Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL031588.1 Gene 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2 499371 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 Ix Intron 0 6.80 13.91 7.95 8.84 8.18 6.46 26.76 15.89 3.43 14.62 16.13 14.63 10.22 20.66 17.31 29.88 20.54 42.67 5.61 25.04 0.23 1.51 1.67 6 Ix_AR1 ActiveIntronRegion 0 7.41 7.64 4.45 8.03 10.46 6.66 25.69 14.31 0.00 4.38 15.43 2.89 3.65 30.68 23.48 36.44 21.46 51.22 3.60 15.05 0.00 3.55 5.44 7 Ix_SR1 SilentIntronRegion 0 6.78 14.31 8.17 8.91 8.07 6.47 26.88 16.01 3.64 15.24 16.20 15.34 10.63 20.12 16.99 29.56 20.53 42.27 5.74 25.67 0.24 1.40 1.46 8 Ix Intron 0 5.47 8.65 12.65 9.58 8.11 8.54 21.66 14.65 2.45 17.66 14.43 5.12 7.08 25.41 16.87 27.73 20.21 67.22 8.89 34.31 0.39 0.96 1.97 9 Ix_AR13 ActiveIntronRegion 0 7.31 11.84 21.98 15.64 7.30 9.36 18.89 24.86 4.13 29.94 25.14 6.77 8.91 31.70 22.37 40.80 26.33 103.70 13.16 44.29 0.39 1.65 1.03 10 Ix_SR3 SilentIntronRegion 0 5.80 9.82 9.99 7.72 9.71 10.37 24.06 13.43 1.55 12.32 12.78 2.26 3.18 22.32 14.13 28.02 15.90 44.73 7.31 30.77 0.44 0.56 2.37 11 Ix_AR12 ActiveIntronRegion 0 5.39 7.53 13.48 11.11 7.70 6.49 21.05 14.67 2.04 17.98 11.28 2.94 5.57 28.31 16.93 20.54 21.71 72.06 8.35 37.56 1.09 1.06 1.54 12 Ix_SR2 SilentIntronRegion 0 5.49 4.82 13.66 10.16 6.47 9.10 23.27 13.43 2.68 17.34 13.71 4.17 6.21 21.36 17.62 21.82 23.51 72.96 11.03 35.64 0.20 1.13 2.85 13 Ix_AR11 ActiveIntronRegion 0 4.23 2.03 7.35 6.81 5.35 5.50 9.08 7.65 0.71 10.65 6.63 0.00 9.38 19.03 10.36 14.86 31.59 80.77 3.19 18.24 0.00 0.00 9.23 14 Ix_AR10 ActiveIntronRegion 0 4.23 2.03 6.91 7.93 4.38 4.00 6.14 7.07 2.47 9.18 4.22 0.00 1.71 17.57 16.35 11.62 29.71 76.43 3.47 16.83 0.00 0.00 8.81 15 Ix_AR9 ActiveIntronRegion 0 2.12 2.03 4.90 8.63 0.89 1.83 6.62 6.91 2.47 10.32 5.15 0.00 0.00 17.32 11.61 10.40 26.41 68.98 6.37 21.28 0.00 0.00 5.87 16 Ix_AR8 ActiveIntronRegion 0 3.41 2.03 3.06 7.50 0.00 1.22 6.84 6.43 2.47 11.79 6.55 0.96 0.00 13.26 11.12 5.94 21.64 55.43 6.37 29.79 0.00 0.00 5.06 17 Ix_AR7 ActiveIntronRegion 0 2.12 0.27 2.45 8.45 1.96 1.22 10.77 7.14 2.47 10.48 9.92 4.33 0.63 13.32 12.77 8.72 12.32 42.50 3.40 36.17 0.00 0.00 2.74 18 Ix_AR6 ActiveIntronRegion 0 1.81 2.32 2.33 7.66 10.19 2.53 10.97 11.03 2.23 13.11 10.03 4.33 10.05 18.41 16.99 13.45 11.63 53.67 4.55 39.92 0.00 0.00 2.94 19 Ix_AR5 ActiveIntronRegion 0 0.00 4.71 4.85 5.70 10.70 5.17 14.56 12.96 0.00 18.19 9.23 4.33 16.84 23.77 13.45 26.34 19.21 80.38 6.37 34.62 0.00 0.00 2.40 20 Ix_AR4 ActiveIntronRegion 0 1.62 5.62 9.32 3.89 5.29 6.29 16.87 9.56 2.12 18.33 10.13 3.87 8.34 22.02 17.73 25.99 12.47 61.76 5.26 27.67 0.42 0.00 2.23 21 Ix_SR1 SilentIntronRegion 0 5.24 11.89 9.95 8.05 12.12 10.37 26.55 12.25 2.73 15.57 14.28 8.04 10.92 27.52 14.24 33.18 22.05 65.69 6.94 31.65 0.00 1.39 1.74 22 Ix_AR1 ActiveIntronRegion 0 9.19 8.80 3.96 5.51 2.90 0.99 17.96 6.99 1.00 5.56 6.29 27.22 16.76 31.20 19.54 17.74 7.16 10.97 13.83 20.78 0.00 0.00 0.00 23 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00