.82	260.82	132.72	172.68	287.71	66.11	138.75	65.50
85	E13_Da	NovelBoundary	0	38.67	46.44	63.42	88.73	78.18	26.01	84.70	52.66	39.00	37.90	7.90	12.30	15.10	13.54	8.90	16.58	8.32	13.93	12.99	58.93	0.00	28.17	11.78
86	E13a_E14a	KnownJunction	0	130.32	276.14	589.60	346.84	207.22	65.93	324.42	313.60	111.98	454.40	343.14	196.26	82.30	152.28	269.24	165.51	173.82	79.84	156.90	220.71	54.06	160.25	40.38
87	ER14a	ExonRegion	1	105.55	162.00	237.98	158.53	100.94	69.25	140.85	104.18	47.14	166.71	140.83	99.70	26.99	57.95	126.93	62.47	63.02	35.68	46.92	93.18	20.07	47.91	18.04