Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PNPLA3 Gene 0 4.34 4.85 6.83 10.32 6.42 7.47 6.19 7.80 5.69 10.71 0.79 2.62 5.74 2.57 3.39 2.35 9.85 41.39 12.31 20.69 42.00 17.19 34.10 2 216180 Transcript 0 4.46 6.41 3.32 5.08 7.51 7.12 8.29 4.67 2.97 7.02 1.62 5.57 7.40 5.12 7.21 4.99 7.70 18.97 11.88 11.62 19.81 9.92 20.98 3 406117 Transcript 0 0.00 0.00 0.52 0.28 0.00 0.00 0.00 0.00 0.00 0.41 0.16 0.00 0.00 0.00 0.00 0.00 0.00 1.17 0.00 0.59 0.59 0.00 0.87 4 423180 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 0.00 0.00 3.59 5 478713 Transcript 0 0.00 0.23 0.21 0.00 0.00 0.00 0.00 0.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.80 0.00 1.23 1.78 0.48 1.35 6 497129 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.34 0.02 0.00 0.00 6.02 3.72 7.67 7 IG19_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.00 6.87 2.28 0.00 0.00 7.80 10.93 17.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 0.00 0.00 0.00 0.00 8 ER1a ExonRegion 0 0.00 0.72 0.00 0.00 0.00 0.00 0.00 1.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.31 1.16 2.12 0.00 0.94 0.58 2.50 9 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 4.42 0.00 0.00 0.00 8.71 10 E1_Ac KnownBoundary 0 0.00 3.35 0.00 0.00 0.00 2.61 0.00 0.00 0.00 1.16 0.00 0.00 0.00 0.00 0.00 0.00 9.07 5.64 3.67 0.00 6.05 3.12 3.50 11 ER1b ExonRegion 0 0.00 2.03 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.20 6.55 5.79 0.00 6.41 2.08 9.34 12 ER1c ExonRegion 0 1.14 0.52 1.42 0.87 0.00 1.86 0.24 2.44 1.33 3.08 0.00 0.00 0.00 0.00 0.00 0.00 1.56 15.02 6.33 3.15 13.67 2.70 9.73 13 E1_Da NovelBoundary 0 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.49 0.00 2.68 7.35 7.72 4.35 14 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 0.00 0.00 3.59 15 E1b_E3a KnownJunction 0 0.00 0.00 1.12 2.06 3.65 5.68 0.00 0.00 0.00 7.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.88 4.61 2.49 12.05 2.94 4.27 16 E1b_E3b KnownJunction 0 0.00 0.00 1.83 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 2.94 2.97 0.00 4.35 17 ER1d ExonRegion 0 0.00 0.00 2.76 2.61 2.68 3.67 0.11 0.00 0.00 5.73 0.00 0.00 0.00 0.00 0.00 0.00 0.55 32.03 4.25 5.50 18.73 5.90 7.59 18 ER2a ExonRegion 0 0.00 0.47 0.42 0.00 0.00 0.00 0.00 1.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.60 0.00 2.45 3.56 0.96 2.70 19 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 I2 Intron 0 0.17 0.05 1.57 0.85 0.14 0.14 0.41 0.67 0.43 0.71 0.00 0.00 0.50 0.07 0.00 0.08 1.29 8.99 2.66 4.61 12.59 3.26 10.42 21 I2_SR1 SilentIntronRegion 0 0.17 0.05 1.57 0.85 0.14 0.14 0.41 0.67 0.43 0.71 0.00 0.00 0.50 0.07 0.00 0.08 1.29 8.99 2.66 4.61 12.60 3.26 10.43 22 ER3a ExonRegion 0 0.00 0.00 2.65 2.95 2.68 3.67 2.65 0.29 1.24 7.07 0.00 0.00 0.00 0.00 0.00 0.00 3.30 32.64 6.37 3.90 23.14 4.17 16.15 23 ER3b ExonRegion 0 1.04 3.12 9.56 9.90 4.13 6.13 2.00 11.23 5.94 13.71 0.00 0.00 5.39 0.00 0.00 0.00 13.58 57.83 19.28 27.37 59.44 22.93 45.23 24 E3a_E4a KnownJunction 0 10.52 2.63 7.86 19.21 3.31 8.01 0.00 18.98 6.74 19.23 0.00 0.00 0.00 0.00 0.00 0.00 4.58 76.44 29.46 37.39 59.00 26.27 38.07 25 ER4a ExonRegion 0 2.95 1.57 5.38 9.75 3.61 2.86 0.00 11.73 8.29 14.23 0.00 0.00 7.46 0.00 0.00 0.00 6.75 59.94 18.20 27.40 50.28 17.68 46.36 26 E4a_E5a KnownJunction 0 0.00 2.70 4.64 4.93 8.15 0.00 0.00 10.39 12.62 10.83 0.00 0.00 5.84 0.00 0.00 0.00 16.55 57.54 0.00 36.69 68.02 12.06 35.94 27 E5_Aa NovelBoundary 0 3.33 0.00 1.33 4.63 4.33 0.00 0.00 2.51 0.00 5.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 20.81 9.60 2.75 8.15 8.02 28.26 28 ER5a ExonRegion 0 1.81 0.94 7.99 9.78 8.27 11.09 5.88 13.14 13.16 15.64 0.00 0.00 2.06 0.00 0.00 0.00 15.77 84.56 17.25 34.22 70.87 25.08 55.80 29 E5_Ab KnownBoundary 0 2.89 0.00 3.55 7.99 3.40 9.82 4.11 4.31 7.03 12.52 0.00 0.00 0.00 0.00 0.00 0.00 24.59 97.00 24.00 35.73 92.05 28.47 28.26 30 ER5b ExonRegion 0 1.43 3.41 7.77 8.23 3.88 11.32 4.87 9.07 10.85 13.16 0.00 0.00 2.46 0.00 0.00 0.00 12.38 83.52 11.11 29.31 75.09 22.03 51.35 31 E5_Da NovelBoundary 0 0.00 2.50 0.00 7.03 0.00 0.00 0.00 3.94 1.79 1.64 0.00 0.00 5.68 0.00 0.00 0.00 0.00 6.63 0.00 0.00 17.24 5.39 12.12 32 E5a_E6a KnownJunction 0 0.00 3.29 11.38 6.89 0.00 26.52 6.09 14.38 8.39 14.99 0.00 0.00 0.00 0.00 0.00 0.00 8.98 55.01 4.80 23.46 45.84 22.90 21.34 33 I5 Intron 0 0.33 0.16 0.70 3.59 0.41 0.28 0.92 0.79 0.85 0.66 0.00 0.33 1.61 0.00 0.00 0.00 5.07 8.82 0.49 3.92 14.05 6.08 15.34 34 I5_SR1 SilentIntronRegion 0 0.33 0.16 0.70 3.60 0.41 0.28 0.92 0.79 0.85 0.66 0.00 0.33 1.62 0.00 0.00 0.00 5.09 8.84 0.49 3.93 14.08 6.10 15.38 35 E6_Aa NovelBoundary 0 5.85 0.00 0.00 4.13 0.00 0.00 0.00 0.00 0.00 2.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.32 0.00 9.33 35.83 2.88 10.84 36 ER6a ExonRegion 0 5.72 0.63 7.91 9.96 8.42 14.46 2.15 6.55 6.88 10.72 0.00 0.00 0.00 0.00 0.00 0.00 14.66 61.88 4.60 18.77 54.01 21.55 28.11 37 E6_Da NovelBoundary 0 0.00 2.57 0.00 8.39 0.00 0.00 7.07 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 4.80 2.62 17.36 0.00 0.00 38 E6a_E7a KnownJunction 0 3.78 0.00 4.85 18.38 12.14 18.46 0.00 3.74 2.69 10.48 0.00 0.00 0.00 0.00 0.00 0.00 21.60 52.89 0.00 11.19 44.29 19.41 37.90 39 I6 Intron 0 0.83 0.22 1.05 2.25 0.19 0.59 0.76 0.65 0.59 1.16 0.00 0.00 1.30 0.00 0.00 0.00 3.19 7.99 1.48 2.97 14.58 5.89 11.88 40 I6_AR1 ActiveIntronRegion 0 0.60 0.67 0.00 1.27 0.09 1.10 1.71 0.00 0.23 0.61 0.00 0.00 3.50 0.00 0.00 0.00 1.45 4.41 1.58 3.53 10.69 6.18 9.78 41 I6_SR2 SilentIntronRegion 0 1.09 0.00 1.68 1.76 0.34 0.18 0.58 0.91 0.68 1.56 0.00 0.00 1.08 0.00 0.00 0.00 4.54 10.35 1.13 2.40 15.42 5.48 12.89 42 I6_AR2 ActiveIntronRegion 0 0.70 0.34 0.91 5.06 0.00 1.22 0.22 0.86 0.92 1.14 0.00 0.00 0.00 0.00 0.00 0.00 1.10 8.10 2.12 3.53 19.03 7.27 13.66 43 E7_Aa NovelBoundary 0 0.00 0.00 0.00 1.90 0.00 0.00 2.25 4.89 0.00 2.53 0.00 0.00 0.00 0.00 0.00 0.00 4.77 9.95 0.00 3.20 29.59 8.63 7.77 44 ER7a ExonRegion 0 4.52 2.07 8.04 12.42 6.77 11.66 3.25 7.36 9.19 17.50 0.00 0.00 0.89 0.00 0.00 0.00 12.94 65.46 5.90 33.06 62.57 24.02 38.80 45 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 3.12 4.35 46 E7a_E9a KnownJunction 0 0.00 3.35 9.08 11.69 3.31 29.98 4.02 11.30 4.54 5.83 0.00 0.00 0.00 0.00 0.00 0.00 4.77 56.46 13.46 40.08 51.65 18.43 49.08 47 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.67 0.03 0.00 0.00 5.74 4.31 10.99 48 ER9a ExonRegion 0 5.62 0.96 9.48 14.60 11.43 11.73 5.20 9.63 5.49 14.98 0.00 0.00 5.92 0.00 0.00 0.00 10.80 90.79 18.23 34.23 67.22 23.64 54.38 49 E9_Da NovelBoundary 0 0.00 0.00 6.18 1.70 0.00 0.00 0.00 5.96 1.27 1.13 0.00 0.00 0.00 0.00 0.00 0.00 4.39 16.50 7.53 2.94 21.75 17.27 20.40 50 E9a_E10a KnownJunction 0 3.33 3.16 5.20 8.26 22.75 23.45 5.87 4.56 3.01 8.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51.61 9.60 48.77 55.66 19.96 26.12 51 I9 Intron 0 0.79 0.16 1.80 2.16 1.71 1.27 1.16 1.71 0.73 2.54 0.05 0.00 1.28 0.07 0.00 0.00 2.54 5.59 1.02 3.96 9.36 5.81 9.52 52 I9_SR1 SilentIntronRegion 0 0.79 0.16 1.80 2.16 1.71 1.27 1.16 1.71 0.73 2.55 0.05 0.00 1.28 0.07 0.00 0.00 2.55 5.60 1.02 3.96 9.38 5.82 9.53 53 E10_Aa NovelBoundary 0 0.00 0.00 1.83 3.40 8.23 8.40 1.81 3.94 0.00 2.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.94 21.55 5.94 17.61 16.84 44.90 54 ER10a ExonRegion 0 4.37 1.32 11.41 15.47 5.07 7.20 2.31 7.98 6.39 14.55 0.11 0.00 3.75 1.30 0.00 0.00 8.83 54.71 8.31 19.23 59.00 21.85 35.13 55 E10_Da NovelBoundary 0 0.00 0.00 2.25 1.43 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 3.74 14.72 0.00 6.46 5.07 2.39 0.00 56 E10a_E11a KnownJunction 0 6.82 0.00 15.26 12.09 3.23 5.79 2.25 4.27 3.79 11.71 0.00 0.00 0.00 0.00 0.00 0.00 4.77 37.56 11.58 2.94 33.05 22.96 30.99 57 E10a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 E11_Aa NovelBoundary 0 0.00 3.35 1.45 8.26 0.00 7.50 0.00 2.55 0.00 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.27 0.00 8.76 5.00 0.00 19.72 59 ER11a ExonRegion 0 3.95 4.41 8.86 16.10 4.97 6.47 4.15 8.69 5.69 12.77 0.00 0.00 4.12 0.43 0.00 0.00 7.59 45.00 10.45 20.98 46.65 19.16 34.55 60 E11_Da KnownBoundary 0 6.89 2.83 1.83 12.29 0.00 0.00 16.83 9.98 3.94 14.61 0.00 0.00 0.00 0.00 0.00 0.00 8.23 9.66 4.42 23.52 14.33 19.78 18.44 61 ER11b ExonRegion 0 13.39 18.51 8.83 13.17 18.89 15.68 24.88 12.57 8.91 13.39 4.87 16.70 22.19 15.36 21.64 14.97 22.79 31.88 28.91 32.38 46.45 26.25 56.18 62 E11_Db NovelBoundary 0 129.21 96.89 230.21 242.13 97.37 157.41 233.62 230.51 278.50 285.62 84.65 48.02 77.92 56.63 43.88 199.86 155.40 528.90 122.17 221.73 93.53 59.52 143.84 63 Ix Intron 0 2.51 4.73 8.64 13.98 9.21 10.91 4.05 5.84 4.15 8.24 2.06 2.61 3.32 1.96 2.11 1.06 2.45 15.68 5.67 8.61 12.71 8.90 17.46 64 Ix_SR1 SilentIntronRegion 0 2.46 2.68 7.09 13.73 10.45 12.92 4.21 5.94 4.20 7.61 0.08 0.00 3.46 0.00 0.04 0.00 2.97 20.62 5.73 10.37 18.09 12.89 25.13 65 ER12a ExonRegion 0 0.00 0.00 0.78 0.00 0.00 0.00 0.00 0.00 0.00 0.40 0.78 0.00 0.00 0.00 0.00 0.00 0.00 1.07 0.00 0.00 0.00 0.00 0.00 66 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67 ER13a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00