Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 QPCT Gene 0 9.68 18.76 75.39 47.86 30.24 242.93 27.43 37.60 52.98 32.94 0.00 2.55 0.53 1.60 0.08 2.39 10.75 28.07 11.38 15.66 226.50 215.44 155.53 2 338415 Transcript 0 7.33 10.51 71.39 39.94 22.13 153.48 18.02 31.91 51.60 29.62 0.00 5.74 0.22 0.17 0.00 2.99 12.63 23.60 8.91 13.14 296.18 160.53 77.29 3 404976 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 470075 Transcript 0 0.28 0.00 0.57 0.79 0.00 3.07 0.00 0.34 0.48 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.45 0.00 0.00 0.00 3.44 0.54 2.17 5 427681 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 480050 Transcript 0 0.00 0.00 0.00 0.00 0.00 1.70 0.00 0.71 0.00 0.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.08 0.00 0.03 7 469098 Transcript 0 1.12 0.78 5.34 2.40 1.65 7.80 1.11 2.77 3.69 2.05 0.00 0.04 0.00 0.01 0.00 0.05 0.24 0.79 0.29 0.48 10.38 5.91 4.46 8 444022 Transcript 0 0.14 0.01 0.12 0.01 0.00 0.25 0.00 0.00 0.37 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.29 0.21 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.46 5.63 2.24 3.75 4.59 116.64 9.83 0.88 2.48 2.90 0.00 0.00 0.00 0.00 0.00 0.64 4.06 12.41 2.28 4.38 126.50 86.36 113.28 11 E1_Ac KnownBoundary 0 10.37 12.89 1.83 4.06 0.00 93.18 6.76 2.55 0.00 1.05 0.00 0.00 0.00 0.00 0.00 4.36 0.00 12.39 4.80 9.33 83.21 28.11 60.78 12 E1_Ad KnownBoundary 0 0.00 16.84 26.46 20.58 3.23 441.90 42.44 3.61 7.93 16.82 0.00 0.00 0.00 0.00 0.00 0.00 4.77 46.68 3.95 5.56 134.12 57.56 87.92 13 ER1c ExonRegion 0 3.17 32.03 15.93 16.35 13.38 689.05 63.88 5.19 3.71 16.06 0.00 0.00 0.00 0.00 0.00 4.46 9.90 31.41 19.11 22.87 351.49 160.43 297.34 14 ER1d ExonRegion 0 5.21 13.62 25.08 19.92 9.31 421.90 34.36 7.35 18.79 15.73 0.00 0.00 0.00 0.00 0.00 5.02 6.13 28.01 8.75 12.32 323.45 139.14 206.06 15 E1a_E2a KnownJunction 0 3.70 5.06 32.35 20.38 0.00 98.41 7.38 12.16 25.32 19.21 0.00 0.00 0.00 0.00 0.00 4.27 8.88 28.64 4.24 17.07 515.10 289.33 204.36 16 E1a_E4a KnownJunction 0 0.00 0.00 0.00 1.76 0.00 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 11.18 0.00 12.55 17 ER2a ExonRegion 0 6.35 9.08 79.66 47.49 7.43 109.35 8.20 32.10 74.02 46.73 0.00 4.74 0.00 1.39 0.00 4.14 18.10 83.87 32.11 29.15 579.19 379.54 356.51 18 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 19 E2a_E4a KnownJunction 0 9.04 18.48 113.66 55.70 33.45 268.94 29.32 44.28 83.65 47.65 0.00 11.70 0.00 0.00 0.00 7.95 35.06 67.90 20.33 30.04 859.20 216.09 180.71 20 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.70 0.00 0.71 0.00 0.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.08 0.00 0.03 21 E3_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3b ExonRegion 0 0.00 0.00 0.37 0.31 0.00 1.56 0.00 0.80 0.79 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 0.83 0.00 0.00 4.14 0.25 6.36 23 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 24 ER4a ExonRegion 0 12.52 34.05 120.29 72.34 37.02 536.00 43.61 49.12 99.68 55.06 0.00 5.12 0.00 3.35 0.37 6.87 28.86 83.18 31.05 38.28 762.06 418.35 347.48 25 E4_Da KnownBoundary 0 0.00 0.00 4.08 0.00 0.00 8.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.18 26 E4a_E5b KnownJunction 0 14.15 29.53 191.57 80.61 39.22 372.46 58.65 57.75 90.74 65.27 0.00 6.30 0.00 0.00 0.00 3.50 32.54 88.46 17.51 41.35 803.97 439.66 408.38 27 ER4b ExonRegion 0 0.55 0.00 1.15 1.58 0.00 3.70 0.00 0.67 0.96 0.89 0.00 0.00 0.00 0.00 0.00 0.00 0.90 0.00 0.00 0.00 0.58 1.09 4.34 28 ER5a ExonRegion 0 1.12 0.78 5.34 2.40 1.65 7.80 1.11 2.77 3.69 2.05 0.00 0.04 0.00 0.01 0.00 0.05 0.24 0.79 0.29 0.48 10.38 5.91 4.46 29 E5_Ab KnownBoundary 0 0.00 3.35 5.26 2.80 0.00 15.90 0.00 1.60 3.12 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.92 0.00 4.35 30 ER5b ExonRegion 0 20.44 39.72 173.61 91.24 51.71 465.87 47.10 64.29 89.85 50.44 0.00 3.62 0.00 2.67 0.59 9.30 27.44 90.67 24.22 42.94 600.40 372.09 394.84 31 E5a_E7a KnownJunction 0 16.67 75.97 170.51 115.17 78.10 551.84 67.35 61.36 77.26 42.23 0.00 0.00 0.00 2.30 0.00 3.25 31.32 79.26 24.66 50.94 454.43 476.83 299.62 32 ER6a ExonRegion 0 0.28 0.01 0.25 0.01 0.00 0.50 0.00 0.01 0.75 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.58 0.41 33 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER7a ExonRegion 0 26.10 63.72 164.06 110.55 64.22 484.84 55.02 64.91 83.03 46.51 0.00 9.86 0.00 2.89 0.00 2.97 23.84 71.55 17.70 44.80 434.01 431.06 317.16 35 ER7b ExonRegion 0 21.01 50.86 146.39 86.63 114.18 470.26 74.06 64.99 88.82 53.61 0.00 6.71 0.00 4.44 0.00 2.10 18.64 56.65 22.96 29.11 420.88 330.26 339.04 36 E7b_E8a KnownJunction 0 25.56 62.62 168.98 92.36 165.37 713.85 113.90 68.96 108.51 66.03 0.00 0.00 0.00 4.94 0.00 4.27 13.00 56.71 38.59 23.14 377.03 325.70 377.48 37 ER8a ExonRegion 0 26.39 46.42 133.41 103.44 61.89 461.26 64.73 80.48 97.88 69.95 0.00 1.55 0.00 6.30 0.00 1.75 19.07 34.10 20.28 23.50 288.57 318.83 264.20 38 E8a_E9a KnownJunction 0 49.93 55.45 167.53 116.44 63.07 407.44 57.46 110.45 122.16 82.55 0.00 0.00 0.00 7.24 0.00 8.72 13.18 42.99 21.18 21.16 240.56 448.41 326.26 39 ER9a ExonRegion 0 44.95 46.98 150.85 109.12 63.31 503.05 55.31 98.81 105.59 69.96 0.00 0.00 0.00 3.33 0.00 5.19 37.99 32.82 16.52 18.28 304.41 354.06 281.52 40 E9_Da KnownBoundary 0 20.97 11.38 56.86 55.17 31.15 266.66 33.03 36.84 46.67 22.27 0.00 0.00 0.00 0.00 0.00 0.00 7.29 8.33 0.00 6.33 84.20 118.85 61.46 41 E9_Db KnownBoundary 0 13.78 25.00 56.86 50.41 38.54 165.19 20.84 36.68 46.70 31.19 0.00 0.00 0.00 2.47 0.00 0.00 8.70 6.22 3.58 3.26 61.10 125.71 110.80 42 ER9b ExonRegion 0 25.40 48.81 140.30 110.39 66.89 530.88 59.58 89.02 97.57 66.52 0.00 0.00 0.00 3.25 0.00 0.00 29.71 17.55 9.56 8.51 177.40 306.28 217.31 43 ER9c ExonRegion 0 21.94 51.77 132.04 96.86 97.69 538.59 71.19 100.07 101.21 73.30 0.00 5.77 8.72 8.32 0.00 0.00 13.38 16.82 21.68 14.11 127.39 407.02 219.06 44 E9_Dc KnownBoundary 0 32.08 32.95 110.67 79.11 115.28 629.18 94.38 105.72 97.31 70.54 0.00 5.85 12.66 9.65 0.00 0.00 4.77 13.10 4.80 20.13 126.83 477.32 161.76 45 ER9d ExonRegion 0 13.31 34.41 169.75 110.58 83.61 409.10 63.02 102.85 114.66 76.25 0.00 4.35 2.96 2.49 0.00 1.31 12.12 10.77 7.75 23.34 72.00 422.86 145.83 46 E9_Dd KnownBoundary 0 36.82 44.79 237.93 111.27 60.78 700.05 88.46 108.76 137.79 89.58 0.00 6.00 0.00 0.00 0.00 0.00 9.44 10.49 4.80 33.11 66.10 327.84 115.07 47 ER9e ExonRegion 0 12.96 13.04 100.50 64.13 32.93 191.51 24.73 51.46 71.15 41.20 0.00 5.53 0.67 0.50 0.00 1.04 2.84 2.91 6.40 9.37 29.33 265.49 51.15