Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	AC131097.2	Gene	0	9.95	15.76	4.17	5.15	6.85	14.56	8.41	14.21	9.51	11.93	2.92	1.41	2.52	5.95	4.28	5.19	4.61	20.63	33.14	18.67	6.00	2.91	4.72
2	430555	Transcript	0	8.78	29.74	3.87	5.31	4.59	17.69	14.14	16.79	7.60	17.91	2.96	1.57	1.63	3.50	1.85	4.23	4.05	19.71	39.28	25.07	5.93	1.92	3.96
3	415434	Transcript	0	0.00	0.20	0.00	0.20	0.26	0.00	0.00	0.25	0.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.21	0.00	0.00	0.00
4	457686	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.16	0.00	0.00	0.00	0.00	0.00
5	429947	Transcript	0	2.88	0.00	2.92	1.53	0.64	2.25	3.77	2.21	1.06	2.71	1.74	0.25	0.27	3.57	1.77	2.29	1.54	5.81	9.55	7.59	2.85	0.79	0.43
6	439601	Transcript	0	1.20	0.87	0.02	1.36	1.46	2.67	2.28	2.86	0.45	0.99	0.04	1.16	1.26	0.60	0.70	1.38	0.72	0.53	2.40	3.54	0.53	0.46	1.27
7	416204	Transcript	0	0.00	0.30	0.00	0.00	0.00	0.00	0.00	0.09	0.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.77	0.00	0.00	0.00
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	3.31	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1b	ExonRegion	0	2.12	2.03	0.00	0.00	0.00	0.00	5.30	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER1c	ExonRegion	0	43.93	19.35	10.26	7.73	47.99	90.03	46.26	14.97	13.23	20.11	11.89	0.00	0.48	26.23	3.74	19.80	10.33	32.47	74.51	22.79	8.40	5.96	27.99
11	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.16	0.00	0.00	0.00	0.00	0.00
12	E1b_E3a	KnownJunction	0	6.82	12.17	8.93	5.53	3.14	2.56	0.00	8.05	7.06	9.05	0.00	0.00	7.47	0.00	0.00	0.00	9.16	11.57	8.66	6.33	0.00	0.00	0.00
13	ER1d	ExonRegion	0	4.23	8.64	10.11	4.43	8.03	0.00	4.30	5.19	6.18	8.03	1.93	0.00	4.69	0.81	0.00	0.00	9.90	12.93	8.76	6.38	0.00	0.00	0.00
14	ER2a	ExonRegion	0	10.08	0.00	7.00	2.33	0.75	5.24	1.37	2.17	1.54	2.58	2.06	1.00	1.08	6.86	7.08	5.24	1.38	9.42	20.20	6.28	4.54	1.75	1.71
15	E2a_E3a	KnownJunction	0	0.00	0.00	4.67	1.27	0.00	0.00	1.94	0.00	0.00	1.64	2.16	0.00	0.00	7.42	0.00	3.93	4.77	5.64	12.05	18.66	3.15	0.00	0.00
16	ER3a	ExonRegion	0	9.44	6.40	12.88	10.85	4.96	2.29	4.77	21.49	16.76	11.85	12.77	0.34	3.58	16.73	15.46	11.69	16.55	25.99	50.38	31.58	15.25	5.67	13.83
17	E3_Da	NovelBoundary	0	23.56	6.64	15.82	5.26	0.00	0.00	2.03	7.31	5.93	7.06	2.68	0.00	0.00	2.24	0.00	4.36	0.00	3.48	0.00	6.01	0.00	0.00	0.00
18	E3a_E4b	KnownJunction	0	7.26	0.00	5.20	8.39	4.07	2.21	0.00	29.70	12.21	18.02	5.37	0.00	6.82	12.01	5.69	0.00	3.55	23.34	21.46	19.56	20.02	2.57	0.00
19	E3a_E6a	KnownJunction	0	3.78	0.00	0.00	11.39	0.00	0.00	0.00	15.40	17.59	7.49	5.16	0.00	0.00	2.24	0.00	7.78	9.54	27.98	43.20	27.61	0.00	2.57	0.00
20	I3	Intron	0	15.50	3.25	8.25	5.73	5.61	2.01	4.96	4.14	3.09	5.29	1.88	1.17	0.68	3.48	2.90	3.43	4.58	8.71	5.26	6.60	1.46	1.85	4.64
21	I3_SR2	SilentIntronRegion	0	34.37	2.32	7.35	2.73	12.03	1.48	4.89	3.28	2.22	3.21	6.10	1.97	0.78	10.82	7.80	5.98	6.44	5.85	2.36	4.85	2.07	3.91	5.91
22	I3_AR2	ActiveIntronRegion	0	16.95	1.82	8.20	3.34	2.49	1.14	4.82	3.10	1.31	4.42	0.98	0.40	1.30	4.98	4.32	6.83	7.26	10.84	6.07	6.85	1.13	4.03	5.04
23	I3_SR3	SilentIntronRegion	0	18.21	4.02	9.31	3.83	6.18	2.17	5.36	4.58	3.77	5.74	1.78	2.03	0.85	3.39	2.26	2.98	5.27	9.96	4.64	6.55	0.94	1.94	6.32
24	I3_AR2	ActiveIntronRegion	0	2.12	0.83	0.89	1.36	0.00	0.17	0.78	1.96	2.64	2.97	0.00	0.00	0.00	1.62	0.00	2.97	0.00	7.14	6.66	4.06	0.00	0.00	11.75
25	ER4a	ExonRegion	0	1.20	0.87	0.02	1.36	1.46	2.67	2.28	2.86	0.45	0.99	0.04	1.16	1.26	0.60	0.70	1.38	0.72	0.53	2.40	3.54	0.53	0.46	1.27
26	E4_Ab	KnownBoundary	0	197.66	269.10	112.24	164.58	223.85	259.96	303.66	225.04	202.63	171.22	83.13	106.08	83.60	102.07	158.60	385.63	125.20	154.91	200.95	250.94	78.33	207.40	191.64
27	ER4b	ExonRegion	0	12.65	5.77	2.59	8.63	6.06	9.36	10.50	28.04	14.65	18.08	3.62	9.87	22.83	11.89	23.44	15.43	10.05	42.44	71.46	24.44	11.42	4.80	8.98
28	E4_Da	NovelBoundary	0	866.97	517.80	391.77	472.27	593.72	496.87	743.57	530.68	479.42	445.80	217.90	63.92	137.65	69.93	174.05	428.69	431.98	475.93	440.95	587.91	340.70	237.89	510.90
29	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	1.30	0.00	0.00	4.50	4.27	2.34	2.71	2.37	0.00	0.00	0.00	0.00	0.00	0.00	3.86	4.52	3.26	2.47	0.00	0.00
30	E4a_E6a	KnownJunction	0	18.97	3.35	5.38	11.52	7.56	10.39	6.23	25.92	15.05	23.75	2.16	0.00	0.00	4.94	0.00	0.00	0.00	24.46	39.91	14.38	16.31	0.00	0.00
31	ER5a	ExonRegion	0	1.44	0.00	0.00	1.24	1.82	3.74	7.24	2.42	0.36	3.91	0.36	0.00	0.00	0.00	0.00	0.00	0.00	4.34	1.44	2.16	1.23	1.42	0.00
32	E6_Aa	NovelBoundary	0	3.33	0.00	3.08	1.76	0.00	0.00	4.42	0.00	0.00	4.03	0.00	0.00	0.00	0.00	0.00	12.65	0.00	2.32	0.00	2.36	0.00	2.94	0.00
33	ER6a	ExonRegion	0	16.76	39.70	9.06	17.51	15.92	40.75	26.22	50.27	37.69	33.39	4.94	1.82	0.66	13.09	6.69	12.45	7.07	65.95	109.86	58.77	16.26	11.92	13.32
34	E6_Da	KnownBoundary	0	10.59	56.04	21.55	10.89	25.04	31.57	14.79	61.90	52.49	41.88	7.69	0.00	6.82	11.54	8.90	7.60	12.72	74.86	44.24	55.61	17.61	9.37	0.00
35	E6a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER6b	ExonRegion	0	44.45	57.44	14.50	16.75	24.67	66.49	31.09	46.41	45.17	38.04	10.75	1.19	5.97	17.29	11.25	11.52	14.15	74.29	82.43	61.64	20.65	9.48	6.72
37	E6_Db	KnownBoundary	0	16.97	67.69	7.89	26.44	15.03	52.19	22.79	39.68	42.16	31.43	2.00	6.30	6.82	18.60	4.45	4.27	7.20	66.37	84.61	69.03	18.97	8.70	4.01
38	ER6c	ExonRegion	0	24.88	72.03	11.34	14.28	15.05	24.97	9.99	44.76	28.70	42.20	6.80	2.89	3.34	11.10	5.38	8.07	14.98	67.06	89.40	61.54	17.75	7.48	7.03
39	E6_Dc	KnownBoundary	0	33.34	81.37	11.03	12.89	20.37	44.41	22.35	41.40	21.09	68.90	2.68	0.00	13.64	9.83	0.00	15.30	16.36	57.62	90.07	52.41	21.75	7.16	0.00
40	ER6d	ExonRegion	0	17.56	59.48	7.74	10.62	9.17	35.38	24.98	33.58	15.21	35.81	3.99	3.13	3.27	7.00	3.70	8.47	8.10	39.43	78.55	50.13	11.86	3.83	7.92
41	E6_Dd	NovelBoundary	0	34.52	109.32	14.58	15.98	18.76	34.13	16.52	68.80	37.85	68.90	0.00	0.00	6.82	4.71	4.45	12.39	9.16	51.86	74.64	72.48	20.57	14.76	7.85
42	I6	Intron	0	18.90	34.07	6.01	10.65	18.19	23.91	15.94	35.42	21.92	26.84	4.38	1.33	2.39	10.84	4.97	7.28	6.52	42.07	55.30	37.11	8.99	4.39	6.35
43	I6_SR1	SilentIntronRegion	0	14.22	29.04	6.11	5.75	10.47	20.23	14.25	26.48	20.01	25.65	5.83	0.49	4.53	10.34	5.26	6.40	5.59	45.11	55.49	32.93	13.74	2.07	6.56
44	I6_AR1	ActiveIntronRegion	0	19.97	34.18	4.78	11.87	19.72	23.90	14.61	37.19	21.92	25.79	3.87	2.08	1.34	11.39	4.71	7.00	5.35	35.91	43.47	35.62	7.15	5.00	5.17
45	I6_SR2	SilentIntronRegion	0	24.63	44.56	10.98	16.15	28.54	32.00	25.17	47.45	26.06	33.81	3.37	0.00	2.14	9.63	5.39	10.37	13.44	61.25	104.35	52.40	6.41	6.87	10.81
46	E7_Aa	NovelBoundary	0	117.80	133.99	10.67	21.31	39.05	80.58	57.50	86.38	40.05	53.62	5.32	0.00	12.66	4.65	0.00	7.35	15.71	57.21	55.06	71.08	7.23	7.84	12.12
47	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER8a	ExonRegion	0	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	1.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.14	0.00	0.00	0.00
50	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER9a	ExonRegion	0	0.00	0.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.72	0.00	0.00	0.00
52	E9_Da	NovelBoundary	0	75.12	127.08	8.84	10.22	18.85	55.54	19.30	20.70	19.07	16.20	2.68	0.00	0.00	11.30	0.00	12.05	0.00	11.44	14.12	32.92	5.25	5.82	12.72
53	Ix	Intron	0	32.48	68.84	1.65	5.50	19.32	19.04	7.77	4.65	11.63	8.49	0.87	3.22	0.00	3.06	0.92	2.68	0.00	10.79	28.81	24.97	1.99	3.76	5.30
54	Ix_SR1	SilentIntronRegion	0	33.04	70.06	1.68	5.60	19.67	19.36	7.91	4.73	11.84	8.64	0.89	3.28	0.00	3.12	0.94	2.73	0.00	10.99	29.33	25.40	2.03	3.83	5.40
55	Ix	Intron	0	8.08	18.13	2.34	3.03	4.73	12.09	7.07	8.67	14.37	16.59	0.94	2.09	1.07	3.30	0.94	2.27	4.01	39.88	44.98	49.09	4.97	1.23	2.85
56	Ix_SR1	SilentIntronRegion	0	8.08	18.14	2.35	3.03	4.74	12.09	7.08	8.67	14.38	16.60	0.94	2.09	1.07	3.31	0.94	2.27	4.01	39.91	45.01	49.12	4.97	1.23	2.85
57	Ix	Intron	0	11.02	37.87	5.47	7.38	8.82	12.98	8.88	20.64	20.54	28.23	2.03	0.40	1.36	4.69	1.34	3.45	7.66	58.56	54.52	62.67	6.68	2.18	5.94
58	Ix_SR1	SilentIntronRegion	0	11.03	37.92	5.48	7.39	8.84	13.00	8.90	20.68	20.57	28.27	2.03	0.40	1.37	4.69	1.34	3.46	7.67	58.64	54.59	62.76	6.69	2.19	5.95
59	I9	Intron	0	9.20	29.17	5.05	11.69	10.04	21.04	6.06	14.91	20.76	26.06	0.28	1.10	0.59	0.88	0.62	1.44	1.39	37.47	31.06	47.34	3.34	1.40	3.07
60	I9_SR1	SilentIntronRegion	0	14.12	43.83	5.32	7.85	11.69	23.07	11.33	25.17	15.21	24.58	0.87	1.16	1.40	1.92	1.86	1.81	2.19	46.59	47.32	50.94	4.49	1.60	3.34
61	I9_SR2	SilentIntronRegion	0	7.68	21.54	4.40	8.65	8.40	16.86	5.11	13.07	17.59	25.40	0.21	1.31	0.36	0.95	0.51	1.59	1.31	39.21	31.83	51.56	3.47	1.25	3.65
62	I9_AR4	ActiveIntronRegion	0	11.85	33.89	9.57	37.98	18.41	35.65	6.78	24.28	24.92	56.42	0.00	1.36	1.50	0.52	0.48	0.92	2.75	60.69	40.39	61.51	4.77	3.56	3.31
63	I9_SR5	SilentIntronRegion	0	3.98	1.30	1.67	0.49	2.03	1.91	0.00	2.97	2.17	2.66	0.00	0.00	0.00	0.00	0.00	0.00	1.72	16.63	10.70	19.57	0.26	0.00	2.94
64	I9_AR5	ActiveIntronRegion	0	17.89	62.52	12.77	29.59	17.94	37.14	8.10	12.01	26.28	40.35	0.00	0.00	0.00	0.17	0.00	1.73	0.96	60.91	29.71	51.77	2.89	0.91	2.14
65	I9_SR6	SilentIntronRegion	0	9.32	66.87	4.37	18.70	13.08	20.98	4.62	9.57	14.92	16.00	0.00	0.00	0.84	0.31	1.16	2.58	0.10	18.01	22.12	36.64	2.53	0.45	0.00
66	I9_AR6	ActiveIntronRegion	0	22.36	59.33	16.88	44.53	20.34	48.64	4.52	32.76	38.89	59.96	0.63	0.95	0.42	0.58	0.63	1.05	1.76	48.00	40.15	61.71	2.59	1.90	4.18
67	I9_SR7	SilentIntronRegion	0	4.90	22.89	2.07	6.34	7.55	19.36	4.43	6.75	29.18	13.31	0.08	0.71	0.41	0.20	0.00	0.80	0.70	15.71	12.89	26.97	1.96	1.13	1.43
68	I9_AR1	ActiveIntronRegion	0	24.97	4.23	9.26	7.75	19.03	5.41	10.83	5.17	5.74	13.29	2.35	14.49	17.23	7.39	2.39	4.03	1.72	3.90	1.11	10.33	0.00	0.36	1.02
69	ER10a	ExonRegion	0	0.00	0.39	0.00	0.39	0.52	0.00	0.00	0.50	0.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.41	0.00	0.00	0.00