Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C22orf27 Gene 0 23.50 25.76 26.38 48.28 41.11 35.22 17.96 36.47 34.11 23.71 8.01 3.98 11.02 9.71 33.25 10.34 10.47 42.52 15.64 29.76 11.58 12.23 12.85 2 432624 Transcript 0 4.84 10.17 0.71 0.95 25.81 14.51 11.38 2.38 0.12 1.24 2.53 1.75 2.18 6.48 13.80 3.89 5.35 4.09 2.07 5.03 1.45 2.84 3.44 3 422995 Transcript 0 0.81 1.56 1.75 3.89 1.80 2.10 0.76 3.20 3.95 1.48 0.56 0.34 1.02 0.13 1.77 1.42 0.95 6.32 2.33 3.85 0.42 0.00 1.97 4 441558 Transcript 0 0.90 0.11 1.16 0.44 0.72 0.99 0.91 0.69 0.59 1.00 0.21 0.00 1.96 0.48 0.77 0.79 0.18 2.17 0.85 1.47 1.28 1.01 1.57 5 ER1a ExonRegion 0 0.00 2.03 0.00 1.43 0.00 0.43 0.03 0.23 0.00 1.81 0.00 0.00 0.00 0.00 4.35 0.00 0.00 8.66 0.00 3.36 0.00 0.00 0.00 6 E1_Ab KnownBoundary 0 0.00 2.89 2.48 12.55 0.00 2.16 0.00 0.00 7.47 4.78 0.00 0.00 0.00 0.00 9.89 0.00 0.00 31.42 0.00 8.95 0.00 0.00 0.00 7 ER1b ExonRegion 0 2.01 1.25 4.85 9.75 6.33 15.96 7.52 6.32 6.48 3.99 2.25 0.00 0.00 0.00 6.95 4.54 3.24 19.49 1.56 7.08 2.12 0.00 1.44 8 E1_Ac KnownBoundary 0 0.00 0.00 9.37 14.18 0.00 2.10 3.67 6.61 14.67 3.92 2.42 0.00 0.00 0.00 9.64 0.00 0.00 27.73 0.00 0.00 0.00 0.00 0.00 9 ER1c ExonRegion 0 1.76 0.00 2.41 7.39 0.36 1.53 0.64 5.03 5.75 1.91 2.58 0.00 0.36 0.17 5.54 2.03 1.95 14.39 1.35 5.19 1.80 0.00 0.00 10 E1_Da NovelBoundary 0 3.63 14.08 6.48 13.72 22.84 11.30 6.76 7.15 17.85 7.47 0.00 0.00 0.00 2.47 0.00 3.59 0.00 44.98 0.00 15.79 2.78 0.00 3.93 11 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.42 0.00 0.00 0.00 0.00 0.00 0.00 17.06 0.00 8.98 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 Ix_AR1 ActiveIntronRegion 0 1.40 1.79 5.22 8.03 2.35 1.21 2.04 6.79 10.12 4.88 0.42 0.00 0.00 0.29 2.25 1.31 0.00 22.83 5.60 8.89 0.96 0.46 1.94 15 E2_Aa NovelBoundary 0 7.04 3.35 6.62 22.61 7.72 2.56 8.48 20.04 12.09 10.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.85 0.00 20.26 3.15 5.51 3.84 16 ER2a ExonRegion 0 2.44 4.69 5.26 11.67 5.40 3.41 2.29 9.60 10.63 4.43 1.67 1.03 3.05 0.39 5.31 4.27 2.85 18.96 6.98 11.56 1.27 0.00 5.92 17 E2_Da NovelBoundary 0 9.85 11.64 3.84 13.02 3.90 8.01 6.40 20.50 8.45 12.60 0.00 0.00 0.00 0.00 0.00 4.36 12.44 23.75 4.24 19.69 3.03 0.00 0.00 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 1.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E3_Aa NovelBoundary 0 3.78 7.76 3.67 17.65 19.35 0.00 7.51 20.41 18.63 8.60 0.00 0.00 6.82 0.00 21.01 0.00 0.00 33.33 4.80 16.87 6.12 0.00 8.37 20 ER3a ExonRegion 0 32.70 35.49 37.40 68.43 54.68 47.51 23.28 51.33 48.03 33.38 10.82 5.42 14.66 12.88 46.07 13.48 14.31 57.42 21.38 40.60 15.85 17.02 17.08 21 E3_Da KnownBoundary 0 0.00 3.29 1.45 7.06 0.00 9.37 3.89 7.68 2.66 1.10 0.00 0.00 6.82 0.00 4.45 0.00 7.57 0.00 0.00 4.79 0.00 2.82 3.33 22 ER3b ExonRegion 0 14.53 28.47 2.13 1.42 77.42 43.09 34.09 4.50 0.36 1.90 7.58 5.25 6.54 19.44 19.97 11.66 7.08 3.62 6.22 11.74 4.34 8.51 10.31 23 E3_Db NovelBoundary 0 131.50 78.01 99.20 121.26 78.52 83.76 19.12 120.39 54.22 77.28 26.27 7.50 6.82 23.96 53.40 7.60 4.21 53.77 15.72 18.98 40.90 19.41 27.91 24 Ix_SR1 SilentIntronRegion 0 10.02 6.16 9.68 24.35 11.64 6.50 9.99 10.05 8.67 9.81 0.67 0.39 2.31 2.96 7.54 1.64 4.73 21.38 3.86 10.25 4.81 5.49 4.08 25 E4_Aa NovelBoundary 0 0.00 7.89 4.97 10.52 0.00 7.15 25.48 11.30 3.50 4.24 7.79 6.00 6.01 0.00 5.69 0.00 0.00 0.00 7.44 10.48 0.00 2.57 7.51 26 ER4a ExonRegion 0 0.00 0.00 1.80 0.05 2.29 3.19 1.11 0.00 0.00 0.74 0.00 0.00 3.43 1.05 1.76 2.52 0.00 2.07 1.37 3.63 1.83 1.84 5.03 27 E4_Da NovelBoundary 0 160.84 184.57 111.26 105.35 167.15 140.83 190.21 90.73 133.77 69.36 68.91 25.96 39.77 40.85 72.56 102.28 118.84 121.21 142.40 197.06 96.43 54.31 122.75 28 E4a_E5a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER5a ExonRegion 0 3.61 0.43 1.00 1.71 0.57 0.76 2.54 2.75 2.36 3.28 0.82 0.00 4.42 0.86 1.31 0.65 0.70 6.62 2.04 2.27 3.29 2.20 1.25