Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 Z83851.2 Gene 0 8.18 28.08 55.79 44.39 14.97 15.50 11.14 21.05 15.41 19.33 0.08 0.43 0.31 0.16 0.85 0.36 0.27 11.46 54.75 18.24 14.46 7.46 7.33 2 424852 Transcript 0 6.34 20.22 31.05 26.31 8.90 12.26 7.14 14.74 10.47 12.24 0.00 0.00 0.00 0.05 0.08 0.13 0.00 6.57 36.35 9.42 4.05 4.35 2.93 3 412060 Transcript 0 0.00 0.00 7.57 2.66 0.00 0.00 0.00 0.00 1.22 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 2.39 0.00 4 432473 Transcript 0 3.41 6.94 21.92 12.40 0.00 1.14 1.13 4.79 1.49 5.48 0.00 0.00 0.00 0.00 0.00 0.00 2.38 2.76 33.98 6.30 15.69 2.72 2.18 5 ER1a ExonRegion 0 3.28 7.99 5.62 0.28 1.48 9.93 2.10 0.00 0.94 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.32 12.41 4.18 0.61 3.59 0.00 6 ER1b ExonRegion 0 7.35 15.40 15.81 5.66 4.55 13.16 3.21 5.06 3.40 6.71 0.00 0.00 0.00 0.00 0.15 0.00 0.00 7.16 44.04 7.45 5.67 3.44 2.28 7 E1_Ac KnownBoundary 0 21.19 21.51 32.64 11.99 8.49 8.69 1.85 10.64 5.93 11.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.18 88.28 8.50 10.81 2.69 4.35 8 ER1c ExonRegion 0 5.29 6.99 39.02 22.07 3.89 5.35 1.99 10.76 8.72 10.97 0.77 0.00 0.00 0.00 0.90 0.00 0.00 7.79 43.93 10.54 14.91 2.25 5.10 9 E1_Da KnownBoundary 0 0.00 3.09 51.24 26.90 3.31 0.00 0.00 8.17 13.74 12.57 4.53 0.00 0.00 0.00 0.00 0.00 0.00 10.94 46.87 27.87 16.43 8.27 12.38 10 E1a_E2b KnownJunction 0 0.00 0.00 7.57 2.66 0.00 0.00 0.00 0.00 1.22 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 2.39 0.00 11 ER1d ExonRegion 0 4.68 16.54 58.45 30.52 6.25 13.71 7.10 17.20 13.95 17.42 0.04 0.00 0.00 0.20 0.91 0.00 0.76 12.51 53.68 20.46 24.04 7.50 9.71 12 E1b_E2a KnownJunction 0 3.56 10.85 22.18 19.51 3.74 4.32 2.08 15.03 9.29 7.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 29.93 3.00 0.00 2.51 0.00 13 E1b_E2b KnownJunction 0 6.82 11.84 43.85 24.81 0.00 2.27 2.25 9.57 2.98 10.40 0.00 0.00 0.00 0.00 0.00 0.00 4.77 5.51 67.95 12.59 31.38 5.45 4.35 14 I1 Intron 0 3.21 12.00 13.44 13.18 2.87 4.61 5.34 7.53 5.75 5.85 0.14 0.00 0.14 0.26 0.27 0.11 0.00 9.19 15.08 9.84 4.20 1.62 2.34 15 I1_SR1 SilentIntronRegion 0 1.92 10.32 12.14 12.00 2.45 3.62 4.96 7.25 6.16 5.16 0.24 0.00 0.13 0.28 0.25 0.18 0.00 9.76 14.64 11.07 4.78 1.42 1.98 16 I1_AR1 ActiveIntronRegion 0 7.14 15.45 15.26 13.07 4.09 8.21 5.36 10.63 6.73 8.79 0.00 0.00 0.47 0.20 0.00 0.00 0.00 9.66 27.15 10.78 1.81 2.26 3.62 17 I1_SR2 SilentIntronRegion 0 4.34 14.60 16.05 16.52 3.33 5.24 6.40 6.79 4.45 6.13 0.00 0.00 0.00 0.25 0.45 0.00 0.00 7.86 10.27 6.70 4.20 1.82 2.58 18 E2_Aa NovelBoundary 0 22.30 34.07 13.07 18.58 3.40 17.72 16.74 8.26 6.16 7.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 16.75 12.02 2.47 0.00 4.10 19 ER2a ExonRegion 0 12.17 41.81 65.34 59.13 21.50 22.55 17.25 29.17 21.17 27.29 0.00 0.00 0.00 0.16 0.25 0.40 0.01 17.56 66.70 21.06 11.54 6.95 8.80 20 E2_Ab KnownBoundary 0 7.56 47.10 45.50 69.19 24.79 16.64 14.84 21.40 14.38 26.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.81 71.25 32.15 11.37 9.37 4.27 21 ER2b ExonRegion 0 7.79 37.82 77.67 72.46 25.13 12.79 15.55 30.52 19.07 23.17 0.00 2.19 1.83 0.34 2.32 1.43 0.36 8.28 65.44 24.41 16.16 15.13 7.28 22 E2_Da KnownBoundary 0 6.22 28.09 35.07 41.02 17.49 17.26 5.70 15.28 10.10 12.17 0.00 6.30 0.00 0.00 5.07 0.00 0.00 2.11 43.86 17.64 5.00 14.21 0.00 23 ER2c ExonRegion 0 9.07 25.64 20.88 30.76 17.21 12.26 7.43 8.32 7.39 7.32 0.00 0.88 0.23 0.00 0.75 0.00 0.00 0.36 23.57 6.40 0.86 3.69 1.22 24 ER2d ExonRegion 0 0.00 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00