Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CPSF3 Gene 0 108.05 162.43 166.33 113.41 170.46 112.48 174.11 72.26 52.53 176.74 195.18 274.81 196.76 237.46 198.23 177.71 230.18 86.40 123.20 113.92 71.14 92.22 63.87 2 238112 Transcript 0 23.75 13.19 5.30 3.81 20.61 16.84 18.24 2.52 1.13 3.15 8.07 15.69 7.04 12.58 18.88 8.90 9.57 3.66 3.91 4.46 5.50 2.79 3.04 3 475482 Transcript 0 0.00 3.48 0.56 1.64 0.00 3.49 2.07 2.05 0.97 3.65 2.62 0.00 4.78 7.79 1.26 7.77 4.75 3.69 4.42 3.53 2.52 1.56 1.23 4 427001 Transcript 0 0.08 0.00 0.09 0.29 0.38 0.26 0.52 0.68 0.04 0.25 0.21 0.00 1.01 0.52 0.83 0.92 0.59 0.13 0.00 0.15 0.00 0.30 0.00 5 460593 Transcript 0 0.83 0.74 1.95 1.74 1.66 0.49 3.24 0.36 0.88 1.06 0.92 3.53 1.09 1.84 0.71 2.84 2.87 0.46 1.25 1.85 0.25 0.12 1.81 6 489629 Transcript 0 18.38 19.31 7.71 11.53 30.58 33.48 24.50 6.68 9.44 8.43 7.19 21.26 17.65 8.96 19.49 5.98 10.83 6.27 6.76 7.22 10.18 25.26 13.66 7 489403 Transcript 0 4.40 2.99 5.12 8.29 4.78 2.93 8.02 2.57 3.78 6.62 2.60 2.84 0.74 1.85 2.13 1.67 4.02 3.41 3.50 2.53 2.46 2.42 1.55 8 ER1a ExonRegion 0 0.23 8.76 2.03 0.81 4.65 22.07 6.92 0.43 0.62 4.00 10.98 1.08 0.00 9.45 5.84 11.85 9.23 4.86 3.56 2.53 9.52 4.19 5.10 9 E1_Ab KnownBoundary 0 0.00 22.82 2.48 0.00 16.47 42.70 15.24 0.00 0.00 0.00 20.22 0.00 0.00 22.37 15.20 33.67 13.74 2.28 14.40 2.75 20.63 12.49 21.17 10 E1_Ac KnownBoundary 1 28.60 99.78 30.40 12.79 71.48 202.61 153.60 9.61 8.22 52.76 118.45 18.01 0.00 135.03 59.34 148.68 190.93 57.83 48.19 49.54 136.53 44.82 62.57 11 ER1b ExonRegion 1 20.03 77.90 22.34 9.54 65.04 175.76 110.81 9.04 6.94 43.85 97.24 12.99 0.00 136.18 59.36 143.35 152.10 28.14 47.29 35.02 115.27 45.20 58.28 12 ER1c ExonRegion 1 50.24 116.95 44.58 32.01 129.82 152.54 160.30 25.32 25.92 86.39 156.27 14.19 19.06 193.36 78.04 242.41 244.29 90.89 138.63 73.09 136.17 94.44 79.07 13 E1_Da KnownBoundary 0 0.00 0.00 0.00 1.76 0.00 2.38 0.00 1.89 3.56 1.67 0.00 0.00 0.00 0.00 0.00 0.00 9.26 2.57 0.00 3.20 5.99 0.00 0.00 14 E1a_E2a KnownJunction 1 14.08 37.03 69.01 48.65 32.77 12.66 3.89 45.55 31.80 130.95 223.58 6.30 37.98 178.23 84.80 85.87 428.80 53.97 77.56 99.26 208.44 59.70 26.55 15 ER1d ExonRegion 0 0.00 3.80 0.00 1.21 0.00 2.37 4.15 4.11 1.94 3.38 2.76 0.00 3.23 8.28 2.52 8.28 5.95 5.76 5.07 1.12 2.20 0.00 2.46 16 E1_Ad KnownBoundary 0 0.00 2.76 0.00 0.00 0.00 9.65 9.49 4.97 0.00 4.43 2.47 0.00 0.00 6.59 9.64 11.02 0.00 11.03 13.18 2.75 0.00 0.00 0.00 17 ER1e ExonRegion 0 0.00 3.98 2.76 1.83 1.54 9.91 2.45 4.49 1.68 5.95 0.36 0.00 1.40 3.65 2.56 4.71 3.14 4.21 3.17 4.96 0.47 0.37 2.67 18 E1_Db KnownBoundary 0 0.00 0.00 0.00 3.10 7.39 5.11 14.26 0.00 1.10 1.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 0.00 0.00 19 E1b_E2a KnownJunction 0 0.00 3.16 1.12 2.06 0.00 4.60 0.00 0.00 0.00 3.92 2.47 0.00 6.33 7.30 0.00 7.26 3.55 1.62 3.76 5.94 2.84 3.12 0.00 20 ER1f ExonRegion 0 1.66 1.48 3.90 3.48 3.32 0.97 6.48 0.73 1.75 2.12 1.85 7.05 2.18 1.20 1.43 5.68 5.75 0.93 2.50 3.70 0.49 0.23 3.63 21 E1c_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER2a ExonRegion 1 15.31 28.63 92.75 63.37 38.80 33.81 44.31 48.34 47.13 179.94 269.13 120.35 58.41 556.46 174.21 399.94 380.74 167.31 275.14 149.37 140.52 229.28 141.83 23 E2a_E3a KnownJunction 1 54.82 54.53 121.11 89.33 81.75 74.50 90.18 47.77 54.63 213.85 235.11 248.18 99.83 625.53 251.07 764.24 293.88 265.18 466.93 171.04 93.22 318.66 265.74 24 ER3a ExonRegion 0 34.10 89.37 98.27 62.32 233.09 234.18 217.86 63.49 57.67 187.09 230.03 227.96 126.82 285.35 176.12 302.64 250.06 172.12 167.85 131.74 71.91 144.15 91.58 25 E3a_E4a KnownJunction 0 34.23 178.32 117.35 51.51 356.11 359.74 482.88 70.77 44.99 223.44 274.54 281.04 120.93 293.19 186.66 113.30 241.33 66.37 109.27 125.02 56.09 109.36 43.45 26 ER4a ExonRegion 0 57.62 250.73 137.16 92.69 167.41 179.94 278.88 85.89 72.95 250.49 363.88 534.20 340.81 368.05 179.92 238.92 357.65 111.70 148.60 159.66 95.39 156.04 74.12 27 E4a_E5a KnownJunction 0 111.58 255.88 200.88 117.53 181.15 97.27 231.85 101.45 79.02 327.26 360.72 576.49 399.32 524.11 237.22 322.31 434.41 159.43 185.42 252.22 151.54 149.23 92.96 28 ER5a ExonRegion 0 113.47 193.05 175.84 126.65 154.71 125.96 200.56 91.93 87.68 324.02 366.79 642.15 419.28 515.18 234.35 310.05 437.65 190.15 216.82 210.00 177.00 162.63 106.68 29 E5a_E6a KnownJunction 1 116.54 212.40 208.66 172.24 218.25 260.30 253.10 88.84 97.22 353.77 313.45 709.58 464.09 596.51 220.29 412.28 480.69 216.06 232.57 238.16 218.07 136.37 128.13 30 ER6a ExonRegion 0 107.59 169.76 188.76 160.73 242.27 196.69 335.87 77.13 78.81 298.58 377.71 693.05 438.93 553.61 252.47 367.72 487.10 228.20 266.90 212.77 165.84 201.22 136.95 31 E6a_E7a KnownJunction 0 142.84 235.75 199.49 160.85 353.91 248.44 460.31 121.54 73.61 314.55 442.11 753.85 443.48 674.09 338.34 422.54 598.60 168.05 219.02 228.44 210.97 203.30 128.90 32 ER7a ExonRegion 0 130.57 265.97 241.28 196.91 252.46 182.81 300.21 115.96 87.39 316.29 371.13 611.52 449.47 481.76 272.87 352.32 462.56 233.07 218.63 248.68 145.11 149.88 112.20 33 E7a_E8a KnownJunction 0 211.67 351.25 278.73 238.90 233.36 232.59 305.25 131.48 101.24 320.14 425.95 731.94 393.16 424.34 345.88 422.45 540.72 232.30 172.15 288.59 147.83 150.94 128.30 34 ER8a ExonRegion 0 175.06 291.76 279.88 202.28 298.33 234.75 354.02 115.48 110.32 337.67 436.20 562.86 494.05 505.90 368.21 339.72 507.25 199.93 235.95 264.08 131.41 143.43 127.26 35 E8a_E9b KnownJunction 0 188.03 319.94 268.77 180.33 428.10 265.19 504.34 128.81 103.36 300.56 383.15 585.79 447.70 388.14 379.01 307.10 438.24 150.52 248.20 240.07 103.29 119.65 73.33 36 I8 Intron 0 13.49 11.55 4.87 4.83 16.13 30.50 20.03 7.46 4.59 7.33 4.37 12.19 14.55 5.10 5.52 5.85 6.31 2.82 4.62 3.95 11.49 18.60 7.49 37 I8_SR1 SilentIntronRegion 0 13.52 11.58 4.88 4.84 16.16 30.57 20.07 7.48 4.60 7.35 4.38 12.22 14.58 5.11 5.53 5.87 6.33 2.83 4.63 3.95 11.52 18.64 7.51 38 E9_Aa NovelBoundary 0 94.16 26.11 15.58 10.19 23.09 70.81 63.33 22.18 9.29 11.52 7.32 13.50 33.44 13.71 9.77 12.13 8.79 6.14 0.00 3.26 15.14 23.57 16.22 39 ER9a ExonRegion 0 18.38 19.31 7.71 11.53 30.58 33.48 24.50 6.68 9.44 8.43 7.19 21.26 17.65 8.96 19.49 5.98 10.83 6.27 6.76 7.22 10.18 25.26 13.66 40 E9_Ab KnownBoundary 0 24.89 19.40 19.22 13.95 52.46 66.27 37.45 12.36 18.52 17.89 0.00 17.26 26.78 2.47 22.25 6.49 0.00 5.84 0.00 4.92 13.41 24.25 16.48 41 ER9b ExonRegion 0 209.43 333.17 322.14 259.63 371.32 230.81 356.53 138.74 113.61 375.73 453.01 631.09 517.89 517.66 427.86 419.05 511.81 201.26 304.18 260.35 141.08 198.05 153.43 42 E9a_E10a KnownJunction 0 217.08 405.91 423.11 312.78 292.19 224.59 340.67 152.14 136.23 436.13 441.37 710.78 497.86 593.80 514.12 407.24 542.59 179.62 390.51 251.58 173.78 220.07 133.68 43 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER10a ExonRegion 0 213.85 337.01 437.17 349.61 399.98 276.47 422.57 168.07 128.84 450.91 426.62 650.24 521.81 472.21 423.92 378.23 500.52 142.63 285.08 241.71 123.81 190.45 122.04 45 E10a_E11a KnownJunction 1 230.49 305.67 454.66 318.64 363.92 291.08 413.67 173.13 132.38 418.24 229.43 595.99 557.11 528.23 468.76 315.81 422.44 120.50 184.19 223.71 86.24 183.88 120.79 46 ER11a ExonRegion 0 277.54 360.16 391.79 250.01 380.53 211.59 373.11 157.56 99.55 334.21 355.78 548.48 444.60 410.11 413.40 345.27 418.33 121.25 275.15 191.07 111.54 183.81 112.40 47 E11a_E12a KnownJunction 0 454.75 566.68 434.14 248.65 538.03 190.17 398.39 135.01 100.35 345.23 373.25 609.95 414.42 384.54 392.24 361.61 409.35 106.87 208.76 216.81 157.35 107.16 128.30 48 ER12a ExonRegion 0 358.55 536.98 356.63 202.96 404.95 224.56 356.87 152.45 93.74 325.34 364.08 492.73 382.69 430.00 406.73 314.04 440.17 132.41 213.21 172.91 138.69 170.60 94.94 49 E12a_E13a KnownJunction 0 400.14 744.21 466.60 249.12 495.84 277.62 506.24 151.89 97.66 321.83 306.71 608.60 421.56 414.62 398.54 334.53 428.52 206.85 309.09 201.79 151.79 153.76 96.89 50 ER13a ExonRegion 0 345.93 480.81 381.08 230.58 349.90 210.66 374.00 146.20 93.17 288.68 289.00 482.19 267.81 337.14 377.75 260.62 308.72 144.57 193.57 178.94 120.09 130.36 114.29 51 E13a_E14a KnownJunction 0 447.12 428.28 489.40 302.83 514.86 297.04 506.94 205.99 115.59 333.79 279.65 374.52 153.89 379.25 451.45 233.27 378.87 95.14 108.61 206.45 117.75 91.61 110.46 52 ER14a ExonRegion 0 287.56 318.19 470.11 289.48 568.27 296.26 456.91 210.83 108.03 360.13 347.54 419.00 252.74 435.70 449.44 252.50 376.74 100.19 177.39 213.33 98.78 180.53 101.74 53 E14_Ab KnownBoundary 0 294.42 343.43 531.32 326.00 777.84 345.82 567.71 247.47 113.08 417.14 329.66 423.29 386.50 474.25 496.32 312.05 348.29 114.41 248.10 261.17 69.93 240.77 121.98 54 ER14b ExonRegion 0 308.67 307.64 466.25 300.90 531.30 277.71 377.96 217.92 108.44 372.63 273.89 461.69 446.30 369.58 508.71 259.17 290.61 97.60 163.35 221.15 46.81 172.39 95.91 55 E14a_E15a KnownJunction 1 404.96 363.16 475.03 337.39 454.75 187.39 355.11 217.49 115.10 359.71 244.75 393.88 389.26 227.27 562.95 224.30 284.99 99.28 121.79 179.22 21.07 156.45 76.91 56 ER15a ExonRegion 0 315.39 453.23 492.53 305.66 391.18 176.09 315.92 214.05 111.50 377.89 270.63 430.39 279.91 335.14 547.02 205.01 293.67 76.93 142.26 185.13 41.90 133.87 106.02 57 E15a_E18a KnownJunction 1 293.76 609.17 562.81 297.30 328.86 161.10 441.80 220.53 105.29 389.98 328.45 529.82 162.81 293.37 530.19 184.91 477.14 81.33 158.31 218.72 79.26 145.18 76.74 58 ER15b ExonRegion 0 0.30 0.00 0.35 1.17 1.53 1.05 2.08 0.99 0.18 0.98 0.83 0.00 4.02 2.09 3.32 3.40 2.36 0.53 0.00 0.61 0.00 1.19 0.00 59 ER16a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 ER17a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 ER18a ExonRegion 0 204.70 376.47 470.73 251.49 455.53 166.56 386.86 207.56 103.89 368.16 395.58 426.58 218.69 320.81 489.65 193.36 422.18 88.38 149.76 224.44 106.79 145.52 81.60 62 E18_Da KnownBoundary 0 10.59 12.17 11.77 26.67 14.01 18.06 32.37 14.46 13.34 24.15 5.21 0.00 6.49 2.47 8.90 4.10 4.77 6.80 26.07 2.81 14.33 11.88 11.18 63 E18a_E19a KnownJunction 1 183.22 263.97 407.91 241.09 327.50 114.08 195.02 183.48 86.49 380.77 309.60 297.10 158.76 314.97 666.17 196.87 326.32 91.82 133.56 196.48 93.78 149.78 90.23 64 ER18b ExonRegion 0 8.81 5.99 9.14 16.58 5.74 5.85 16.05 5.13 7.55 12.22 5.20 5.68 1.48 3.71 4.26 3.35 8.04 6.82 6.99 2.19 4.92 4.85 3.10 65 E18b_E19a KnownJunction 0 0.00 0.00 1.09 0.00 3.82 0.00 0.00 0.00 0.00 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 0.00 0.00 66 I18 Intron 0 8.83 11.34 13.27 25.87 13.65 11.57 16.26 11.03 7.62 16.23 4.41 3.80 6.20 5.17 9.89 7.96 5.12 8.83 8.70 5.34 4.90 6.11 5.38 67 I18_AR1 ActiveIntronRegion 0 8.99 9.42 16.68 35.58 12.45 11.84 17.49 11.86 7.51 23.10 5.33 1.04 11.40 5.80 10.69 8.84 5.97 12.69 12.48 7.04 10.35 6.32 4.55 68 I18_SR2 SilentIntronRegion 0 5.52 15.31 13.52 24.58 16.37 7.42 11.21 11.27 8.52 18.83 4.22 5.75 2.14 5.27 10.19 9.69 5.62 10.23 5.74 5.69 4.29 6.08 6.05 69 I18_AR2 ActiveIntronRegion 0 9.56 7.88 15.91 27.53 10.36 14.50 14.32 11.64 8.91 14.35 3.74 6.82 3.25 3.02 10.66 7.20 6.39 5.63 8.23 4.81 2.49 8.41 6.64 70 I18_AR3 ActiveIntronRegion 0 19.61 16.03 7.62 22.57 28.48 24.64 19.64 9.52 5.12 19.81 5.38 6.53 17.61 12.34 9.47 5.51 7.62 5.54 5.91 10.85 3.07 2.90 4.08 71 E19_Aa NovelBoundary 0 46.30 47.95 30.69 42.19 67.66 39.13 40.85 35.53 20.40 32.77 6.84 5.70 13.64 7.12 15.58 8.03 8.70 8.08 4.33 14.25 5.44 5.45 0.00 72 ER19a ExonRegion 0 234.39 285.08 464.16 273.73 267.82 127.63 171.66 177.82 102.18 357.98 284.73 358.27 271.34 357.52 616.86 275.34 354.22 108.10 175.19 205.46 111.30 149.30 121.73 73 E19a_E20a KnownJunction 0 189.14 124.39 430.79 240.46 196.60 138.27 154.70 134.93 88.40 287.18 269.23 243.38 132.13 406.32 535.26 252.50 257.04 99.78 242.36 197.89 114.29 163.49 77.51 74 I19_AR1 ActiveIntronRegion 0 12.53 18.80 18.20 13.50 27.45 24.91 22.77 11.54 5.32 15.80 5.59 6.44 12.45 7.09 7.27 6.44 1.91 5.71 3.22 11.07 2.55 3.31 5.09 75 ER20a ExonRegion 0 164.04 105.96 178.97 98.79 170.19 67.56 132.70 68.33 47.05 146.08 141.71 212.41 83.04 166.73 268.55 112.45 159.15 49.97 101.36 87.62 56.90 80.40 40.00 76 ER20b ExonRegion 1 286.44 89.48 38.60 29.07 222.98 62.04 169.91 14.69 5.56 10.51 19.01 56.28 37.52 89.33 169.72 44.09 45.66 12.32 29.20 24.11 13.59 6.95 15.17 77 ER20c ExonRegion 0 47.27 17.62 8.58 6.81 36.57 11.61 29.57 4.61 1.65 2.29 5.15 30.31 14.07 15.70 31.91 5.94 9.90 2.46 4.25 6.38 1.47 1.39 0.98 78 IG32_AR1 ActiveIntergenicRegion 0 5.36 8.81 9.07 8.39 8.75 11.82 14.29 6.31 7.52 7.95 0.67 6.07 9.88 9.32 3.44 2.15 1.72 5.87 2.41 7.34 0.26 0.67 4.64