Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DNAJC27 Gene 0 11.38 10.41 8.67 10.97 15.37 20.47 12.80 9.76 9.32 7.51 5.66 9.94 7.68 6.72 4.75 5.95 4.07 4.83 5.60 6.85 3.97 8.08 7.61 2 264711 Transcript 0 7.71 5.24 4.80 5.44 7.92 8.95 5.67 4.93 3.34 3.25 1.75 2.46 1.85 1.66 2.63 1.45 0.85 1.30 1.77 1.50 0.96 2.70 2.41 3 380809 Transcript 0 2.53 4.77 2.15 1.56 17.79 4.28 16.48 2.80 1.71 3.85 3.03 12.63 15.20 6.88 1.84 8.06 3.75 2.45 5.57 4.74 1.34 6.43 1.72 4 425984 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 492985 Transcript 0 2.67 2.82 0.91 2.16 5.61 0.00 4.74 1.36 3.54 1.25 1.17 2.24 0.00 0.20 0.72 1.25 1.74 0.32 1.38 4.42 0.00 2.93 0.52 6 468750 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 494239 Transcript 0 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 3.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 8 468467 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.20 0.00 0.00 0.00 0.73 0.00 0.00 10 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 3.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.75 2.53 0.00 0.00 11 ER1b ExonRegion 0 0.00 0.00 0.87 0.00 0.28 0.00 1.20 1.18 0.17 0.05 0.00 0.00 0.00 0.00 0.00 1.36 1.51 0.60 0.00 0.64 2.04 0.99 0.00 12 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 7.64 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 3.26 0.00 0.00 0.00 13 ER1c ExonRegion 0 2.25 8.96 2.25 1.87 4.57 27.53 13.61 2.11 4.82 3.48 6.26 0.00 0.00 5.19 0.18 0.06 5.88 4.93 9.03 9.02 12.10 6.86 10.52 14 E1_Ad KnownBoundary 0 0.00 12.63 4.76 3.30 6.96 21.81 4.33 4.89 4.34 8.22 7.42 0.00 0.00 2.41 0.00 0.00 9.07 7.01 11.58 7.86 5.56 14.33 8.02 15 ER1d ExonRegion 0 0.00 6.99 4.90 2.39 6.98 12.57 2.45 5.06 6.78 7.22 4.24 0.00 0.00 2.85 7.78 0.14 3.38 10.37 6.76 10.85 6.40 9.25 7.66 16 E1a_E3a KnownJunction 0 0.00 9.54 6.27 1.83 4.33 2.10 1.72 7.02 11.60 5.69 2.00 0.00 0.00 0.00 4.70 0.00 3.74 12.85 0.00 12.40 14.09 8.14 7.60 17 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.47 18 ER2b ExonRegion 0 0.00 0.00 0.95 0.19 3.76 9.94 3.30 0.00 2.34 0.00 0.00 0.00 0.00 3.73 1.83 14.81 3.76 1.33 2.35 0.52 2.86 1.24 2.52 19 E2_Da KnownBoundary 0 0.00 0.00 1.83 0.00 7.13 16.52 0.00 0.00 1.71 0.00 0.00 0.00 0.00 2.47 0.00 18.46 7.57 2.57 9.60 2.88 2.35 2.94 0.00 20 E2a_E3a KnownJunction 0 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 3.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 21 ER2c ExonRegion 0 0.00 2.59 2.42 0.29 0.86 3.67 0.05 0.00 1.94 0.45 0.70 0.00 0.34 2.84 0.00 3.72 3.25 0.78 2.53 2.05 2.24 1.38 0.34 22 E2b_E3a KnownJunction 0 0.00 3.35 3.31 2.83 4.33 16.30 0.00 0.00 5.03 3.12 0.00 0.00 6.66 7.71 0.00 0.00 0.00 2.28 0.00 8.76 0.00 3.12 4.01 23 I2_SR1 SilentIntronRegion 0 4.93 3.73 3.03 0.00 7.83 0.00 5.83 0.79 0.02 1.50 0.00 6.14 2.81 0.00 0.00 0.00 7.50 3.76 17.55 2.44 0.00 0.00 5.55 24 ER3a ExonRegion 0 2.01 6.22 10.81 9.90 14.25 25.72 26.10 8.81 16.32 12.30 14.39 12.73 9.78 14.03 5.42 25.64 17.54 12.44 17.92 29.15 21.56 15.69 36.80 25 E3a_E4a KnownJunction 0 3.78 5.92 10.47 13.29 4.16 36.00 31.31 11.34 21.82 7.28 16.95 39.16 12.99 14.72 0.00 12.48 12.25 8.91 3.95 30.55 10.63 22.23 14.26 26 ER4a ExonRegion 0 5.05 17.23 13.60 12.50 15.71 39.48 13.01 10.91 26.80 11.76 12.84 27.77 9.45 17.05 4.43 10.02 8.77 10.48 16.02 24.29 13.38 20.42 14.56 27 E4_Da KnownBoundary 0 2.96 2.63 6.86 2.83 8.66 0.00 7.60 0.00 7.75 4.70 2.68 12.60 0.00 0.00 0.00 4.36 0.00 0.00 4.80 2.88 0.00 0.00 0.00 28 E4a_E5a KnownJunction 0 0.00 3.35 3.28 0.00 12.14 10.51 5.96 0.00 4.11 2.82 2.68 0.00 6.17 20.13 0.00 3.76 8.51 2.49 4.52 11.82 0.00 6.12 7.85 29 E4a_E6a KnownJunction 0 0.00 2.83 5.85 8.06 7.30 62.29 4.37 4.23 19.88 8.81 11.58 0.00 0.00 4.89 6.30 8.29 4.30 4.44 4.05 11.70 2.97 5.82 6.32 30 ER4b ExonRegion 0 2.67 2.82 0.91 2.16 5.61 0.00 4.74 1.36 3.54 1.25 1.17 2.24 0.00 0.20 0.72 1.25 1.74 0.32 1.38 4.42 0.00 2.93 0.52 31 ER5a ExonRegion 0 0.65 4.99 1.09 1.36 6.91 6.47 6.84 1.45 2.02 3.36 5.20 10.94 0.60 11.25 0.00 8.16 15.18 3.83 1.97 8.90 5.01 4.62 10.63 32 E5_Da NovelBoundary 0 0.00 0.00 0.00 4.73 0.00 2.33 5.92 0.00 1.07 0.00 2.26 6.30 0.00 0.00 0.00 6.41 3.46 6.22 17.51 5.82 2.29 0.00 0.00 33 E5a_E6a KnownJunction 0 3.56 6.25 0.00 1.63 3.14 8.01 6.62 2.51 2.95 3.92 14.95 18.31 0.00 12.42 0.00 3.76 4.77 1.91 0.00 8.95 5.56 8.88 10.50 34 ER6a ExonRegion 0 5.63 21.14 8.35 14.59 12.77 35.50 23.42 10.26 19.85 11.61 16.30 29.87 31.15 22.60 8.09 15.65 14.41 11.36 11.81 23.78 18.30 19.25 14.63 35 E6_Da KnownBoundary 0 7.56 21.44 10.88 7.72 7.64 5.22 16.65 12.32 22.80 7.12 14.37 18.61 26.95 29.67 0.00 12.13 24.40 15.34 26.45 28.12 14.76 25.90 7.68 36 ER6b ExonRegion 0 2.30 18.52 8.02 15.08 15.24 25.27 17.07 15.03 24.89 9.57 24.54 40.47 17.03 29.02 7.13 13.76 28.34 14.62 32.82 16.60 17.29 27.58 22.92 37 E6_Db NovelBoundary 0 0.00 13.09 0.00 6.83 13.84 23.11 15.94 6.74 9.52 8.68 22.85 6.15 6.17 13.95 9.27 9.48 15.33 4.10 12.33 9.91 11.92 13.72 23.73 38 E6c_E7a KnownJunction 0 0.00 14.41 11.27 27.60 21.65 28.00 21.51 18.61 33.45 12.38 33.38 36.01 13.31 33.14 10.38 8.37 16.55 3.77 26.26 24.10 24.59 39.68 23.13 39 ER6c ExonRegion 0 0.00 18.51 8.58 24.26 21.14 35.21 23.17 17.28 31.50 12.73 33.63 31.61 12.66 34.11 13.06 10.11 25.42 4.43 26.12 21.49 22.48 31.46 22.61 40 ER7a ExonRegion 0 2.60 16.12 9.03 19.93 18.93 25.64 22.81 16.85 22.91 13.07 13.89 32.98 34.77 22.90 4.53 15.97 21.36 15.16 15.49 24.68 13.33 22.44 18.57 41 E7_Da NovelBoundary 0 0.00 5.99 18.57 6.89 3.57 16.52 16.03 5.01 10.76 4.41 9.63 35.26 20.13 2.12 15.20 0.00 15.80 1.78 3.86 3.00 2.53 2.76 0.00 42 E7a_E9a KnownJunction 0 0.00 3.35 1.51 0.00 3.99 0.00 15.99 4.44 1.74 3.14 2.37 5.70 12.01 7.18 0.00 0.00 4.11 0.00 4.71 0.00 2.47 5.02 0.00 43 E7a_E10a KnownJunction 0 0.00 3.35 3.37 11.75 3.90 10.90 12.37 8.38 11.66 7.15 2.32 0.00 0.00 10.07 0.00 0.00 3.83 12.06 8.47 9.52 3.03 16.84 23.47 44 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 I8 Intron 0 5.27 5.64 3.93 8.06 10.24 9.91 13.87 4.93 6.69 2.45 4.72 15.40 9.49 8.09 1.80 7.25 3.79 4.44 4.72 7.03 3.27 7.77 5.90 46 I8_AR1 ActiveIntronRegion 0 1.99 6.62 3.17 5.81 9.57 7.34 14.01 4.70 6.24 2.43 3.61 24.90 9.44 7.32 0.61 5.77 1.85 0.41 2.26 5.72 1.63 8.37 4.65 47 I8_AR2 ActiveIntronRegion 0 8.02 4.57 5.84 10.09 15.20 9.76 15.04 6.40 8.49 3.24 7.32 9.27 11.46 11.69 2.73 10.20 5.08 8.37 9.05 8.82 5.74 8.38 9.03 48 I8_SR2 SilentIntronRegion 0 5.63 7.67 2.83 9.91 5.34 16.67 14.09 4.00 5.31 1.89 2.57 8.24 7.20 4.07 1.89 5.93 4.39 4.07 1.41 7.08 1.95 7.39 1.95 49 E9_Aa NovelBoundary 0 7.41 9.93 11.00 5.53 16.21 23.51 19.39 5.09 6.22 5.51 2.63 25.81 20.45 4.89 0.00 3.16 4.77 0.00 0.00 6.20 0.00 11.63 4.27 50 ER9a ExonRegion 0 0.86 8.18 4.93 2.85 20.69 4.37 17.06 3.96 1.87 5.57 4.79 18.68 19.96 11.05 5.53 13.17 2.46 2.66 8.52 8.66 1.54 11.51 5.16 51 E9_Da NovelBoundary 0 0.00 0.00 8.43 8.82 12.82 13.91 15.81 4.76 9.66 1.56 7.42 12.60 16.56 4.94 4.45 4.36 0.00 1.62 9.22 8.56 0.00 10.41 3.50 52 E9a_E10a KnownJunction 0 6.74 2.76 0.00 1.83 28.69 8.46 16.38 0.00 1.53 2.82 1.95 13.50 13.64 2.41 0.00 11.02 4.68 4.68 3.48 5.56 0.00 2.76 0.00 53 E10_Aa NovelBoundary 0 0.00 3.03 10.32 3.96 8.23 14.99 28.53 6.78 9.90 7.12 5.16 6.30 12.01 2.88 0.00 11.36 8.32 1.91 9.60 6.20 2.66 9.00 0.00 54 ER10a ExonRegion 0 10.30 6.87 6.78 18.99 28.07 29.46 27.24 9.14 19.49 11.95 14.26 13.95 23.24 20.14 3.67 16.31 8.44 11.50 10.83 20.05 7.25 25.42 27.73 55 E10_Da KnownBoundary 0 12.52 0.00 14.19 25.67 23.01 28.79 31.80 18.52 28.01 12.17 10.06 26.56 30.19 25.90 0.00 12.05 4.11 13.14 4.52 20.45 10.81 14.63 23.73 56 ER10b ExonRegion 0 5.89 9.61 8.66 19.17 19.81 29.56 24.71 10.07 22.25 14.59 16.33 34.75 27.90 29.53 2.15 25.47 14.40 17.89 15.49 19.74 18.33 13.33 20.61 57 E10b_E11a KnownJunction 0 3.11 12.23 7.69 20.41 27.76 63.66 18.06 16.10 19.76 17.30 15.06 29.71 35.06 30.43 9.52 42.30 8.79 16.95 11.86 20.84 20.57 7.90 17.07 58 E11_Aa NovelBoundary 0 3.78 0.00 2.57 1.80 0.00 2.90 0.00 8.30 1.56 2.79 2.58 12.30 0.00 0.00 0.00 0.00 4.77 14.59 4.05 6.20 0.00 2.76 0.00 59 ER11a ExonRegion 0 7.12 20.01 14.89 26.21 31.33 65.22 30.94 24.86 30.76 22.64 18.72 45.17 34.13 22.89 7.63 21.37 11.21 19.58 14.43 23.73 14.36 25.69 23.91 60 E11_Da KnownBoundary 0 7.04 14.73 13.81 7.26 8.66 27.03 17.71 9.36 18.23 18.05 9.16 30.61 21.10 9.89 0.00 0.00 0.00 5.89 0.00 5.62 0.00 12.31 11.10 61 ER11b ExonRegion 0 15.43 10.48 9.59 10.87 15.83 17.89 11.14 9.86 6.68 6.50 3.50 4.91 3.69 3.33 5.25 2.89 1.49 2.61 3.53 2.99 1.18 5.40 4.82