Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CTA-217C2.1 Gene 0 76.88 26.83 32.44 66.20 86.58 92.78 32.12 74.67 72.10 78.75 26.43 24.54 22.90 50.41 63.88 40.52 32.69 65.01 43.43 63.89 22.25 49.13 58.76 2 426282 Transcript 0 44.21 14.56 22.92 32.58 43.06 56.35 17.88 38.13 40.12 48.99 15.29 17.47 12.02 27.41 45.85 27.06 20.90 44.83 24.86 36.97 13.16 30.90 42.56 3 432502 Transcript 0 0.00 0.00 1.35 0.00 0.54 0.00 0.00 1.56 2.59 2.52 0.19 0.00 0.00 1.62 0.29 0.00 0.00 2.40 1.27 5.63 0.00 1.46 3.23 4 ER1a ExonRegion 0 11.22 9.23 3.23 1.30 15.60 39.49 12.91 5.66 13.39 14.77 11.99 0.00 1.60 14.43 22.60 26.48 14.60 34.87 7.46 20.84 9.07 8.61 25.71 5 E1_Ab KnownBoundary 1 15.71 2.96 5.23 4.06 6.88 21.18 9.72 12.49 11.52 18.48 14.11 0.00 0.00 7.77 14.22 47.77 8.42 27.11 4.80 26.14 8.83 14.27 0.00 6 ER1b ExonRegion 0 5.55 1.34 4.06 2.01 3.17 3.49 1.32 5.86 11.96 16.35 7.24 0.11 0.00 11.98 8.56 13.88 10.55 7.59 4.86 14.27 8.14 5.97 13.61 7 E1_Da NovelBoundary 0 3.78 0.00 3.96 0.00 0.00 0.00 0.00 7.56 1.59 7.90 12.63 0.00 7.30 2.47 0.00 7.95 3.83 14.80 0.00 12.08 2.47 9.19 23.22 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.50 3.71 0.00 0.00 0.00 0.00 5.81 0.00 4.21 0.00 0.00 0.00 0.00 3.12 12.98 9 E1_Db NovelBoundary 0 3.56 0.00 1.36 4.00 3.99 8.06 0.00 1.85 5.90 10.37 12.85 0.00 0.00 9.95 10.75 37.51 17.86 28.06 26.82 29.91 8.59 17.70 69.23 10 E1b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.75 0.00 0.00 0.00 11 ER1c ExonRegion 0 0.00 0.00 2.70 0.00 1.07 0.00 0.00 3.11 5.19 5.05 0.39 0.00 0.00 3.25 0.58 0.00 0.00 4.80 2.55 8.51 0.00 2.92 6.46 12 I1 Intron 0 15.46 8.20 8.02 16.76 18.28 12.94 15.99 12.07 11.33 12.97 4.66 16.38 21.34 10.83 10.59 17.32 12.94 13.30 10.73 26.12 3.84 10.56 22.81 13 I1_AR1 ActiveIntronRegion 0 4.93 1.39 12.51 10.58 4.40 10.30 5.99 13.42 9.08 13.12 6.62 4.50 1.06 18.39 16.75 22.00 15.85 24.70 9.61 16.04 6.04 6.86 30.60 14 I1_SR1 SilentIntronRegion 0 17.51 13.50 13.17 23.56 24.79 18.20 23.63 15.62 13.48 12.33 6.99 24.92 27.30 16.00 14.43 23.08 17.48 18.75 17.71 33.37 4.57 11.63 28.63 15 I1_AR2 ActiveIntronRegion 0 23.04 8.61 13.62 27.23 19.69 23.47 21.75 15.84 15.40 22.57 8.77 18.02 21.49 16.97 12.64 32.35 22.62 23.06 16.37 42.46 6.44 15.12 39.07 16 I1_SR2 SilentIntronRegion 0 7.20 5.35 1.65 8.23 11.60 9.91 8.64 4.94 6.60 9.22 3.26 17.06 18.24 7.18 8.20 8.18 9.04 6.56 4.22 22.03 3.04 5.98 11.94 17 I1_AR3 ActiveIntronRegion 1 14.19 12.70 8.62 18.21 43.52 20.26 34.58 13.61 11.31 17.55 5.39 14.44 46.16 15.27 19.96 17.28 25.10 12.62 14.26 40.95 8.77 16.96 28.56 18 I1_AR4 ActiveIntronRegion 0 12.80 9.55 3.90 4.82 25.02 10.53 13.09 4.18 6.09 7.63 4.00 9.67 37.74 6.46 17.00 5.11 7.45 6.83 4.30 11.78 2.82 13.66 32.64 19 I1_AR5 ActiveIntronRegion 0 28.52 13.36 11.32 19.92 62.18 23.14 24.15 13.33 13.29 17.15 11.41 16.70 50.70 7.04 19.48 16.13 22.79 17.33 10.77 25.43 3.36 36.02 40.83 20 I1_SR3 SilentIntronRegion 0 15.89 6.01 4.96 15.23 15.26 8.79 11.65 11.40 11.91 13.59 2.56 16.07 21.75 6.09 6.00 11.40 8.78 6.96 4.91 23.88 2.20 9.81 15.85 21 I1_AR6 ActiveIntronRegion 0 9.72 2.25 2.31 9.01 9.75 3.78 8.18 10.61 9.04 8.93 2.76 4.20 14.46 6.08 6.38 11.30 10.98 17.16 8.58 14.15 5.24 6.93 22.79 22 I1_SR4 SilentIntronRegion 0 16.14 4.73 2.83 7.02 11.96 7.54 9.39 6.14 6.47 9.88 1.84 3.41 8.23 5.39 8.11 14.87 4.13 7.61 8.35 10.39 2.23 9.93 16.28 23 E2_Aa NovelBoundary 0 12.59 0.00 26.14 27.00 18.00 11.87 13.20 23.62 16.70 20.04 10.79 17.56 19.64 11.89 18.17 7.95 15.33 8.58 8.47 7.61 8.03 16.59 15.11 24 ER2a ExonRegion 0 34.82 6.36 21.89 19.48 15.08 28.87 10.48 23.01 25.03 39.87 15.44 17.13 5.19 39.61 52.63 19.21 23.00 37.75 18.12 27.22 17.58 18.33 34.58 25 E2_Da NovelBoundary 0 112.91 71.04 91.92 128.69 63.92 77.06 144.15 84.69 73.67 92.97 18.90 12.45 39.93 11.65 32.39 75.28 30.20 96.46 35.30 103.99 58.94 10.41 86.30 26 E2a_E3a KnownJunction 0 60.31 14.73 45.65 37.99 22.58 51.45 11.31 46.70 57.55 81.18 26.59 36.76 19.64 38.79 91.72 41.01 27.12 89.21 36.90 57.97 17.17 48.07 72.05 27 ER3a ExonRegion 0 78.44 25.02 35.99 67.04 62.67 69.97 25.50 75.80 78.95 87.93 38.90 27.92 25.44 73.38 92.19 45.20 40.14 89.62 46.69 76.06 29.05 47.29 71.05 28 E3_Da KnownBoundary 0 360.36 72.29 54.61 118.03 116.30 102.61 54.89 113.98 97.19 97.51 20.01 43.66 33.28 38.44 56.12 63.32 26.09 41.08 21.46 72.16 2.53 64.36 30.56 29 ER3b ExonRegion 0 114.70 42.47 43.81 104.16 162.04 161.93 54.73 115.27 101.13 105.43 22.44 33.47 33.68 44.23 56.48 48.58 35.56 62.31 61.83 78.80 21.98 76.35 67.51 30 IG33_AR4 ActiveIntergenicRegion 0 6.47 9.15 1.41 7.47 17.96 29.62 6.16 3.92 1.35 6.33 7.14 10.99 2.80 19.11 15.57 9.37 2.86 1.28 6.31 1.80 0.00 14.54 6.83 31 IG33_AR3 ActiveIntergenicRegion 0 6.35 9.83 1.23 6.81 18.73 33.01 4.63 3.46 1.24 5.73 7.73 12.99 4.69 19.76 13.54 8.92 1.65 1.85 9.56 1.77 0.00 5.21 6.85