Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PANX2 Gene 0 0.90 4.98 40.23 28.42 6.91 36.03 6.99 43.79 40.76 38.58 1.49 5.23 1.06 1.30 2.02 0.49 1.30 10.40 3.30 13.71 2.43 5.58 4.59 2 401643 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 159647 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 395842 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 402472 Transcript 0 0.00 0.00 30.96 8.10 2.22 1.34 0.00 41.36 41.55 22.10 2.50 1.33 0.00 1.03 0.00 0.00 0.00 2.67 8.58 6.85 0.00 1.45 0.00 6 395838 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 IG39_AR1 ActiveIntergenicRegion 0 0.59 6.56 5.88 12.81 6.37 18.50 0.74 7.58 6.96 7.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.80 0.45 5.66 0.31 0.29 0.41 8 IG39_SR2 SilentIntergenicRegion 0 0.29 4.20 4.78 9.78 5.71 25.12 2.28 8.33 9.50 8.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.03 1.97 6.00 1.97 0.43 1.21 9 ER1a ExonRegion 0 0.00 1.64 8.38 1.01 0.09 8.16 2.82 2.23 5.62 2.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.75 0.00 1.95 0.00 10 ER1b ExonRegion 0 1.11 3.99 34.12 14.50 2.79 24.54 5.24 38.55 49.29 30.19 2.57 0.09 0.07 1.14 0.54 2.15 1.20 7.37 6.96 12.48 0.23 5.02 3.63 11 E1a_E2a KnownJunction 0 0.00 0.00 51.71 14.18 3.57 2.73 0.00 53.81 54.80 19.13 2.68 0.00 0.00 0.00 0.00 0.00 0.00 6.43 12.61 15.72 0.00 3.12 0.00 12 E1a_E3a KnownJunction 0 0.00 3.09 20.49 21.98 3.57 2.90 2.03 49.17 26.45 35.14 7.69 0.00 0.00 2.47 0.00 3.67 4.77 22.26 22.68 11.19 3.15 8.39 4.01 13 I1_AR1 ActiveIntronRegion 0 0.60 3.53 11.90 18.10 1.52 11.38 3.13 8.78 4.52 10.81 0.00 0.00 0.14 0.90 1.88 0.40 1.33 4.03 0.43 6.01 1.78 1.69 1.88 14 E2_Aa NovelBoundary 0 0.00 6.25 6.15 18.88 3.99 7.33 9.98 17.79 18.26 11.07 0.00 0.00 0.00 0.00 0.00 4.19 4.02 0.00 0.00 6.52 0.00 0.00 0.00 15 ER2a ExonRegion 0 0.00 0.00 27.61 7.24 3.10 1.29 0.00 38.64 38.70 19.12 2.24 3.99 0.00 0.61 0.00 0.00 0.00 1.59 8.62 4.84 0.00 1.23 0.00 16 E2_Da NovelBoundary 0 0.00 5.59 28.41 28.67 15.20 23.45 5.48 25.88 14.03 20.09 0.00 5.25 0.00 0.00 0.00 0.00 0.00 4.73 12.33 14.96 0.00 0.00 4.35 17 E2a_E3a KnownJunction 0 0.00 0.00 13.57 2.86 0.00 0.00 0.00 31.63 31.13 28.07 2.58 0.00 0.00 2.47 0.00 0.00 0.00 0.00 4.52 0.00 0.00 0.00 0.00 18 E3_Aa NovelBoundary 0 0.00 3.09 10.17 6.03 0.00 29.24 2.25 2.26 4.14 8.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 0 0.58 6.59 47.16 28.79 7.41 41.73 9.42 57.88 48.79 49.11 1.92 6.90 2.02 1.20 1.16 0.73 1.15 11.60 3.60 15.49 2.64 7.16 5.55 20 E3_Ab KnownBoundary 0 3.56 12.63 89.59 78.05 15.53 96.48 35.51 105.15 94.85 94.66 9.16 0.00 0.00 2.47 4.45 0.00 0.00 28.56 0.00 31.83 2.66 11.08 12.21 21 ER3b ExonRegion 0 0.47 4.64 45.65 29.24 3.83 39.55 6.44 53.83 48.53 49.43 1.22 7.34 2.06 2.00 1.75 0.00 1.87 15.51 1.80 15.06 2.03 5.46 3.96 22 E3_Da KnownBoundary 0 0.00 0.00 7.86 0.00 3.57 11.19 0.00 1.52 0.00 8.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 0.00 2.33 0.00 23 E3a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER3c ExonRegion 0 0.00 0.00 1.80 0.14 0.11 3.38 0.13 0.40 0.46 1.25 0.00 0.00 0.20 0.97 0.12 0.00 0.00 0.24 1.18 1.55 0.00 5.24 2.14 25 E3_Ac KnownBoundary 0 0.00 0.00 2.96 0.00 0.00 10.45 0.00 0.00 1.19 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.77 8.09 0.00 0.00 0.00 0.00 26 ER3d ExonRegion 0 0.60 0.05 15.41 7.97 2.10 19.84 0.82 19.13 15.31 15.89 0.50 1.01 0.00 0.58 0.00 0.00 0.00 2.68 3.20 6.04 1.26 2.94 0.34 27 E3b_E4a KnownJunction 0 0.00 0.00 33.12 21.14 7.47 9.60 3.93 42.27 39.99 33.07 0.00 0.00 0.00 2.24 0.00 0.00 0.00 16.37 8.19 15.60 0.00 0.00 7.68 28 ER4a ExonRegion 0 0.53 4.44 37.02 15.30 5.87 25.86 3.76 34.89 30.22 27.61 1.01 0.00 0.00 0.40 1.25 0.00 0.00 8.42 4.18 13.63 4.95 3.28 4.14 29 E4_Da KnownBoundary 0 0.00 6.18 40.06 26.24 12.48 44.69 10.47 36.93 30.27 24.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 4.52 17.96 6.30 5.39 0.00 30 E4a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.33 3.24 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 0.00 0.00 0.00 31 ER4b ExonRegion 0 0.64 4.04 34.35 23.07 6.28 25.52 4.71 30.59 32.27 27.22 1.53 0.00 0.00 0.08 3.07 0.00 3.57 6.10 1.41 14.97 3.31 3.22 3.62 32 E4_Ab KnownBoundary 0 3.78 0.00 63.33 36.33 15.37 42.82 6.23 48.75 49.31 54.56 4.63 0.00 0.00 2.18 9.77 0.00 3.83 8.83 0.00 28.57 8.71 9.25 8.71 33 ER4c ExonRegion 0 3.74 2.61 57.91 31.91 12.49 39.87 11.98 41.48 46.59 50.79 1.69 3.77 0.00 2.42 3.50 0.00 0.76 12.79 0.00 22.20 12.32 6.95 9.11 34 E4_Db KnownBoundary 0 7.19 2.57 55.59 33.30 12.05 48.55 15.24 34.38 46.01 42.09 0.00 11.70 0.00 4.77 0.00 0.00 0.00 16.75 0.00 11.63 7.85 5.76 7.68 35 ER4d ExonRegion 0 1.61 6.65 53.89 39.23 6.40 37.35 7.98 45.68 36.83 39.50 0.97 2.83 0.00 1.30 3.52 0.45 1.99 10.51 0.99 10.17 1.75 4.83 4.91 36 E4_Dc KnownBoundary 0 6.74 2.89 59.28 70.45 3.31 67.80 12.41 57.54 37.96 47.52 2.26 0.00 0.00 0.00 4.45 0.00 0.00 5.18 0.00 7.54 0.00 5.82 7.34 37 ER4e ExonRegion 0 1.42 5.87 37.81 41.36 12.82 45.77 9.00 40.34 42.75 38.56 1.80 8.81 1.14 1.56 3.72 0.66 1.46 11.23 4.43 16.90 2.91 6.78 6.14 38 ER4f ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00