Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 Z83844.4 Gene 0 2.58 0.23 2.59 1.10 1.51 0.17 0.81 1.04 1.12 1.69 2.35 0.95 0.65 1.42 3.85 2.88 3.27 0.41 1.08 0.53 1.49 0.56 0.73 2 456099 Transcript 0 1.20 0.19 1.61 1.43 0.70 0.26 0.30 0.61 0.38 0.74 1.57 0.32 0.27 0.64 1.52 1.80 1.36 0.15 0.38 0.10 0.32 0.18 0.75 3 443516 Transcript 0 3.37 0.00 4.60 1.23 2.32 2.11 1.58 3.31 2.28 3.29 11.77 4.06 1.87 4.79 4.27 3.82 7.79 0.55 2.38 1.03 5.82 5.48 2.11 4 ER1a ExonRegion 0 0.00 1.69 1.51 0.00 3.33 0.76 0.55 1.07 0.00 1.30 0.80 0.00 1.60 0.00 2.05 1.23 1.37 0.00 1.32 0.00 0.91 0.00 2.44 5 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E2_Aa NovelBoundary 0 5.56 2.76 24.75 10.99 14.09 19.19 4.77 27.36 16.93 31.51 94.34 46.22 24.51 74.40 46.48 30.76 88.83 5.22 15.81 0.00 70.36 22.66 37.65 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.78 0.34 0.00 0.00 0.00 0.00 0.14 1.45 0.00 0.00 0.00 0.00 0.00 0.92 0.00 1.78 8 E2a_E3a KnownJunction 0 0.00 0.00 1.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.84 0.00 0.00 4.36 0.00 3.16 3.46 0.00 0.00 0.00 6.86 0.00 0.00 9 E3_Ab NovelBoundary 0 9.71 0.00 24.33 5.79 0.00 4.54 0.00 19.84 9.11 19.18 78.76 5.85 6.82 22.19 40.79 14.61 67.98 1.87 3.86 2.36 50.66 7.84 18.44 10 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 1.24 0.08 1.24 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 2.20 0.00 0.00 11 ER3b ExonRegion 0 0.80 0.60 2.87 0.00 0.67 0.00 0.28 0.99 0.79 2.59 4.30 0.00 0.00 0.70 4.49 4.91 1.71 0.81 0.94 0.62 2.60 0.16 0.87 12 E3_Da KnownBoundary 0 3.56 0.00 3.67 0.00 0.00 0.00 0.00 0.00 1.59 1.13 4.42 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 0.00 0.00 2.69 0.00 13 E3a_E4a KnownJunction 0 14.08 0.00 16.00 6.79 11.63 5.05 5.96 15.24 7.52 4.75 17.58 20.41 0.00 24.25 16.94 11.54 4.11 2.57 0.00 2.68 7.66 10.16 7.68 14 ER3c ExonRegion 0 5.55 0.00 5.24 0.99 1.41 0.45 0.10 1.89 1.38 2.52 6.99 1.74 0.00 4.51 6.47 8.29 5.04 0.00 0.78 0.01 0.54 0.89 1.43 15 E3b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 Ix Intron 0 11.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.80 3.87 1.87 4.16 0.00 0.00 0.00 1.39 0.00 0.00 17 Ix_SR1 SilentIntronRegion 0 12.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.95 3.97 1.92 4.26 0.00 0.00 0.00 1.42 0.00 0.00 18 ER4a ExonRegion 0 0.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.50 0.00 0.00 0.71 2.18 0.12 0.00 0.00 0.00 0.00 2.34 0.00 0.00 19 E4a_E6a KnownJunction 0 0.00 0.00 0.00 1.23 0.00 0.00 0.00 0.00 1.07 0.00 0.00 0.00 0.00 2.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E5_Aa NovelBoundary 0 6.59 0.00 2.37 3.50 4.16 0.00 0.00 6.20 3.59 2.71 2.32 0.00 0.00 4.94 0.00 0.00 16.74 1.95 12.71 0.00 0.00 0.00 0.00 21 ER5a ExonRegion 0 2.97 0.00 1.89 2.99 0.00 1.30 0.94 0.26 0.00 0.00 2.85 0.00 0.00 0.11 1.45 2.11 2.34 0.00 0.00 0.00 0.00 0.00 2.08 22 E5_Da NovelBoundary 0 98.02 0.00 1.36 3.26 8.40 7.15 3.97 0.00 1.50 3.92 9.84 0.00 6.82 0.00 6.30 12.48 12.62 1.62 4.80 2.36 11.61 2.76 4.10 23 E5a_E6b KnownJunction 0 0.00 0.00 1.83 5.76 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E6_Ab NovelBoundary 0 31.71 5.39 22.21 5.79 0.00 23.40 13.65 18.07 15.54 14.00 33.48 40.21 24.19 27.96 29.17 44.09 44.97 1.87 0.00 0.00 42.50 18.25 11.52 25 ER6a ExonRegion 0 2.12 0.00 0.09 0.39 0.00 0.00 0.00 0.12 0.00 0.00 0.14 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER6b ExonRegion 0 1.58 0.00 2.03 2.29 1.16 0.00 0.00 2.32 0.00 0.00 1.66 1.44 0.00 0.00 0.00 0.99 0.00 1.29 0.00 0.00 2.27 0.00 0.00 27 E6_Da NovelBoundary 0 16.23 2.43 46.24 27.10 15.87 16.81 12.06 27.40 24.77 33.79 119.66 6.00 17.86 41.09 40.79 28.45 103.41 9.20 3.48 10.10 57.27 20.33 18.78 28 E6a_E9a KnownJunction 0 0.00 0.00 1.09 1.83 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 0.00 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E6b_E7a KnownJunction 0 19.11 0.00 32.14 5.13 11.46 18.11 11.39 17.21 14.90 31.32 101.87 19.96 20.62 19.48 26.45 24.27 74.05 2.07 26.17 8.63 42.63 50.09 13.74 30 ER6c ExonRegion 0 0.00 0.00 1.23 0.00 2.38 0.00 0.00 1.34 0.00 0.00 1.93 4.33 0.00 0.00 0.00 0.00 2.20 1.44 0.00 0.00 0.00 0.00 0.00 31 ER7a ExonRegion 0 1.34 0.00 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.39 0.00 0.00 0.00 0.00 0.00 1.88 0.00 0.00 0.00 1.39 0.00 0.00 32 ER8a ExonRegion 0 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 Ix Intron 0 13.23 0.31 6.06 3.92 5.57 3.82 2.66 4.77 1.99 3.69 11.33 2.44 3.58 7.85 9.26 8.03 8.40 0.78 1.47 1.15 7.48 3.22 5.66 34 Ix_AR1 ActiveIntronRegion 0 19.12 0.00 6.78 1.52 5.99 6.77 1.65 0.64 0.46 2.55 4.81 3.55 4.80 7.72 4.23 5.92 7.39 0.69 0.00 1.06 6.57 2.02 5.11 35 Ix_SR1 SilentIntronRegion 0 10.67 0.46 5.78 5.04 5.42 2.52 3.14 6.68 2.70 4.24 14.39 1.95 3.05 7.98 11.60 9.05 8.94 0.83 2.16 1.20 7.96 3.78 5.96 36 E9_Aa NovelBoundary 0 60.60 3.29 137.64 104.95 41.77 35.43 27.65 104.70 83.33 110.11 625.90 121.84 117.69 319.38 282.96 233.44 432.73 20.02 71.72 29.15 234.38 200.17 152.80 37 ER9a ExonRegion 0 0.00 0.00 1.43 1.29 0.06 0.00 0.00 0.00 0.67 0.00 0.54 0.00 0.00 0.00 0.00 0.00 0.00 1.00 0.00 0.00 0.00 0.00 1.11 38 E9_Da NovelBoundary 0 14.52 0.00 1.60 1.50 4.33 2.90 4.06 5.09 4.89 1.24 6.90 13.95 0.00 5.47 4.45 0.00 4.77 0.00 0.00 0.00 3.15 0.00 0.00 39 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E10_Aa NovelBoundary 0 128.10 12.56 108.63 70.99 26.99 15.90 29.68 80.55 56.57 90.61 423.69 55.07 47.07 313.09 132.27 92.11 357.27 21.10 29.37 24.54 195.71 63.13 80.75 41 ER10a ExonRegion 0 3.53 0.18 3.12 1.46 2.16 0.08 1.43 1.16 1.74 2.38 2.18 1.42 1.12 1.80 5.22 3.08 4.90 0.46 1.72 0.96 1.78 0.94 0.40