Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SCO2 Gene 0 58.85 44.50 132.20 90.87 30.88 95.93 47.63 142.95 106.90 134.43 138.78 19.47 13.57 148.52 207.72 95.00 86.22 151.91 40.34 81.24 75.79 49.50 39.73 2 423348 Transcript 0 4.34 0.00 2.27 0.00 0.35 0.48 0.00 2.22 0.24 0.94 4.77 7.27 0.00 8.38 9.46 8.53 9.03 2.22 0.00 1.75 3.84 0.27 2.50 3 439934 Transcript 0 2.65 0.36 0.00 0.00 0.47 0.00 0.23 0.01 0.03 0.00 6.11 0.00 0.00 3.77 13.25 0.52 13.50 1.45 0.00 0.37 0.00 0.34 0.00 4 395693 Transcript 0 10.99 4.82 16.12 8.91 7.70 23.25 8.43 17.75 12.09 14.49 19.01 6.12 10.73 34.80 56.41 13.99 11.18 17.07 9.72 9.27 14.46 5.98 7.09 5 252785 Transcript 0 1.38 0.10 0.14 0.75 0.80 0.49 0.20 1.47 0.51 0.52 0.55 0.00 0.00 1.11 1.40 0.20 0.00 0.25 0.11 0.11 0.00 0.21 0.64 6 ER1a ExonRegion 0 1.35 0.00 1.02 0.00 0.70 0.96 0.00 0.37 0.48 0.21 2.32 1.94 0.00 4.92 4.22 2.10 5.16 0.38 0.00 0.24 1.68 0.55 1.67 7 E1a_E4a KnownJunction 0 7.33 0.00 3.52 0.00 0.00 0.00 0.00 4.07 0.00 1.67 7.21 12.60 0.00 11.83 14.71 14.95 12.90 4.06 0.00 3.26 5.99 0.00 3.33 8 ER2a ExonRegion 0 1.74 0.72 0.01 0.01 0.94 0.00 0.47 0.01 0.05 0.01 5.17 0.00 0.00 2.77 5.12 1.05 3.53 2.91 0.00 0.75 0.00 0.69 0.00 9 E2a_E4a KnownJunction 0 3.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.05 0.00 0.00 4.77 21.39 0.00 23.47 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.96 11 ER3b ExonRegion 0 21.87 7.95 19.36 4.43 9.87 49.07 5.72 12.19 7.61 11.96 53.10 2.07 4.97 52.81 86.55 48.61 27.28 7.75 10.21 13.35 29.28 19.67 28.50 12 E3a_E4a KnownJunction 0 3.26 0.00 22.12 8.96 4.07 11.13 0.00 12.45 7.03 7.76 17.27 11.55 19.80 27.14 26.45 12.48 4.77 8.25 9.60 0.00 5.44 5.14 8.19 13 E3b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER3c ExonRegion 0 2.75 0.20 0.29 1.50 1.61 0.98 0.40 2.94 1.03 1.03 1.10 0.00 0.00 2.22 2.80 0.40 0.00 0.49 0.21 0.21 0.00 0.42 1.27 15 I3 Intron 0 33.58 5.78 18.23 17.84 15.56 13.79 8.79 38.26 21.64 20.30 20.28 4.65 4.11 28.19 26.11 15.97 11.47 25.31 7.65 13.98 8.77 15.01 17.07 16 I3_AR1 ActiveIntronRegion 0 15.34 0.95 4.56 3.51 6.87 4.33 3.64 13.48 8.80 4.64 14.82 0.99 0.90 21.92 12.59 6.84 10.02 6.49 1.12 2.74 8.50 6.52 13.10 17 I3_SR1 SilentIntronRegion 0 42.26 2.02 8.07 17.71 13.15 5.56 6.11 46.12 17.25 15.75 21.11 6.65 6.70 23.29 31.84 18.19 10.02 13.35 6.63 12.83 6.38 18.21 17.62 18 I3_AR2 ActiveIntronRegion 0 75.44 26.20 75.29 61.40 45.60 55.14 28.51 101.13 67.30 74.72 35.69 12.63 9.83 54.97 58.29 40.17 18.23 100.71 28.98 49.77 13.40 35.81 28.41 19 Ix Intron 0 41.68 15.40 35.96 31.79 40.53 55.56 26.07 63.73 40.89 56.10 26.35 3.99 3.90 46.31 63.77 33.02 30.00 68.18 45.04 59.09 17.80 25.25 11.86 20 Ix_AR1 ActiveIntronRegion 0 42.52 15.69 36.66 32.42 41.35 56.61 26.59 64.95 41.67 57.16 26.88 4.07 3.98 47.17 65.06 33.62 30.57 69.49 45.85 60.26 18.14 25.74 12.10 21 E4_Aa NovelBoundary 0 139.95 49.73 177.52 147.53 86.42 193.47 63.11 300.79 165.13 242.46 63.70 6.30 6.82 70.22 92.34 81.26 52.08 242.21 68.61 113.20 34.35 44.58 29.19 22 ER4a ExonRegion 0 112.55 71.82 203.73 132.28 57.10 152.64 78.40 205.80 151.51 197.41 206.28 27.11 19.37 238.14 280.91 147.96 133.86 236.18 64.05 108.32 114.50 66.24 58.80 23 E4_Da KnownBoundary 0 158.47 92.88 387.95 277.12 55.26 252.41 99.98 339.56 258.56 262.07 292.13 56.42 32.63 332.57 537.74 176.28 159.61 425.68 87.44 226.59 190.58 108.51 117.12 24 ER4b ExonRegion 0 69.39 70.49 222.29 164.01 38.71 142.13 74.19 257.60 195.69 238.43 227.27 34.94 22.85 223.77 361.61 145.06 134.97 256.44 63.83 152.83 121.84 89.12 60.98 25 ER4c ExonRegion 0 29.71 14.45 26.26 17.77 19.02 56.78 25.30 40.80 29.25 35.72 39.76 6.80 12.40 77.26 142.78 29.51 28.76 42.96 19.57 27.81 37.94 12.80 11.12