Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL096767.2 Gene 0 7.43 9.09 17.01 19.51 7.49 5.67 9.68 18.73 18.22 17.49 3.63 4.03 5.49 3.18 8.07 9.07 10.35 32.25 11.39 10.13 5.80 3.31 12.03 2 501515 Transcript 0 25.89 29.49 55.17 60.43 23.51 22.49 30.09 56.80 55.24 52.82 14.28 12.03 19.27 10.76 25.62 29.29 38.18 97.22 37.95 31.99 22.94 13.03 39.63 3 ER1a ExonRegion 0 0.19 0.10 0.01 0.57 0.00 0.44 0.02 0.01 0.01 0.01 0.08 0.02 0.49 0.12 0.02 0.03 0.53 0.04 0.93 0.00 0.02 0.02 0.00 4 E1_Da NovelBoundary 0 28.60 0.00 18.10 22.54 0.00 21.86 5.83 13.97 0.00 6.61 8.74 13.95 20.13 7.53 0.00 20.34 40.49 2.57 4.71 0.00 3.03 13.47 4.44 5 E1a_E2a KnownJunction 0 12.30 7.56 12.83 10.06 3.31 19.65 3.44 2.30 2.23 1.50 10.79 0.00 12.01 4.53 4.57 6.58 25.34 2.32 18.07 4.99 16.87 9.55 10.93 6 Ix Intron 0 15.15 3.28 21.25 39.98 5.75 30.85 10.42 18.43 23.05 20.80 16.61 2.32 4.84 24.11 20.34 24.48 20.67 38.63 18.24 17.51 15.77 8.20 13.14 7 Ix_SR1 SilentIntronRegion 0 15.26 3.30 21.39 40.25 5.78 31.04 10.50 18.56 23.21 20.94 16.71 2.34 4.87 24.27 20.47 24.65 20.82 38.90 18.37 17.64 15.89 8.26 13.23 8 Ix Intron 0 26.41 6.29 40.70 37.97 16.02 38.98 14.76 31.11 33.07 31.10 24.69 8.51 15.81 27.91 32.92 44.00 28.66 71.84 28.61 25.69 19.06 14.21 17.10 9 Ix_SR1 SilentIntronRegion 0 26.46 6.31 40.78 38.05 16.05 39.06 14.79 31.17 33.13 31.16 24.74 8.53 15.84 27.96 32.99 44.08 28.72 71.98 28.67 25.74 19.09 14.24 17.13 10 Ix Intron 0 21.29 4.61 51.22 44.03 9.48 38.71 8.44 28.46 29.73 28.81 30.94 13.20 10.94 29.46 38.64 36.21 27.12 54.14 29.78 18.99 23.72 11.22 27.87 11 Ix_AR2 ActiveIntronRegion 0 28.71 6.13 43.43 45.11 12.15 47.26 12.02 36.06 36.37 33.16 38.30 23.99 9.63 29.26 43.36 45.97 36.13 54.23 34.53 22.35 30.72 15.24 31.88 12 Ix_SR1 SilentIntronRegion 0 20.40 4.57 72.55 54.87 10.36 43.11 7.82 30.65 32.77 32.80 32.18 8.61 14.04 35.50 42.54 35.43 26.01 67.70 34.89 18.32 25.37 11.12 30.11 13 I1 Intron 0 37.53 63.15 165.93 108.15 71.28 215.16 60.46 139.87 130.19 132.27 29.86 8.22 2.39 40.27 34.58 31.16 38.57 152.23 79.66 95.85 48.03 33.93 49.17 14 I1_AR1 ActiveIntronRegion 0 10.04 16.72 103.57 54.98 40.25 108.68 21.27 77.35 78.75 89.13 28.06 10.48 4.36 36.42 21.24 17.93 25.80 107.15 48.80 54.91 31.08 10.29 24.63 15 I1_SR1 SilentIntronRegion 0 5.29 2.03 5.64 12.13 7.76 35.21 1.06 7.26 7.66 16.74 3.87 0.87 0.00 1.46 4.64 2.08 1.98 17.00 10.51 2.77 3.97 1.25 0.59 16 I1_AR2 ActiveIntronRegion 0 23.56 43.65 22.87 28.71 27.29 136.07 32.39 30.77 26.10 29.90 16.49 0.00 0.00 17.43 14.31 11.29 8.14 63.93 43.75 23.12 12.34 29.59 25.26 17 I1_AR3 ActiveIntronRegion 0 46.12 77.68 187.72 125.81 81.62 249.33 72.93 161.00 147.89 147.45 30.81 7.72 1.86 42.07 39.07 35.60 43.09 167.98 89.88 109.73 53.91 41.27 57.18 18 Ix Intron 0 11.31 4.46 36.92 46.13 10.69 37.99 9.57 34.85 35.60 34.09 24.81 3.02 4.22 50.79 41.89 50.61 30.84 60.99 25.75 17.91 29.72 23.31 32.62 19 Ix_SR2 SilentIntronRegion 0 13.48 4.15 45.68 50.91 10.80 39.22 8.85 39.78 37.42 32.01 22.90 2.69 4.12 44.84 42.84 54.69 29.35 59.08 28.70 16.80 26.53 24.78 33.79 20 Ix_AR2 ActiveIntronRegion 0 2.50 7.20 38.16 39.11 7.01 29.41 7.23 28.66 36.41 29.13 13.30 0.00 0.00 54.21 35.34 41.31 37.89 49.04 20.00 27.06 14.59 14.33 25.78 21 Ix_AR1 ActiveIntronRegion 0 11.24 4.58 30.75 46.02 11.41 43.93 11.35 34.03 36.44 40.63 31.07 3.24 5.24 61.53 42.90 49.29 36.54 71.06 24.10 18.56 38.10 23.94 35.16 22 Ix_SR1 SilentIntronRegion 0 4.00 4.61 13.67 25.46 9.30 15.39 8.11 15.50 23.65 24.58 17.83 5.13 2.92 43.45 36.56 38.73 16.43 41.43 18.83 17.94 23.36 17.39 20.90 23 Ix Intron 0 5.46 3.73 13.76 14.90 7.45 11.21 6.47 12.61 16.50 12.77 14.96 3.68 4.01 16.92 19.27 19.98 14.35 46.78 16.44 7.22 24.84 10.75 14.96 24 Ix_SR2 SilentIntronRegion 0 1.72 3.06 14.61 14.21 8.55 10.11 8.14 11.73 15.59 12.96 14.58 3.35 3.96 14.82 18.21 12.68 15.69 44.87 14.99 6.14 27.60 10.16 14.23 25 Ix_AR1 ActiveIntronRegion 0 0.91 4.07 14.18 14.60 4.20 2.88 12.10 17.28 14.29 16.71 13.53 4.33 8.71 26.45 17.41 14.86 16.03 32.47 9.56 2.13 31.48 11.61 16.36 26 Ix_SR1 SilentIntronRegion 0 7.46 4.08 13.38 15.32 6.96 11.93 5.57 13.05 17.06 12.67 15.24 3.86 3.98 17.93 19.91 23.87 13.69 48.14 17.35 7.88 23.43 11.09 15.37 27 Ix Intron 0 6.35 2.33 4.78 8.42 2.92 7.60 3.47 10.96 10.14 6.15 10.12 3.24 3.73 11.20 13.65 12.17 10.98 33.38 7.99 5.22 13.22 7.50 18.58 28 Ix_SR1 SilentIntronRegion 0 6.36 2.33 4.79 8.44 2.93 7.62 3.47 10.99 10.16 6.17 10.14 3.24 3.74 11.22 13.67 12.19 11.01 33.45 8.01 5.23 13.25 7.52 18.62 29 Ix Intron 0 18.74 6.34 34.84 26.08 13.01 25.61 14.19 26.02 28.23 29.84 24.34 12.04 11.11 30.87 50.54 36.69 25.11 47.07 17.87 17.24 42.30 30.67 34.05 30 Ix_AR2 ActiveIntronRegion 0 11.14 2.24 29.01 23.57 9.40 15.45 13.22 21.78 27.52 19.03 15.26 10.19 12.07 33.39 48.25 32.13 18.25 31.11 24.12 11.36 23.69 28.19 30.62 31 Ix_AR1 ActiveIntronRegion 0 31.28 4.07 46.43 31.80 21.41 25.88 13.09 43.21 43.23 35.04 17.61 38.48 12.51 41.87 84.78 38.97 21.64 54.61 19.82 24.59 59.01 33.80 26.43 32 Ix_SR1 SilentIntronRegion 0 20.05 7.29 35.90 26.58 13.59 27.85 14.51 26.53 28.09 32.10 26.57 11.75 10.93 30.19 50.27 37.76 26.78 50.42 16.60 18.35 45.92 31.28 35.20 33 Ix Intron 0 14.95 3.19 22.93 22.76 11.70 26.11 12.17 21.95 25.79 27.21 30.76 5.05 7.64 55.41 66.51 56.65 29.97 53.33 23.56 21.95 37.30 25.46 38.84 34 Ix_SR1 SilentIntronRegion 0 17.08 3.66 26.01 25.96 13.20 28.68 13.37 25.16 29.39 31.23 35.10 5.85 8.68 62.97 75.04 64.27 33.53 60.60 26.43 25.04 41.92 28.82 44.30 35 E2_Aa NovelBoundary 0 29.63 11.84 3.99 7.06 26.15 15.62 26.32 9.69 5.44 5.21 0.00 0.00 0.00 0.00 20.15 8.03 4.21 11.23 4.71 14.83 2.78 11.33 20.32 36 ER2a ExonRegion 0 65.18 80.82 152.68 170.66 67.23 47.38 86.81 168.08 163.48 156.94 31.96 36.07 45.31 27.62 72.28 81.25 88.66 289.30 94.83 90.99 51.95 29.52 107.96