Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATXN10 Gene 0 138.21 460.03 217.96 292.46 281.85 350.97 198.62 246.01 205.14 288.84 223.34 188.78 142.85 218.25 206.05 154.18 189.59 240.38 231.75 284.79 157.90 175.93 111.84 2 252934 Transcript 0 35.91 92.61 53.87 72.90 68.75 133.91 53.94 58.28 41.04 59.13 39.45 18.46 9.71 39.81 32.08 24.01 49.15 43.69 54.45 64.94 28.83 23.17 21.41 3 457846 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.00 1.15 0.00 0.00 0.00 0.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 381061 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 396011 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.08 0.04 0.00 0.00 0.00 0.00 6 498009 Transcript 0 0.76 0.73 2.45 0.36 0.24 0.33 1.29 0.92 0.82 1.08 1.55 0.38 0.00 4.47 1.65 2.11 0.34 2.87 0.29 0.77 2.67 0.18 0.27 7 470722 Transcript 0 1.43 2.77 0.00 0.65 0.00 0.00 2.71 0.00 0.00 0.00 0.00 1.18 0.00 0.91 0.70 4.04 4.45 0.00 2.12 2.17 0.00 0.00 0.00 8 476998 Transcript 0 0.43 0.41 0.00 0.82 0.00 0.00 1.34 0.52 0.00 0.69 0.39 0.72 0.00 0.00 0.00 0.60 0.67 1.67 0.00 0.00 0.45 0.00 1.19 9 483549 Transcript 1 6.07 1.02 3.11 2.95 5.74 0.52 7.77 4.47 2.48 4.89 1.70 10.71 24.38 1.79 2.76 3.36 5.62 4.92 5.81 5.68 1.55 1.65 3.61 10 435026 Transcript 1 9.22 12.27 1.97 7.74 3.72 0.59 7.41 4.69 5.19 3.19 0.98 14.46 15.42 0.00 1.77 1.26 4.14 1.60 0.49 2.42 1.90 2.05 4.38 11 493643 Transcript 0 0.65 1.25 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 451241 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 464482 Transcript 0 2.63 5.69 4.72 3.54 1.00 2.51 7.99 4.33 2.29 4.66 2.16 7.45 4.62 2.72 2.34 6.65 6.44 8.22 6.27 7.67 3.14 1.56 6.76 14 402380 Transcript 0 1.20 0.43 1.32 3.44 6.83 0.04 2.04 0.40 1.04 1.01 0.59 5.25 3.74 0.06 1.16 5.66 1.85 2.75 1.80 2.71 1.23 0.03 2.13 15 ER1a ExonRegion 1 24.61 41.27 12.62 3.28 20.99 114.02 40.99 2.88 7.36 12.06 54.99 4.22 1.56 61.32 41.55 32.20 68.98 44.06 50.64 54.06 38.08 20.25 21.84 16 E1_Ab KnownBoundary 1 159.21 218.45 75.07 32.40 131.24 502.67 205.40 21.44 48.70 56.97 252.33 12.30 18.67 281.24 158.23 166.96 270.78 308.16 209.79 219.30 168.71 101.40 119.34 17 ER1b ExonRegion 1 31.09 111.46 68.52 57.75 36.76 150.43 54.21 60.96 79.01 115.80 141.12 19.95 12.91 199.61 113.65 98.34 151.20 198.12 125.16 183.17 175.98 84.74 80.03 18 E1a_E4a KnownJunction 1 58.31 481.76 198.37 188.55 198.47 449.34 208.71 272.94 205.61 337.84 371.20 99.63 51.78 420.69 205.08 241.56 362.32 455.28 258.17 389.77 412.30 193.19 202.57 19 ER2a ExonRegion 0 1.51 1.47 3.60 0.72 0.48 0.66 2.57 1.84 1.64 0.63 3.09 0.76 0.00 4.11 3.29 4.22 0.68 3.16 0.57 1.55 2.19 0.37 0.55 20 E2a_E4a KnownJunction 0 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 1.53 0.00 0.00 0.00 4.83 0.00 0.00 0.00 2.57 0.00 0.00 3.15 0.00 0.00 21 ER3a ExonRegion 0 2.85 5.53 0.00 1.29 0.00 0.00 5.42 0.00 0.00 0.00 0.00 2.37 0.00 1.82 1.39 8.08 8.89 0.00 4.25 4.34 0.00 0.00 0.00 22 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER4a ExonRegion 0 151.82 664.90 337.12 412.31 491.74 736.18 437.64 404.49 412.57 572.85 654.79 302.84 196.93 619.49 378.49 419.32 552.90 772.22 536.35 686.74 592.48 417.03 293.42 24 E4a_E5a KnownJunction 0 313.46 880.96 576.56 770.33 622.58 721.86 475.68 697.68 633.36 901.84 798.20 707.33 337.15 876.39 747.27 668.80 733.61 1037.33 1054.90 943.93 700.80 821.63 461.47 25 ER5a ExonRegion 0 181.31 750.34 527.99 697.40 509.39 810.47 460.44 649.34 588.61 854.79 792.60 412.60 320.50 736.16 521.84 523.06 770.74 804.31 802.37 928.50 675.16 572.94 375.11 26 E5a_E6a KnownJunction 0 160.77 771.97 525.38 717.59 661.97 814.36 479.25 552.73 508.01 839.52 830.63 500.26 431.30 690.04 545.40 503.54 736.04 792.88 640.87 850.74 656.51 532.67 375.68 27 ER6a ExonRegion 0 132.82 644.55 472.69 672.04 620.38 826.28 472.46 511.20 520.50 814.16 746.52 445.62 483.65 663.47 445.59 463.72 650.52 875.74 642.20 795.90 595.54 459.80 333.27 28 E6_Da KnownBoundary 0 171.88 764.67 503.29 741.40 793.46 998.18 639.70 566.25 580.93 882.74 721.60 584.29 567.01 741.84 575.07 491.15 652.27 883.12 751.46 812.39 553.77 557.90 340.68 29 ER6b ExonRegion 0 242.42 980.44 554.24 782.56 977.22 1239.98 762.44 687.06 653.46 953.92 903.35 595.92 495.47 794.02 609.26 658.01 710.81 983.17 878.48 817.51 562.22 742.14 448.26 30 E6b_E7a KnownJunction 0 376.14 1532.88 652.73 892.89 1461.72 1704.53 1051.65 838.07 719.15 999.56 928.92 958.66 604.67 805.76 836.15 831.49 804.39 914.46 1051.32 964.83 547.84 783.67 495.36 31 ER7a ExonRegion 0 305.46 1081.49 478.18 737.91 850.65 1120.92 692.33 671.73 589.90 860.35 774.28 603.76 592.65 653.19 509.98 511.50 588.06 607.56 671.79 754.58 287.02 551.87 334.89 32 E7a_E9a KnownJunction 0 259.45 1109.87 514.32 710.60 734.97 1177.33 769.05 671.89 605.32 974.74 570.62 440.69 458.74 467.66 431.05 267.88 536.23 279.35 382.88 804.46 240.01 489.19 203.68 33 ER8a ExonRegion 0 0.86 0.82 0.00 1.64 0.00 0.00 2.68 1.04 0.00 1.38 0.78 1.44 0.00 0.00 0.00 1.20 1.34 3.34 0.00 0.00 0.89 0.00 2.38 34 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E9_Ab NovelBoundary 0 177.81 475.77 158.66 196.45 323.68 545.71 341.47 179.53 169.65 320.49 243.48 200.77 204.86 255.75 161.69 134.84 243.57 66.99 182.31 357.62 160.87 181.31 135.90 36 ER9a ExonRegion 0 259.18 956.71 486.36 694.08 647.53 1084.44 662.58 628.06 565.35 911.27 619.23 499.46 519.74 574.79 463.15 307.75 517.64 358.30 394.12 744.48 264.04 444.74 234.13 37 ER9b ExonRegion 0 367.04 926.87 486.71 679.05 648.90 1101.44 649.52 599.73 562.13 894.95 672.37 659.45 616.11 662.88 511.47 427.77 558.17 478.88 523.64 779.29 373.88 453.14 366.87 38 E9_Da NovelBoundary 0 499.79 993.44 448.62 669.91 685.40 1152.75 683.46 541.81 548.87 785.90 699.91 777.40 486.98 644.30 714.88 475.26 635.72 595.27 664.96 900.66 413.78 507.38 431.08 39 E9b_E10a KnownJunction 0 498.31 875.50 577.74 882.47 973.68 1267.00 670.43 673.78 682.95 904.52 888.01 686.92 463.44 833.13 660.61 454.41 765.31 796.53 747.88 1050.03 510.03 590.35 398.82 40 ER9c ExonRegion 0 401.63 837.69 509.12 760.49 695.97 1125.26 583.91 600.01 610.57 849.30 842.21 760.05 465.61 735.45 613.36 461.91 726.20 750.95 683.21 953.41 466.27 524.26 412.35 41 E10_Ab NovelBoundary 0 282.57 505.90 556.37 770.83 598.13 704.88 476.34 555.65 522.97 699.81 472.65 424.04 269.30 462.95 413.50 349.74 502.57 700.94 560.02 706.28 397.23 405.79 225.19 42 ER10a ExonRegion 0 381.10 737.47 611.96 931.17 784.78 1108.15 573.82 692.70 720.94 941.07 829.78 645.35 423.76 767.64 602.27 477.11 755.13 942.90 756.24 996.74 542.11 590.25 367.43 43 ER10b ExonRegion 0 350.03 876.06 579.17 772.07 687.13 1067.33 583.86 618.40 595.99 838.04 763.09 607.03 454.78 828.01 650.52 542.20 693.92 1059.13 731.39 953.30 660.62 526.74 411.23 44 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E10a_E13a KnownJunction 0 382.81 1039.75 590.87 816.68 758.15 1066.32 562.32 671.15 613.16 838.15 783.20 624.65 505.32 800.70 727.49 423.31 672.56 1050.68 707.13 988.80 747.75 435.86 393.10 46 E11a_E13c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.25 0.11 0.00 0.00 0.00 0.00 48 ER12a ExonRegion 0 1.30 2.50 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 E13_Ac NovelBoundary 0 245.38 621.67 419.03 576.82 549.58 814.59 383.95 446.80 388.39 578.63 384.20 333.11 173.37 412.50 369.25 318.89 374.29 761.37 581.00 598.84 425.15 274.02 217.33 51 ER13a ExonRegion 0 304.07 891.16 531.13 717.48 647.83 949.70 463.09 596.51 562.39 784.61 718.82 613.34 442.95 771.10 675.99 418.08 668.61 1029.20 688.04 929.31 733.59 406.05 353.05 52 ER13b ExonRegion 0 318.18 915.11 552.44 730.28 682.09 1085.15 523.07 619.79 562.80 785.73 709.37 593.14 393.96 760.90 660.04 447.30 648.90 1070.31 766.08 925.35 726.12 446.39 367.57 53 ER13c ExonRegion 0 365.68 886.32 605.14 764.10 741.67 1261.34 615.12 607.69 527.83 801.00 651.56 417.25 332.25 795.10 706.32 523.36 606.61 1053.34 747.84 929.76 636.70 468.18 373.42 54 E13a_E14a KnownJunction 0 543.36 1199.65 667.69 1003.74 956.03 1444.45 687.79 683.76 612.38 860.12 752.82 330.86 348.68 881.40 791.15 583.18 661.06 1014.90 748.54 933.70 564.95 469.84 398.82 55 ER14a ExonRegion 0 443.14 1558.84 740.24 923.49 820.55 1115.40 607.05 742.29 632.39 901.13 824.49 522.52 474.25 823.01 778.09 570.40 644.19 1001.57 1005.50 983.35 577.25 468.06 423.35 56 E14_Da KnownBoundary 0 6.89 0.00 6.74 8.56 8.66 0.00 16.61 8.09 11.81 12.87 4.37 18.91 13.47 4.59 5.07 7.60 22.91 10.28 4.05 17.45 5.75 0.00 15.02 57 E14a_E15a KnownJunction 0 0.00 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 1.29 0.00 0.00 0.00 0.00 0.00 0.00 3.93 0.00 4.33 0.00 0.00 0.00 0.00 58 E14a_E17a KnownJunction 0 810.59 3136.09 736.61 971.37 1724.02 1148.49 812.86 739.09 644.55 863.45 765.61 580.84 627.56 753.61 879.78 371.27 537.73 660.77 643.59 859.88 561.68 518.04 268.81 59 E14a_E20a NovelJunction 0 6.30 0.00 8.78 1.56 20.46 0.00 0.00 0.00 3.59 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 2.36 0.00 0.00 0.00 60 ER14b ExonRegion 0 544.47 2317.63 693.30 848.79 1308.06 1149.60 734.66 672.00 616.59 855.10 733.47 595.46 536.67 729.17 729.15 400.60 592.86 679.11 629.91 827.58 526.45 432.18 316.21 61 ER14c ExonRegion 0 6.07 1.02 3.11 2.95 5.74 0.52 7.77 4.47 2.48 4.89 1.70 10.71 24.38 1.79 2.76 3.36 5.62 4.92 5.81 5.68 1.55 1.65 3.61 62 ER15a ExonRegion 0 5.27 11.38 7.72 7.07 2.00 5.02 15.98 8.65 4.58 8.03 4.33 14.90 9.23 5.43 4.67 13.31 8.94 16.44 8.20 15.34 6.28 3.11 13.52 63 I15_SR1 SilentIntronRegion 0 6.93 7.62 11.41 10.27 9.24 4.80 21.43 11.80 9.20 10.37 5.06 20.03 28.75 3.24 7.38 8.31 11.98 5.92 6.82 20.51 1.57 2.60 6.47 64 ER16a ExonRegion 0 2.39 0.87 2.63 6.89 5.18 0.08 4.08 0.79 2.07 2.01 1.18 10.50 7.48 0.12 2.31 6.97 3.70 3.73 3.60 5.42 2.46 0.07 4.25 65 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 8.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 1.78 0.00 0.00 0.00 0.00 0.00 66 ER17a ExonRegion 0 773.59 2939.76 847.88 1078.62 1058.68 904.55 600.15 881.97 663.28 908.81 798.38 683.99 664.81 696.80 789.10 542.09 599.01 833.05 1027.83 911.63 525.03 587.85 418.84 67 E17_Da KnownBoundary 0 3.19 6.71 1.77 7.46 6.62 0.00 7.60 10.39 4.43 11.39 7.11 19.96 12.50 4.89 4.45 11.36 4.68 5.14 23.15 10.55 2.90 0.00 0.00 68 E17a_E19a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 69 E17a_E20a KnownJunction 0 639.45 2541.59 1089.32 1277.86 738.79 959.28 621.10 1057.45 746.64 991.58 557.56 681.07 346.57 760.14 1022.32 677.51 479.01 877.20 1584.99 954.79 369.61 770.38 527.20 70 ER17b ExonRegion 0 6.22 6.57 0.70 6.52 10.64 0.09 8.01 7.19 3.68 5.36 1.70 16.31 9.78 4.08 5.24 7.79 4.87 2.57 6.91 7.29 7.74 1.25 1.90 71 E17b_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.42 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72 ER18a ExonRegion 0 6.68 6.42 0.96 0.00 0.00 0.00 6.25 4.03 4.81 6.87 3.03 20.44 12.62 8.57 5.83 7.81 10.41 4.36 8.37 8.91 6.95 2.23 1.48 73 ER18b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.00 1.15 0.00 0.00 0.00 0.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74 I18_SR6 SilentIntronRegion 0 41.13 19.06 8.30 16.24 21.04 4.80 21.72 7.81 6.60 8.25 0.80 19.97 24.11 3.27 11.31 20.89 10.01 11.92 14.05 12.90 4.56 1.72 8.10 75 ER19a ExonRegion 0 14.92 25.71 3.08 8.76 8.64 0.58 14.37 10.27 8.06 10.11 1.38 18.05 14.12 0.58 6.92 14.18 5.92 5.82 1.32 9.33 1.11 5.12 4.86 76 E19_Da KnownBoundary 0 12.67 17.89 3.25 15.35 12.99 2.84 25.31 13.23 14.24 8.62 2.68 24.31 19.80 0.00 0.00 4.36 15.99 5.89 3.76 11.51 0.00 6.12 11.44 77 ER19b ExonRegion 0 9.22 12.27 1.97 7.74 3.72 0.59 7.41 4.69 5.19 3.19 0.98 14.46 15.42 0.00 1.77 1.26 4.14 1.60 0.49 2.42 1.90 2.05 4.38 78 ER20a ExonRegion 0 631.19 2123.27 934.67 1176.27 1273.16 1228.07 747.69 987.97 711.12 950.46 583.56 760.01 494.65 674.83 892.95 519.82 493.36 540.48 808.62 933.87 416.03 671.51 326.58 79 E20a_E21a KnownJunction 0 474.23 2880.47 784.21 1162.29 1275.55 1018.79 769.84 987.30 664.06 938.29 465.01 655.71 394.13 450.18 705.36 385.80 324.36 277.32 414.04 872.53 196.95 628.38 145.89 80 ER21a ExonRegion 0 342.17 2461.99 706.63 1028.07 1136.30 893.67 652.71 912.05 638.97 922.88 492.89 731.68 383.02 446.09 676.96 394.30 297.08 309.81 419.41 807.80 203.48 621.58 155.64 81 ER21b ExonRegion 1 427.64 2384.48 732.31 1027.54 831.22 582.39 406.49 901.18 643.93 921.60 493.76 792.19 443.10 387.89 715.96 292.21 289.67 217.46 354.28 660.82 143.63 551.16 165.99 82 E21_Db KnownBoundary 1 558.10 1685.69 690.51 1035.63 415.54 487.28 292.40 778.52 619.00 769.06 308.50 582.94 332.61 351.76 779.78 248.05 187.38 122.74 324.43 628.75 80.62 730.88 109.69 83 ER21c ExonRegion 1 464.51 983.03 421.81 599.74 555.55 502.36 273.47 456.07 380.71 459.65 245.48 406.14 270.49 175.71 348.51 122.38 179.75 105.16 200.18 378.59 67.70 379.06 83.28 84 E21_Dc KnownBoundary 1 172.25 411.97 191.36 276.59 245.25 266.55 128.69 204.22 151.47 209.20 100.66 200.17 91.88 61.04 82.95 39.05 92.10 104.96 145.89 206.71 41.21 81.44 41.74 85 ER21d ExonRegion 0 47.20 143.94 95.13 142.51 116.50 153.79 66.90 113.69 74.72 106.21 23.91 32.70 17.86 18.30 22.60 15.82 29.32 43.32 58.27 75.82 19.57 26.09 20.99 86 IG46_SR1 SilentIntergenicRegion 0 4.36 16.24 5.17 10.72 9.65 9.91 11.42 9.45 7.47 2.97 0.00 2.92 2.29 1.77 1.71 3.64 2.13 3.14 6.15 8.90 0.28 1.74 1.70