Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C22orf40 Gene 0 36.29 20.95 35.26 31.77 21.72 34.61 11.96 23.78 13.81 23.92 30.78 15.94 14.67 40.58 46.77 29.79 32.83 24.77 21.23 17.65 27.63 15.80 16.43 2 314567 Transcript 0 1.17 0.96 1.26 0.84 0.37 5.58 0.73 2.14 1.27 4.26 6.95 0.00 1.18 3.06 9.58 4.52 1.82 5.58 5.61 5.06 3.05 0.29 0.81 3 474256 Transcript 0 14.22 6.25 11.24 5.06 8.66 32.31 14.13 6.98 3.39 1.37 2.68 0.00 0.00 17.25 4.45 12.65 12.34 4.23 20.42 17.26 3.15 0.00 12.04 4 444576 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 475605 Transcript 0 17.11 9.34 2.57 0.00 11.12 66.16 12.98 8.38 3.44 1.67 12.48 0.00 0.00 9.59 14.09 11.88 17.95 27.19 4.33 9.46 12.48 0.00 8.11 6 381037 Transcript 0 0.00 6.64 2.84 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 2.30 0.00 0.00 0.00 2.11 0.00 0.00 2.41 0.00 0.00 7 404744 Transcript 0 0.00 0.00 0.00 1.43 0.67 0.00 0.50 0.43 0.00 0.00 0.00 0.00 0.00 0.61 0.36 0.00 0.00 0.00 0.00 1.06 2.31 0.00 0.00 8 404583 Transcript 0 0.00 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.34 0.00 0.00 0.00 0.00 1.49 0.00 1.73 0.00 0.00 1.36 2.60 0.00 9 ER1a ExonRegion 0 1.17 0.96 1.26 0.84 0.37 5.58 0.73 2.14 1.27 4.26 6.95 0.00 1.18 3.06 9.58 4.52 1.82 5.58 5.61 5.06 3.05 0.29 0.81 10 E1_Ab KnownBoundary 0 0.00 3.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.05 0.00 0.00 0.00 0.00 11 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Ae KnownBoundary 0 3.19 6.31 2.25 1.60 0.00 4.49 4.24 3.12 1.30 1.32 7.32 0.00 0.00 0.00 0.00 3.25 0.00 1.87 0.00 2.43 0.00 0.00 3.67 14 ER1b ExonRegion 0 0.85 5.02 0.16 1.00 0.00 0.73 1.94 0.23 0.66 1.15 2.83 0.00 0.00 1.62 6.00 0.20 0.00 0.00 6.37 2.27 0.00 0.00 1.17 15 ER1c ExonRegion 1 3.17 6.10 3.06 1.36 0.00 5.50 2.65 3.46 1.24 1.72 3.87 0.00 0.00 1.62 11.61 2.97 0.00 0.00 7.96 4.26 0.00 0.00 2.94 16 ER1d ExonRegion 0 5.93 8.54 3.68 1.36 0.00 6.97 2.65 3.46 1.24 2.29 5.41 0.00 0.00 5.20 14.51 2.97 0.00 0.00 9.56 4.26 0.00 0.00 2.94 17 ER1e ExonRegion 0 31.62 17.81 10.69 6.15 9.00 64.41 14.84 10.89 5.09 8.34 24.07 0.52 0.28 30.46 42.46 23.33 25.81 23.52 20.95 18.38 15.03 6.88 17.09 18 E1a_E2b KnownJunction 0 51.56 18.62 7.54 7.66 16.38 61.27 8.57 3.78 5.76 12.01 30.96 0.00 0.00 34.96 50.19 42.30 27.68 20.15 26.17 14.64 26.93 14.33 11.18 19 E1a_E3a KnownJunction 0 14.22 6.25 11.24 5.06 8.66 32.31 14.13 6.98 3.39 1.37 2.68 0.00 0.00 17.25 4.45 12.65 12.34 4.23 20.42 17.26 3.15 0.00 12.04 20 E1a_E5a KnownJunction 0 17.11 9.34 2.57 0.00 11.12 66.16 12.98 8.38 3.44 1.67 12.48 0.00 0.00 9.59 14.09 11.88 17.95 27.19 4.33 9.46 12.48 0.00 8.11 21 ER2a ExonRegion 0 22.22 9.15 4.29 4.77 5.35 26.59 4.63 3.46 1.85 5.73 13.53 0.00 0.00 24.36 30.46 17.83 14.85 8.31 9.56 8.51 8.81 10.42 14.68 22 ER2b ExonRegion 0 21.37 11.00 13.07 18.00 9.44 25.28 4.67 9.15 5.23 16.75 17.65 7.85 3.73 23.23 18.42 14.70 17.39 11.10 10.89 8.26 14.32 13.39 16.49 23 E2a_E3a KnownJunction 0 7.56 2.76 11.68 28.90 15.20 13.34 1.99 9.61 6.60 14.88 26.95 5.70 13.47 20.37 20.03 4.36 17.95 5.60 7.81 11.19 23.35 5.51 4.35 24 ER3a ExonRegion 0 9.67 8.87 17.26 25.01 12.74 15.92 4.85 17.82 7.00 17.35 30.71 17.41 8.90 43.05 47.17 24.73 37.91 16.55 24.14 23.18 39.46 18.77 15.14 25 E3_Da NovelBoundary 0 3.19 0.00 13.45 12.82 0.00 2.50 0.00 11.17 8.83 12.46 4.37 0.00 12.99 39.73 27.20 22.64 11.78 15.25 15.25 8.12 9.88 12.37 14.00 26 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 2.72 3.12 0.00 27 E3b_E4a KnownJunction 0 0.00 6.64 2.84 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 2.30 0.00 0.00 0.00 2.11 0.00 0.00 2.41 0.00 0.00 28 E3b_E5a KnownJunction 0 6.74 9.60 15.32 20.28 15.70 2.21 0.00 19.84 5.90 17.22 16.16 0.00 6.17 14.24 15.20 28.88 17.77 11.44 3.48 11.06 14.33 20.15 26.63 29 E3c_E4a KnownJunction 0 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 30 ER3b ExonRegion 0 6.35 9.35 14.62 20.81 9.99 4.77 0.18 19.93 6.18 14.45 12.24 0.00 6.57 31.18 28.63 31.50 20.25 16.14 11.89 10.07 17.48 17.64 20.95 31 ER3c ExonRegion 0 0.00 0.00 0.00 1.36 1.34 0.00 0.99 0.86 0.00 0.00 0.00 0.00 0.00 1.22 0.73 0.00 0.00 0.00 0.00 2.13 2.20 0.00 0.00 32 E4_Aa NovelBoundary 0 0.00 3.35 12.06 5.23 4.07 13.23 2.16 4.07 2.89 7.41 12.27 0.00 0.00 7.65 0.00 0.00 4.77 0.00 12.42 0.00 3.09 0.00 0.00 33 ER4a ExonRegion 0 3.48 2.68 1.88 5.11 3.35 4.56 0.52 2.14 1.14 1.38 3.21 1.27 1.68 7.29 6.23 6.16 2.74 6.50 2.64 2.70 3.24 4.32 1.96 34 E4_Da NovelBoundary 0 6.67 9.93 9.34 2.06 12.39 19.82 6.14 6.41 5.12 5.29 22.37 0.00 6.01 7.06 11.37 24.27 7.85 6.96 0.00 8.95 6.30 0.00 10.50 35 E4a_E5a KnownJunction 0 0.00 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 36 E5_Aa NovelBoundary 0 10.59 15.39 9.43 9.59 7.98 21.86 1.81 3.08 4.46 4.27 11.69 0.00 0.00 15.01 8.90 7.95 4.77 10.82 4.80 6.14 2.72 0.00 0.00 37 ER5a ExonRegion 0 29.17 15.63 34.29 34.26 24.41 48.24 14.17 28.62 14.53 27.66 34.17 6.61 8.39 57.00 48.51 26.20 47.91 37.91 21.48 19.97 40.64 16.34 17.95 38 E5_Da KnownBoundary 0 70.90 59.27 50.12 42.62 42.28 67.40 28.57 43.66 23.64 42.52 37.85 0.00 19.48 70.99 61.31 36.06 61.80 48.42 25.69 25.12 44.85 19.53 16.48 39 ER5b ExonRegion 0 75.82 48.21 69.52 51.37 34.95 52.30 23.41 33.76 21.61 35.03 43.86 13.38 14.81 60.06 74.45 45.03 43.28 35.07 35.11 27.07 39.76 25.28 28.03 40 E5_Db KnownBoundary 0 76.31 58.61 88.70 81.01 59.34 84.78 28.31 61.36 34.84 66.73 95.18 18.91 40.26 59.22 105.32 64.34 85.18 25.25 26.26 34.07 47.32 19.04 27.23 41 ER5c ExonRegion 0 61.87 33.65 60.90 55.34 38.19 50.53 18.62 42.00 25.41 39.98 50.08 40.03 34.93 60.42 75.16 52.38 51.95 35.43 32.15 25.76 39.89 25.23 24.83 42 E5_Dc KnownBoundary 0 58.53 16.71 24.30 23.34 29.12 28.45 4.11 17.46 11.14 10.58 24.90 24.61 39.45 27.90 22.25 34.01 4.49 20.60 4.24 13.93 6.05 8.21 0.00 43 ER5d ExonRegion 0 20.36 4.77 6.30 4.04 11.81 10.81 2.05 1.73 0.77 3.32 8.66 10.60 12.78 14.39 15.71 13.94 3.30 2.87 1.54 3.15 1.98 4.17 0.00 44 ER5e ExonRegion 0 8.47 2.03 4.90 0.00 0.00 1.83 1.32 1.73 0.00 2.29 3.87 0.00 4.69 1.62 0.00 8.92 3.30 1.85 0.00 0.00 0.00 4.17 0.00 45 ER5f ExonRegion 0 4.23 2.03 2.60 0.00 0.00 0.23 0.99 1.30 0.00 0.72 0.72 0.00 2.93 1.42 0.00 5.57 0.00 1.85 0.00 0.00 0.00 3.39 0.00 46 ER5g ExonRegion 0 0.00 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.92 0.00 0.00 0.00 2.08 0.00