Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC005237.2 Gene 0 4.63 1.48 1.00 9.08 1.22 1.00 0.85 4.46 2.52 2.81 0.00 0.00 0.43 0.00 0.00 0.00 0.30 0.25 1.16 0.39 11.06 7.41 31.35 2 458377 Transcript 0 1.39 0.40 0.27 2.57 0.33 0.54 0.32 1.39 0.98 0.75 0.00 0.00 0.11 0.00 0.00 0.00 0.08 0.07 0.33 0.10 4.46 2.60 10.56 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.24 0.00 0.00 4 E1_Da NovelBoundary 0 7.56 0.00 10.02 2.00 4.16 39.01 0.00 17.29 16.52 11.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.31 0.00 0.00 433.55 456.01 375.17 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 6.16 1.53 8.07 5.69 4.04 16.02 1.86 5.00 7.74 7.56 0.00 0.77 0.00 0.00 0.44 0.00 0.00 1.48 0.00 0.46 102.39 113.45 156.73 7 Ix_SR1 SilentIntronRegion 0 6.19 1.54 8.11 5.72 4.06 16.08 1.86 5.02 7.77 7.59 0.00 0.77 0.00 0.00 0.44 0.00 0.00 1.49 0.00 0.46 102.83 113.93 157.40 8 Ix Intron 0 29.09 4.58 16.51 16.43 16.96 82.04 13.82 15.19 23.87 15.02 0.04 0.06 0.40 1.27 0.08 0.41 0.53 5.54 3.87 1.02 131.13 240.63 311.65 9 Ix_SR3 SilentIntronRegion 0 14.20 6.23 5.25 9.94 5.77 42.43 6.11 13.31 17.18 7.11 0.00 0.00 1.79 0.00 0.69 0.86 0.00 3.12 0.69 1.97 137.43 214.64 273.37 10 Ix_AR3 ActiveIntronRegion 0 26.69 8.58 8.95 14.93 5.58 51.35 5.87 14.50 18.42 11.97 0.00 0.00 0.00 0.00 1.26 2.46 0.00 6.59 3.32 0.46 182.62 331.46 376.53 11 Ix_AR2 ActiveIntronRegion 0 20.75 6.15 10.26 20.24 11.25 36.08 5.65 16.63 21.48 13.51 0.00 0.41 1.03 0.72 0.27 0.40 0.88 2.78 4.21 0.86 135.07 329.26 306.24 12 Ix_SR2 SilentIntronRegion 0 34.61 4.54 16.05 13.73 20.72 92.25 16.91 12.95 19.02 9.33 0.09 0.00 0.41 1.32 0.00 0.14 0.32 2.95 2.18 0.61 70.67 189.04 214.73 13 Ix_AR1 ActiveIntronRegion 0 34.81 4.50 24.49 20.73 19.57 121.60 18.81 18.21 34.97 24.34 0.00 0.00 0.00 1.26 0.00 0.28 0.61 9.47 4.29 1.36 203.95 314.18 495.30 14 Ix_SR1 SilentIntronRegion 0 19.88 2.82 16.35 15.98 13.09 59.76 9.68 16.12 25.74 20.48 0.00 0.00 0.00 2.04 0.00 1.04 0.77 9.80 7.96 1.49 177.63 197.73 326.03 15 Ix Intron 0 7.25 1.89 6.25 3.77 3.57 37.98 5.38 10.16 17.41 9.91 0.00 0.00 0.22 0.86 0.00 0.17 0.19 4.53 2.03 1.73 92.43 135.51 218.77 16 Ix_SR1 SilentIntronRegion 0 7.26 1.89 6.27 3.78 3.58 38.07 5.39 10.18 17.45 9.94 0.00 0.00 0.22 0.87 0.00 0.17 0.19 4.54 2.04 1.73 92.63 135.81 219.27 17 Ix Intron 0 6.35 0.61 6.03 4.27 6.02 20.63 4.96 3.09 1.10 3.08 0.29 0.00 0.00 0.00 0.00 0.00 0.00 2.48 0.96 0.96 26.09 16.25 49.34 18 Ix_AR1 ActiveIntronRegion 0 6.39 0.61 6.06 4.29 6.06 20.75 4.99 3.11 1.11 3.09 0.29 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.96 0.96 26.25 16.35 49.63 19 E2_Aa NovelBoundary 0 3.78 0.00 0.00 1.86 0.00 2.16 0.00 8.87 4.17 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.70 7.78 27.32 20 ER2a ExonRegion 0 1.05 0.00 0.00 1.01 0.00 1.82 0.66 1.29 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.12 0.00 9.73 4.13 14.54 21 E2_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.08 5.79 2.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.84 13.65 0.00 16.25 3.12 24.93 22 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 Ix Intron 0 2.41 0.56 2.58 4.63 0.84 20.41 0.94 5.57 4.20 2.28 0.00 0.00 0.00 0.05 0.00 0.00 0.13 1.37 1.00 0.67 19.84 19.25 42.61 24 Ix_SR2 SilentIntronRegion 0 2.85 0.52 1.99 3.39 0.86 20.85 0.85 4.14 3.66 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.21 1.18 0.82 0.14 19.67 18.33 42.63 25 Ix_AR1 ActiveIntronRegion 0 1.99 0.72 3.80 7.48 0.94 22.03 1.24 8.85 5.57 1.68 0.00 0.00 0.00 0.13 0.00 0.00 0.00 1.79 1.50 1.75 20.55 21.45 45.66 26 E3_Aa NovelBoundary 0 3.26 0.00 0.00 8.22 0.00 0.00 0.00 8.91 3.53 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.78 28.26 27 ER3a ExonRegion 0 5.93 1.98 1.33 11.87 1.63 0.89 0.97 5.64 2.91 3.74 0.00 0.00 0.57 0.00 0.00 0.00 0.40 0.34 1.52 0.52 12.34 8.88 38.25