Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RPS7 Gene 0 549.75 1198.42 1837.96 841.42 736.34 1049.34 815.94 307.25 114.08 474.34 825.27 175.75 87.46 384.16 506.77 534.38 534.41 300.27 716.46 246.68 432.89 338.27 252.57 2 304921 Transcript 1 142.22 217.99 55.44 33.23 83.65 122.85 74.49 9.76 6.55 26.70 268.03 3.60 1.07 249.99 298.19 241.15 152.76 37.68 98.91 35.00 128.67 31.64 32.75 3 407445 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 462576 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 403564 Transcript 0 3.56 0.00 9.31 0.00 8.40 0.00 4.06 0.00 1.62 4.67 4.90 6.15 0.00 2.06 6.18 4.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 491937 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 406376 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 0.00 0.00 0.00 0.00 8 481006 Transcript 0 29.04 22.72 64.11 32.44 35.46 35.37 34.55 22.71 13.54 25.59 55.70 25.34 18.74 34.22 34.85 25.88 30.89 14.29 20.44 17.66 17.27 16.38 11.70 9 479123 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 472966 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ER1a ExonRegion 1 142.22 217.99 55.44 33.23 83.65 122.85 74.49 9.76 6.55 26.70 268.03 3.60 1.07 249.99 298.19 241.15 152.76 37.68 98.91 35.00 128.67 31.64 32.75 12 E1_Ac NovelBoundary 1 562.99 970.95 239.85 149.07 394.06 561.49 390.49 54.59 30.82 120.48 1129.92 45.46 86.36 1448.00 1132.58 896.26 650.40 161.42 373.56 154.94 490.57 98.03 176.96 13 E1a_E1f KnownJunction 1 17379.90 35298.52 8958.73 3506.45 24670.39 37365.98 28420.51 1504.83 535.38 2448.25 8885.25 144.20 111.03 7019.93 12561.75 9395.40 6598.96 2961.84 10449.52 3726.76 5809.23 4117.46 4736.46 14 E1a_E1g NovelJunction 0 114.76 218.51 61.88 41.22 162.39 211.19 165.52 5.71 2.40 24.34 73.18 5.40 0.00 38.14 48.09 11.62 34.50 20.35 73.88 20.77 12.97 17.15 24.93 15 ER1b ExonRegion 1 525.60 919.18 223.43 127.20 420.09 561.75 459.86 50.70 32.52 115.84 1079.20 17.32 9.38 1385.92 1290.09 986.75 682.19 211.88 418.34 146.10 545.79 179.88 165.43 16 ER1c ExonRegion 1 3571.83 7905.64 2465.08 1043.70 5228.14 7752.75 5620.15 449.40 168.35 770.89 2892.10 45.89 45.26 2813.30 3455.68 2968.11 2148.88 1070.49 2681.76 913.19 1703.91 1158.65 1268.92 17 E1_Ae KnownBoundary 0 44.90 38.94 14.96 21.54 27.33 84.21 38.51 8.21 7.00 7.58 21.11 0.00 0.00 8.12 0.00 15.55 42.92 36.27 51.11 16.17 21.68 22.96 19.55 18 ER1d ExonRegion 1 19320.41 43514.53 12431.88 5690.59 31950.56 41776.50 30235.30 2270.50 842.10 3795.57 15743.85 62.34 58.16 7181.21 11674.64 14366.66 9950.88 5347.76 17708.07 4480.41 8211.46 6430.99 7046.18 19 ER1e ExonRegion 0 29.90 26.94 16.54 23.17 18.73 56.16 27.31 5.19 4.94 7.60 14.74 0.00 2.35 13.81 1.81 14.49 40.02 37.88 32.65 7.71 18.46 15.63 15.05 20 ER1f ExonRegion 0 58.27 23.02 33.97 21.78 19.59 43.56 39.03 4.40 9.66 12.71 109.45 4.28 1.98 61.30 59.54 73.61 63.05 61.30 42.33 15.79 21.03 26.88 16.18 21 E1_Db KnownBoundary 0 3.70 2.96 8.19 0.00 0.00 2.16 0.00 2.30 6.60 9.99 9.79 0.00 0.00 4.94 0.00 4.36 0.00 6.84 4.52 0.00 5.68 0.00 0.00 22 E1b_E1f KnownJunction 0 3.56 0.00 9.31 0.00 8.40 0.00 4.06 0.00 1.62 4.67 4.90 6.15 0.00 2.06 6.18 4.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E1b_E1g KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 0.00 0.00 0.00 0.00 24 ER1g ExonRegion 0 143.95 345.65 116.52 54.77 234.18 304.95 217.22 21.95 12.96 40.18 127.91 0.69 3.13 66.19 91.25 113.62 92.95 56.32 153.69 41.59 75.17 57.99 56.96 25 E1_Af KnownBoundary 0 18.74 55.38 61.71 41.25 19.19 32.14 9.05 19.35 15.36 20.98 21.95 0.00 0.00 4.89 4.45 14.18 11.50 45.89 37.08 8.76 18.29 5.51 7.68 26 E1_Ag KnownBoundary 1 27192.15 56562.10 129.50 52.21 40607.49 52041.91 41224.47 21.28 12.64 47.76 16725.29 59.27 30.68 5729.97 6058.61 15972.05 10935.28 765.98 21216.89 5444.34 9180.05 7668.58 8183.59 27 ER1h ExonRegion 1 21694.53 50095.41 14679.54 6631.19 38102.04 48434.50 35922.01 2598.44 970.94 4402.84 17984.33 115.45 67.74 8443.26 12900.26 15907.81 11600.82 6025.92 19825.35 5296.44 9667.18 7039.52 8034.65 28 E1_Ah KnownBoundary 1 8336.44 17207.07 23473.63 10559.26 15763.08 16439.11 14089.89 4123.34 1519.66 6777.11 6493.54 236.18 197.71 1123.09 1835.96 4116.36 4557.17 7522.63 6214.20 1816.21 3566.90 2592.26 2335.19 29 ER1i ExonRegion 1 23470.85 53520.82 16354.76 7268.18 41842.33 52063.78 38656.07 2903.69 1084.97 4916.17 19879.38 180.89 99.52 6740.10 9267.42 16670.66 12687.61 6537.97 21742.00 5608.16 10493.79 8025.72 8531.77 30 ER1j ExonRegion 1 3913.52 6225.22 10296.60 4405.41 4457.69 4704.95 3724.43 1855.31 695.08 3127.38 2758.02 79.71 59.32 309.70 467.39 1468.70 1783.58 3289.43 2197.03 558.57 1466.72 907.27 745.91 31 E1c_E2a KnownJunction 1 2206.54 1551.50 1989.11 576.38 113.33 144.58 138.98 386.10 159.03 657.53 1132.71 170.76 223.20 152.63 171.83 109.37 750.44 282.09 107.30 73.89 678.07 29.27 39.35 32 ER2a ExonRegion 1 1453.93 2638.91 7455.91 2283.17 93.02 202.76 241.07 1156.79 545.97 2643.84 8770.39 169.99 71.07 1298.30 1319.99 799.75 5962.15 618.12 1268.70 1234.57 5485.61 547.10 249.49 33 E2_Da KnownBoundary 0 0.00 0.00 2.54 1.37 4.33 0.00 3.71 0.00 0.00 4.38 7.63 0.00 0.00 0.00 10.38 4.10 11.97 1.62 0.00 0.00 11.06 0.00 3.59 34 E2a_E2b KnownJunction 1 829.85 4345.21 25842.88 10242.75 230.22 410.22 557.42 3949.11 1564.34 7322.19 20055.82 728.19 201.29 4978.60 5656.98 2942.82 13891.52 2300.62 6495.90 4544.00 9566.53 2509.35 1169.05 35 ER2b ExonRegion 0 3.56 10.78 47.98 17.75 3.37 4.50 6.68 9.12 3.48 17.57 41.56 3.32 1.28 17.33 15.61 12.00 31.81 7.28 25.33 10.24 19.33 8.35 7.63 36 E2_Ab KnownBoundary 0 0.00 14.60 6.62 11.89 10.78 4.66 4.06 9.16 2.95 12.20 8.74 0.00 6.82 12.36 5.44 0.00 13.74 4.27 3.95 6.39 0.00 3.12 7.51 37 ER2c ExonRegion 1 613.88 3929.60 21706.72 9460.82 6027.63 8929.11 5762.55 3284.56 1141.66 5114.38 5623.53 1764.97 851.29 4618.46 7081.13 8155.56 3974.99 4144.41 10338.80 2901.24 2707.71 4758.45 3949.11 38 E2_Db KnownBoundary 0 10.30 3.16 39.62 27.50 35.82 22.26 39.88 11.30 11.31 18.62 37.85 18.76 0.00 28.96 19.90 24.44 13.84 4.35 8.28 15.15 5.99 11.88 21.43 39 E2b_E2c KnownJunction 0 452.45 11011.79 32669.66 13933.66 30300.10 53728.32 45859.35 4367.69 1555.19 7107.03 9014.49 3142.47 1274.27 3878.65 4822.31 3404.75 6119.77 2337.51 7063.26 3004.81 4266.34 3630.66 1553.44 40 ER2d ExonRegion 0 9.50 17.75 22.39 23.19 19.04 5.69 18.11 11.40 8.89 10.70 25.29 14.72 7.08 24.87 10.24 12.88 17.03 8.26 16.31 8.32 6.40 7.75 14.66 41 E2_Dc KnownBoundary 0 2.89 15.06 13.93 23.64 12.05 0.00 17.97 9.82 13.11 3.57 9.69 42.16 0.00 33.08 11.00 24.35 14.03 8.75 23.44 2.43 2.41 8.33 12.63 42 ER2e ExonRegion 0 17.97 31.28 63.43 31.05 45.07 61.31 64.93 16.50 13.08 19.10 29.35 20.93 15.49 23.68 20.98 22.91 24.13 14.70 21.76 15.44 10.36 14.05 13.26 43 E2_Ac KnownBoundary 0 49.19 41.90 78.41 31.96 27.50 13.97 56.57 24.03 13.05 22.56 29.48 27.01 28.41 32.55 34.98 23.58 4.77 4.02 26.64 26.40 2.84 14.39 8.71 44 ER2f ExonRegion 1 2151.70 20820.01 25796.64 11951.29 8427.77 22649.28 19914.44 3990.49 1325.63 6072.09 7616.01 1511.66 453.69 3113.74 3736.50 2028.62 5550.56 1676.72 4192.49 2319.61 4520.94 2764.54 918.02 45 E2_Dd KnownBoundary 0 38.23 45.78 29.06 30.70 30.98 6.87 49.46 16.59 16.72 21.01 34.90 6.30 32.63 20.13 6.30 35.80 21.22 4.77 0.00 14.38 17.54 8.08 11.01 46 E2d_E2e KnownJunction 1 8721.69 20864.44 26814.58 11971.57 861.55 589.09 463.53 4542.58 1408.20 6229.34 9049.77 2006.75 866.01 2229.10 4537.99 2382.11 5798.03 1712.02 3258.82 2262.86 5841.91 2198.65 957.86 47 ER2g ExonRegion 0 36.78 20.19 38.72 25.05 40.56 21.50 34.78 21.49 13.94 19.66 50.16 34.93 21.99 34.46 17.78 22.59 26.23 9.51 9.90 13.35 7.81 16.63 14.05 48 E2_Ad KnownBoundary 1 91.13 31.84 54.52 37.46 99.58 35.43 69.87 41.16 20.08 32.93 50.22 84.33 34.58 24.07 24.60 11.88 17.77 6.22 8.28 5.18 2.53 38.58 15.62 49 ER2h ExonRegion 0 100.76 91.22 133.91 73.72 55.76 24.34 43.85 45.17 19.41 41.61 80.27 71.21 38.65 47.93 49.91 35.01 44.19 14.80 22.56 20.19 24.60 28.05 18.04 50 E2_Ae KnownBoundary 1 57.34 36.90 56.89 35.19 76.57 43.50 55.78 38.03 7.84 25.30 63.33 80.28 14.28 53.09 19.78 27.43 33.94 14.72 0.00 8.95 23.54 21.49 15.88 51 ER2i ExonRegion 0 7453.02 9990.69 18851.37 9134.80 1952.64 1332.87 1377.40 3207.87 1083.59 4633.23 7248.80 2722.20 1316.15 3126.99 4015.02 3130.48 4316.43 2033.53 5000.94 1976.06 4032.69 2872.16 1352.60 52 E2_De KnownBoundary 0 118.10 45.12 83.23 56.50 57.89 30.44 78.57 64.20 28.96 36.56 131.14 31.96 72.24 66.63 79.86 71.61 55.82 23.26 32.66 38.99 25.14 19.84 19.72 53 E2e_E2f KnownJunction 1 2313.37 1531.57 9388.79 3315.06 111.80 78.82 56.40 1680.42 638.74 2638.38 3467.77 550.08 606.13 230.80 441.93 155.94 1802.24 591.83 321.70 770.97 1510.77 129.94 70.00 54 ER2j ExonRegion 0 106.24 64.72 113.05 63.09 104.34 89.99 61.28 60.67 30.67 55.31 122.05 60.31 67.36 96.58 95.58 73.60 53.11 41.59 45.78 40.40 22.79 35.24 41.26 55 E2_Df KnownBoundary 0 142.69 39.73 135.00 61.83 127.76 88.07 78.61 61.36 32.61 58.80 120.93 55.22 52.11 166.87 93.33 114.93 43.20 32.25 63.06 49.15 9.88 61.17 30.65 56 ER2k ExonRegion 0 93.46 20.94 93.72 53.77 85.04 68.77 45.08 51.31 25.63 44.66 80.19 72.38 74.38 108.99 94.65 88.75 33.27 23.62 53.11 35.17 16.01 35.29 17.57 57 E2_Dg KnownBoundary 0 77.05 22.69 74.69 51.01 89.73 47.98 42.75 39.35 23.35 43.46 90.08 91.83 41.88 88.53 147.10 38.79 27.02 25.78 28.89 21.22 16.74 26.88 15.45 58 ER2l ExonRegion 0 57.86 28.62 106.29 55.91 52.84 54.15 31.83 43.72 23.64 46.01 101.73 42.17 36.20 61.39 85.01 45.99 41.37 25.68 24.78 31.61 31.58 26.50 11.88 59 E2_Af KnownBoundary 0 59.57 24.40 49.91 30.23 30.39 33.67 12.98 17.83 8.54 30.92 26.64 37.66 40.42 7.24 18.42 23.93 24.87 6.84 4.80 8.82 5.37 6.00 7.77 60 ER2m ExonRegion 0 859.68 404.58 5564.06 3000.59 33.75 20.86 21.25 821.47 326.74 1332.75 2051.65 481.70 212.08 975.69 1128.19 887.09 1082.42 641.80 1404.21 446.43 768.64 440.66 349.09 61 ER2n ExonRegion 1 693.72 232.19 1434.69 1752.99 60.28 33.01 35.98 216.87 93.00 308.58 1274.69 478.02 306.23 918.96 1226.89 1066.99 662.32 424.98 1493.19 224.28 290.37 236.54 455.01 62 ER2o ExonRegion 0 23.28 101.68 11.03 17.72 32.11 23.84 30.45 5.19 1.24 5.73 44.46 25.98 56.28 47.10 46.42 20.80 29.71 18.48 25.48 6.38 8.81 2.08 17.62