Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP3-508I15.6 Gene 0 16.09 46.33 43.54 66.15 18.79 35.75 12.55 17.93 18.08 30.94 3.63 13.32 12.60 9.72 10.32 11.09 9.45 54.25 34.62 49.88 14.15 10.44 14.09 2 444381 Transcript 0 12.88 29.18 22.11 33.22 10.45 25.66 11.40 8.50 7.79 15.82 2.53 7.43 6.93 4.46 3.67 7.12 9.87 30.26 21.43 28.43 12.56 6.54 11.80 3 412067 Transcript 0 6.38 26.07 27.04 35.25 12.19 22.80 3.50 7.18 12.51 23.74 1.60 5.46 3.60 8.35 5.95 5.52 10.22 50.00 33.17 46.43 9.63 7.88 11.74 4 431924 Transcript 0 4.10 7.80 11.43 11.88 4.22 4.79 4.76 5.46 3.53 6.59 1.62 14.04 3.44 6.80 10.02 4.32 5.81 15.95 9.20 12.07 4.20 6.82 6.59 5 422408 Transcript 0 2.72 25.03 25.45 38.27 6.29 12.24 4.10 9.22 6.74 10.97 2.08 7.64 4.07 4.74 3.95 9.74 1.20 20.56 7.53 25.82 9.63 2.32 3.74 6 ER1a ExonRegion 0 16.19 23.39 16.36 16.72 1.50 29.83 14.76 1.47 1.93 10.69 3.41 3.31 0.00 2.29 0.34 7.43 21.94 42.77 38.41 40.74 24.18 6.50 23.84 7 E1_Ab KnownBoundary 0 33.78 53.28 13.51 24.31 7.81 65.98 20.01 2.34 1.65 16.22 5.11 6.30 0.00 2.35 0.00 15.30 42.17 73.91 66.35 55.86 40.03 9.25 58.30 8 E1_Ac KnownBoundary 0 2.82 25.46 30.78 37.62 3.31 30.27 13.38 4.76 6.68 18.13 2.16 0.00 0.00 6.95 8.90 7.52 4.77 100.11 31.91 56.37 6.24 5.82 11.69 9 ER1b ExonRegion 0 22.91 38.28 24.51 26.06 4.56 46.92 22.51 1.73 2.47 16.06 5.12 4.07 0.00 6.02 6.14 14.86 30.48 66.30 62.96 71.96 32.41 12.50 38.69 10 ER1c ExonRegion 0 8.32 19.78 25.06 23.79 13.32 17.34 6.02 1.49 2.02 16.32 2.59 2.46 0.00 12.33 5.47 11.82 13.50 56.02 26.42 33.66 10.17 9.38 16.49 11 E1a_E2a KnownJunction 0 0.00 6.58 5.06 3.33 10.70 7.89 0.00 0.00 1.27 9.32 0.00 0.00 0.00 4.77 0.00 3.59 3.93 9.70 0.00 5.31 0.00 5.27 0.00 12 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E5a KnownJunction 0 0.00 6.58 6.50 0.00 0.00 0.00 0.00 0.00 0.00 1.64 2.21 6.30 0.00 0.00 0.00 0.00 4.39 8.33 9.04 0.00 0.00 2.69 4.18 14 E2_Aa NovelBoundary 0 11.11 22.56 26.85 58.03 3.65 4.77 6.76 13.92 11.95 26.06 4.90 6.30 0.00 11.83 4.45 11.96 12.06 8.79 24.94 35.79 5.50 3.12 3.50 15 ER2a ExonRegion 0 12.76 45.56 49.02 67.16 13.68 37.71 6.99 14.37 23.74 38.16 3.21 10.91 7.20 11.93 11.91 7.45 16.50 90.29 66.34 87.56 19.26 10.50 23.48 16 E2_Da NovelBoundary 0 17.63 83.01 77.35 124.09 4.33 42.70 16.21 24.64 36.83 53.37 2.42 0.00 19.32 12.01 9.64 11.62 8.60 123.86 92.05 113.01 6.12 15.12 42.25 17 I2 Intron 0 11.47 39.13 44.57 75.62 12.00 31.52 8.33 10.11 19.83 31.51 2.65 7.71 3.68 4.84 6.76 8.88 12.13 72.48 40.06 64.00 13.45 9.47 17.19 18 I2_SR1 SilentIntronRegion 0 12.10 41.30 47.04 79.81 12.66 33.26 8.79 10.67 20.93 33.25 2.79 8.13 3.88 5.10 7.13 9.38 12.80 76.50 42.28 67.54 14.19 10.00 18.14 19 Ix Intron 0 25.10 50.65 42.59 69.65 29.36 42.23 19.11 21.38 21.65 21.96 6.50 9.57 6.57 10.29 11.22 12.34 9.79 51.11 31.17 44.37 16.11 9.27 16.83 20 Ix_AR1 ActiveIntronRegion 0 32.21 64.97 54.77 89.43 37.68 54.26 24.41 27.43 27.85 28.21 8.36 12.28 8.46 13.24 14.17 15.88 12.50 65.70 39.95 56.81 20.69 11.89 21.60 21 E3_Aa NovelBoundary 0 7.56 78.34 99.49 122.50 90.41 88.30 47.56 44.77 38.57 67.72 10.58 12.60 0.00 34.55 18.30 20.76 17.95 90.78 52.71 85.71 39.66 5.27 31.16 22 ER3a ExonRegion 0 22.47 64.16 49.98 82.93 29.85 47.14 19.43 24.03 21.44 36.77 4.17 18.99 20.78 11.08 10.67 13.93 7.66 48.01 25.88 44.54 13.52 13.14 11.57 23 E3_Da NovelBoundary 0 55.27 72.42 53.72 120.93 40.92 41.11 17.00 42.51 45.34 41.02 4.53 31.36 21.75 16.25 10.38 27.94 4.77 33.16 54.03 34.90 9.20 24.86 0.00 24 E4_Aa NovelBoundary 0 874.53 1024.42 773.57 996.24 949.75 713.40 1139.22 786.90 689.81 700.43 358.83 625.85 541.85 414.09 505.47 840.21 837.96 1205.17 581.48 1084.61 658.42 383.81 761.35 25 ER4a ExonRegion 0 5.44 32.04 30.43 42.71 8.26 16.14 8.20 12.04 12.07 18.10 4.17 9.59 8.14 7.37 7.90 19.49 2.40 28.11 15.06 37.58 11.29 2.13 7.49 26 E4_Da NovelBoundary 0 14.89 46.57 53.69 57.93 22.92 8.12 12.50 19.88 25.69 19.07 7.21 6.30 20.45 2.47 23.98 14.87 17.77 70.06 77.27 32.60 37.38 8.63 22.62 27 E4a_E5a KnownJunction 0 0.00 18.02 20.46 33.83 4.33 8.35 0.00 6.41 1.42 3.84 0.00 5.70 0.00 2.12 0.00 0.00 0.00 13.02 0.00 14.06 7.97 2.51 0.00 28 Ix Intron 0 11.72 31.51 48.67 59.31 12.30 22.32 12.06 23.90 20.37 24.30 9.22 11.15 16.25 12.72 15.21 22.52 18.55 69.38 32.82 33.15 23.64 9.76 13.50 29 Ix_SR1 SilentIntronRegion 0 11.74 31.56 48.74 59.41 12.32 22.36 12.08 23.94 20.41 24.34 9.23 11.16 16.28 12.74 15.24 22.55 18.58 69.50 32.87 33.21 23.68 9.77 13.52 30 E5_Aa NovelBoundary 0 28.00 26.77 44.23 98.86 19.27 44.35 8.39 20.91 36.08 32.42 9.79 6.15 0.00 15.72 47.10 39.39 18.79 78.47 59.30 51.96 17.11 14.39 36.45 31 ER5a ExonRegion 0 8.26 11.55 28.79 39.27 3.10 12.21 4.00 12.60 6.80 13.58 2.87 4.44 3.10 3.76 8.50 6.59 4.10 28.49 18.70 15.99 8.61 5.99 7.56 32 E5_Da KnownBoundary 0 28.08 28.15 76.87 101.49 40.41 27.14 26.81 35.78 30.96 38.76 2.16 37.36 15.10 26.84 54.27 25.46 21.51 67.65 35.48 56.12 18.53 23.64 19.89 33 ER5b ExonRegion 0 8.20 9.02 16.35 23.77 8.45 9.57 9.52 10.91 7.06 11.54 1.03 21.78 6.89 13.60 20.04 8.64 7.22 23.56 9.36 24.14 8.40 10.94 8.99