Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP4-756G23.1 Gene 0 7.17 5.52 9.76 23.12 6.44 8.01 5.40 6.46 6.76 5.16 2.17 8.08 15.02 3.21 10.35 9.40 5.86 5.96 5.27 6.77 6.56 3.19 6.53 2 441316 Transcript 0 3.45 2.58 4.99 15.44 3.21 5.11 3.38 3.14 3.93 2.16 1.00 3.87 8.69 1.77 5.78 4.18 2.67 2.91 2.37 4.00 2.96 1.31 4.03 3 451176 Transcript 0 0.00 0.00 0.00 1.88 0.00 1.45 0.00 0.00 0.56 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.79 0.00 0.00 1.48 0.00 0.00 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1b ExonRegion 0 0.00 0.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.55 0.00 0.00 6 E1_Da KnownBoundary 0 3.70 8.62 0.00 3.03 0.00 4.66 12.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 0.00 2.35 0.00 0.00 7 E1a_E1c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1c ExonRegion 0 0.00 0.32 0.90 1.63 0.00 0.80 0.00 0.00 0.00 0.25 0.00 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 1.31 1.17 0.00 1.80 9 E1_Ac KnownBoundary 0 2.89 2.89 2.90 6.96 0.00 15.45 0.00 4.44 4.25 2.44 2.16 0.00 5.68 4.59 4.45 7.78 0.00 6.92 0.00 0.00 0.00 3.12 4.35 10 ER1d ExonRegion 0 1.23 0.37 1.74 5.66 0.51 3.87 0.13 0.00 2.09 1.20 0.60 0.65 2.83 1.36 1.67 1.67 1.21 0.51 0.00 1.17 2.12 0.38 0.54 11 E1_Db NovelBoundary 0 0.00 0.00 1.09 5.86 4.33 7.67 2.25 1.81 3.12 4.03 0.00 0.00 13.31 0.00 0.00 4.10 4.30 2.45 0.00 0.00 8.46 0.00 0.00 12 E1b_E2a KnownJunction 0 0.00 0.00 0.00 12.05 0.00 2.38 4.15 0.00 3.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1b_E3a KnownJunction 0 0.00 0.00 0.00 3.76 0.00 2.90 0.00 0.00 1.13 0.00 2.37 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 2.97 0.00 0.00 14 Ix Intron 0 9.57 2.47 6.05 13.00 3.25 5.26 7.89 6.25 4.06 5.47 2.99 5.82 12.15 2.57 12.28 9.84 6.19 4.56 4.57 9.16 7.05 2.99 10.70 15 Ix_SR1 SilentIntronRegion 0 9.60 2.47 6.06 13.03 3.26 5.27 7.91 6.27 4.07 5.48 2.99 5.83 12.18 2.58 12.31 9.86 6.21 4.57 4.58 9.18 7.07 3.00 10.72 16 E2_Aa NovelBoundary 0 0.00 11.71 5.50 8.66 4.33 11.19 4.33 6.98 5.44 3.09 5.37 18.61 0.00 0.00 5.32 4.36 0.00 6.05 0.00 9.14 13.34 3.12 0.00 17 ER2a ExonRegion 0 11.14 8.50 15.07 30.93 9.27 7.80 7.45 12.31 10.31 9.65 3.21 11.78 17.83 3.80 15.49 17.35 10.03 10.84 10.14 9.56 10.04 5.94 11.02 18 E2_Da NovelBoundary 0 31.34 19.73 13.69 23.57 11.38 2.67 18.99 26.37 16.46 20.98 7.58 6.30 6.33 9.89 8.90 14.87 16.36 16.95 24.75 17.13 20.51 0.00 15.19 19 E2a_E3a KnownJunction 0 0.00 0.00 3.37 19.21 0.00 5.22 0.00 2.18 2.86 0.00 0.00 0.00 6.33 0.00 4.45 0.00 0.00 1.95 0.00 3.26 0.00 0.00 4.01 20 E3_Aa NovelBoundary 0 0.00 5.79 7.21 16.75 46.60 17.89 42.22 22.34 8.30 4.86 4.84 6.00 6.82 0.00 13.35 4.36 0.00 0.00 3.76 0.00 3.09 6.25 0.00 21 ER3a ExonRegion 0 0.96 2.30 6.42 24.94 1.52 8.92 2.25 1.81 5.13 1.78 0.85 2.16 7.26 0.94 1.87 0.25 0.62 1.79 0.00 2.55 4.22 1.57 0.29 22 E3_Da KnownBoundary 0 3.78 0.00 3.43 17.88 0.00 4.77 0.00 2.38 4.40 6.80 0.00 6.30 6.82 0.00 0.00 4.36 0.00 2.20 0.00 0.00 9.39 0.00 4.35 23 ER3b ExonRegion 0 9.56 6.67 10.57 28.81 9.99 14.45 8.68 4.36 6.89 3.04 2.81 11.47 27.97 5.75 14.76 7.74 6.02 4.69 4.07 9.89 6.56 1.90 7.35